Mya arenaria (softshell): 128234141
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Entry
128234141 CDS
T09995
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
maea04054
]
128234141
Pattern recognition receptors [BR:
maea04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128234141
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR_2
TIR
LRR_4
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
128234141
NCBI-ProteinID:
XP_052804139
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Position
5:complement(33839733..33842693)
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AA seq
874 aa
AA seq
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MELDNYMFVLAVLIVHVNISMSFSRCGPELKCSCMTSPSGTIAMDCKARKVNIRQVCESI
AQIYPNVSDLNIARNNIGNFNAEDVNCCRNISSLNMNYNQISSLHSGVFKDFQNILALDL
SDNVLDIFNKTAFDPGVFPSTLRILKLFGNFPEDNEIERSFDYPNLTKLQKLEVLQMDGI
ETDIGLEYENSSVRNLTLSSKGPLGFCSIKEIFPTTFYSLVNVRVLDISSCKIENIYRDA
FKNMVSLEILDLSLNRRLGFSSLMNVSYSLQFTNIQFLNYSRVYTTFGVGTIILNRDVCY
LRNTSLKAIAFDGNKVQMVEKNTFVLLPKHLETIYGQENKFSFGLYLFQFGCLENVLRID
TNNQNKVHAPIKYLAEPKSKDDNDRSRDSECQYMTEESLKTIAKEIPDCTYVPPNETAAD
LKPQFSRSLKRVYFSGCNMVYNLDKTKITINPKNNSLEVLDFSKNTYPSLRGRIGPFPNL
KFLSFSRSYCSFISSDCLSMDKLENLQLDRNYLGGMFAHPGGGDTFEYLTNLKTLNLSTN
RISHLKRSLFSRLGKIEEIDLSGNSIEHFDIDVQPLKNLLYLKFRCNALHTLNKDITQLL
EDNSERIGNNFTLDLRNNSIEYSCSNQNFLYWLVDHKERLQGFHEMVFYRLNGSSVDSIG
FLRDVPHLRAQCRSYTVAIVLSAFSVLSACAIIFGVILYKKRWKLRYWYYMKKQSYFGYR
RLVNDDEYENYRYDAFISYSDHDLHFIRDDIIPRLEDRGMKLCVHQRDFLPGIPIRDNIV
DAIRTSKKTVVILSKAFIKKQWCIFEFNMARMESIGNRECENGCLVIVLYENVPTKELPL
EIMDWMDNHSYISYTRDPDGQPLFWKNLTTAIER
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atggagttggataattatatgttcgttctagcagttcttattgtacacgtgaacatctcg
atgagcttttctagatgtggacccgaactaaaatgttcttgcatgacgagtccatcagga
acaattgcaatggattgtaaagcaagaaaagttaacattcgtcaggtctgcgaaagcatt
gcgcaaatatacccaaatgtgtcggatcttaatattgcacgaaataacattggtaacttt
aatgccgaagacgtgaactgctgtcgaaacatcagtagtttgaatatgaattacaaccag
atttcgtcactgcatagtggtgtctttaaggattttcagaatatattggcccttgatttg
agcgataacgtgctcgatattttcaacaagacggcgtttgacccaggggtttttccatca
actctaagaatcctcaaactatttggcaattttccagaggataacgagattgaaaggagc
tttgactacccaaatctcactaaattacagaaacttgaggtgttgcagatggatgggatt
gaaacagatattggtctggaatatgaaaacagcagcgtcaggaatttaactctatcatca
aaaggacctttgggtttctgctccataaaggaaatctttccgaccacattttactcgctt
gtaaatgtacgtgttctagatatatcctcgtgcaaaattgaaaatatttacagagatgcc
tttaaaaacatggtgagtcttgaaatcctagacctttctttgaacagacgtcttggattt
agctccctgatgaacgtttcctattcgcttcagtttacaaatatccagtttctgaattac
tcacgggtttatacaacatttggcgttggaactataattctgaacagagatgtatgctac
cttcgaaatacatctctgaaagcaattgcatttgatggcaacaaggtccaaatggtagaa
aagaacacctttgtgttacttccgaagcacttggaaacaatttacgggcaagagaataaa
ttctcttttggattatacctgtttcaatttggttgcctggaaaacgttctacgtattgat
acaaataatcaaaacaaagtgcacgctcctattaaataccttgcggaacccaaatcaaaa
gacgacaacgatcgaagcagggattcggaatgtcaatatatgacggaagaaagtttgaag
accattgcgaaagaaatccctgactgtacgtatgttccaccaaatgaaacagctgctgat
ttgaaaccacagttttctaggtctctcaaaagagtttatttctccggctgcaatatggtt
tataaccttgacaaaacaaaaatcactataaatccaaaaaataactcattggaagtattg
gatttttcaaaaaacacttatccttccttgaggggcaggattggtccatttccaaatcta
aagtttctgtcgttctcacgttcttactgttcattcattagttcagactgtttgtcaatg
gacaaacttgagaatcttcagctagatcgaaattatttgggaggaatgtttgcacatccg
ggaggtggagacacgtttgaatatctaaccaatttgaaaacgctaaatctgtcaacaaac
cgcatttcacacctcaaacggagtttatttagtcgtctcggaaagattgaagaaattgac
ttaagcggaaacagcatcgaacattttgacattgatgtacagcctttaaaaaatctgctt
tatttgaaatttcgatgtaacgcacttcatacgcttaataaagatataacgcaacttctt
gaagacaattcagagcgaataggaaataattttactctggatttgcgaaacaattcaatc
gaatacagctgtagcaatcagaattttttgtactggttggttgatcataaagaaaggtta
caaggttttcatgagatggttttctataggttaaatgggagctctgttgattcaattgga
tttctgcgcgatgtgccccacttgcgtgcacaatgcagatcatatacagttgcgattgta
ctgtccgcgtttagtgtattgtcagcctgtgcaattatatttggagtcattttgtacaaa
aagagatggaaacttcggtattggtactacatgaaaaagcaaagttattttggctaccgg
cgactagtaaacgacgatgaatatgaaaattaccgatatgatgcatttatatcttattca
gaccatgacttacattttattcgagacgatataataccaagattggaagacagagggatg
aagctgtgtgtccaccaacgggattttctaccaggcataccgatacgggacaacatagtg
gatgcgatacgcacaagcaagaaaacagtggtgattctctctaaagcttttataaagaag
cagtggtgcatatttgagttcaacatggcacgaatggaaagtattggcaatcgagagtgc
gagaatgggtgtttagtaattgtactgtacgagaatgttcccacgaaagaattaccgtta
gaaataatggattggatggacaatcattcgtacattagttatacacgcgatccagacggg
cagccattgttttggaaaaatttgaccacagccattgaacgttga
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