Mya arenaria (softshell): 128234331 Help Entry 128234331         CDS       T09995                                  Name (RefSeq) collagen alpha-1(I) chain-like   KO K19719   collagen type II alpha Organism maea  Mya arenaria (softshell) Pathway maea04512   ECM-receptor interaction maea04518   Integrin signaling Brite KEGG Orthology (KO) [BR:maea00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     128234331    04518 Integrin signaling     128234331  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:maea00536]     128234331 Glycosaminoglycan binding proteins [BR:maea00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    128234331 SSDB OrthologParalogGFIT Motif Pfam:  Collagen COLFI Motif Other DBs NCBI-GeneID:  128234331 NCBI-ProteinID:  XP_052804466 LinkDB All DBs Position 5:complement(39205887..39230810) Genome browser AA seq 1340 aa AA seqDB search MTAQTVPWALLCLAALAAVTSAQEGVRGQNQFEESMLSNQQDIAVADEKAGPAYAAQPMG MGMVSGVPGPRGPIGPPGQPGPQGFPGPRGEPGDQGPPGSTGPRGTPGPMGPSGLDGDEG LMGETGPPGPTGNPGDSGRPGIPGLPGPKGHRGMPGRQGTRGLEGRSGDKGEAGPVGAPG TTGPIGPAGAPGERGRDGSQGASGLPGTDGKSGERGPPGNIGPPGPPGFPGANGAKGDAG QNGPRGLIGLPGPDGQNGSPGQPGEPGPSGMPGVDGDPGSKGDQGNAGQSGATGFPGPQG PPGLSGAAGAPGPKGESGKDGLPGATGEPGTRGSPGNTGDRGLPGLAGSPGNRGPVGAQG TPGPSGNQGEPGAPGMQGVPGASGPPGIPGHDGERGPDGERGEQGAPGQQGSMGPVGPTG PRGISGPSGNDGRPGPTGSPGPAGESGKDGEQGTQGPPGMPGSSGMPGPKGDQGSDGRSG ESGPPGPQGRRGERGIQGEQGIIGQPGTGGPSGEVGEPGRQGEQGIAGPLGPPGVPGESG RAGEPGETGPSGEPGAPGERGNSGFPGEPGSPGQRGASGERGPQGVPGESGPEGPDGPPG PRGEPGTQGLSGLPGEPGPPGSVGLKGNRGSPGSRGNDGVPGESGVMGPVGPPGQTGPQS FIKPEKGDRGVSGEPGSPGVPGEGGVMGFAGETGSVGAPGPSGPPGEPGAPGETGVPGMR GDRGNPGYTGEQGIRGEPGLPGGEGRKGGRGDQGQVGLTGTPGSPGRQGPTGVDGEPGSV GSPGATGSPGPIGSRGEVGPPGPPGKDGAPGLNGQDGQTGDRGNTGPQGLTGPPGVPGPQ GERGMTGFPGLQGAQGPSGPSGEPGMPGEEGRNGADGKPGLPGAPGPMGLTGFEGEQGPP GPAGQDGGPGAPGRPGEKGDSGSVGQPGLQGQPGPQGPPGASGMAGAQGERGERGERGGS GPMGAPGNQGPQGAPGSNGEKGDAGRQGGKGDKGWPGMPGLQGPPGPPGPSGESGRQGPQ GPPGPQGQAGSRGSNGKDGPQGPVGSPGLSGPRGPQGNDGPQGQSGPAGPPGPPGPPAYA PQYQQAAYANNYKGPADWESGYQYDQPQADMAPEPDEDVLVNLNFILNAIDSMRRPLGTK AAPGRSCEHIRRTSTLALKDHGEFYIDPSDGSFDPIKVNCIFHERYAETCISSQTQFGDY QKFKGRTTAVWMSEHATGKELKYTMPSRQLAKLQLDNDIATQTFTFRCQNTLIAGAQMMA NDENVQFIDTSSPRYLSSTYIEKIADDCSMDTNKWGKAVYKLTTKRPAVLPVTDILLYPV GDENQKVELQVGEVCFRHDL NT seq 4023 nt NT seq  +upstreamnt  +downstreamnt atgaccgcgcaaacagtgccttgggcactgctctgcctcgccgccctggctgcagtgacg tccgctcaagaaggagttcgaggacagaatcaatttgaagaatctatgctatcgaaccaa caggacatagctgtagcggatgagaaagcaggaccagcttacgctgcgcaacccatgggc atgggcatggtatcgggcgtgccgggaccacgtggacccatcggaccgcccggacaaccg ggccctcagggattcccgggaccacgcggagagcctggagaccaaggaccgcctggctca acaggcccgcgcggtacccctggccccatgggaccttcaggcttggatggtgacgagggg ctgatgggagagaccggcccacccggacccaccggaaaccccggagactccggccgccca gggatcccaggacttccaggaccgaagggacatcggggtatgcccggccgccagggaaca cggggattagagggacgttccggagacaagggagaggctggcccagtaggcgctccgggc actacaggacctatcggaccagcgggcgctcccggcgagcggggaagggatggctctcag ggcgcctcgggattgcccggtacggacggcaaaagcggagagcgtgggccaccgggcaat atcggaccacccggacctccaggattcccgggcgctaatggcgccaagggagatgcagga cagaacggaccacgtggattgatcggtttacccggcccggacggccaaaacggaagcccc gggcagccaggagagccagggccctcaggaatgccaggtgttgacggggatccaggctca aagggtgaccagggcaacgcaggacagagcggcgcaacgggtttccccggaccacaggga ccaccgggactctcaggggccgctggggcgcctggacccaaaggagaatctggcaaggac ggacttccgggcgccactggggaaccaggcacgcgtgggtcgccaggaaatacgggcgac aggggccttcccggtcttgccggctctccaggaaacaggggcccagttggagcacaagga actcccggaccttcaggaaaccagggagaaccgggagcaccaggtatgcaaggcgtgcca ggggcatcgggacccccgggcatccccggccatgacggagaacgcggacctgacggcgag aggggcgagcagggtgcaccgggccaacaaggctcgatgggaccagtaggaccgaccgga cccaggggtatctctggcccttccggaaacgacggccgcccgggacctaccggttctccg gggccggcaggcgagagtgggaaggacggtgagcaggggacgcagggaccgccaggtatg ccggggtcatccggaatgccaggacccaaaggagaccagggatcagacgggcgatcaggt gagagcggacccccagggccacagggacgaagaggcgagagaggaatccagggcgagcaa ggaataatcggacaaccgggaacaggcggaccgagcggcgaggtcggggagccgggcaga caaggagaacagggtattgctgggcccttaggaccgcctggtgtgcctggtgagagcgga agagccggggagcccggagagacggggccgtcaggagagcctggcgcgccgggggaacgg ggtaactcaggttttccgggcgagccaggatcccctggacagaggggcgcctcgggtgag cggggaccgcagggtgtgcctggggaatcgggaccagagggaccggacgggcctcctggg ccacgcggtgagccaggtactcagggactctctggattacccggcgagccgggaccaccg ggaagtgtaggactcaaaggaaaccgaggttcgccaggcagtcgcggaaacgacggagta ccgggtgagtccggcgtcatgggcccggttggacccccggggcaaacggggcctcagtcc ttcatcaaaccggaaaagggcgaccgcggtgtttccggggagccgggttctccaggtgtt cctggcgagggcggcgtcatgggtttcgctggagaaacgggatcggtcggtgcacctggg ccctcgggtccgccaggtgagccaggagctcccggagagacgggcgtgccgggaatgaga ggagaccgcggtaatccaggctatacaggtgaacaaggaattcgcggagaaccgggcctg ccaggcggggagggacgcaagggaggacgcggcgatcaggggcaggtggggctgacggga accccgggatccccaggacgccagggaccaaccggtgtggacggcgaacccgggtctgtg ggatccccaggggcaacgggctctccaggacctattggctcacgaggagaagtcggaccg ccaggcccgcctggaaaggacggagcaccggggctgaatggccaggacggacagacgggc gacagaggaaataccggaccacagggactgacgggcccaccaggtgtgccagggccgcaa ggagaacgcggaatgacaggattccctggcctccagggcgcccaaggaccatcaggacca tcaggagaaccgggaatgccgggcgaggagggccggaacggtgcagacggcaagccagga ctcccaggtgctccaggaccaatggggctaaccggatttgagggagaacagggaccacca ggaccagcgggtcaggacggcggaccaggcgctcctgggcggcctggagaaaaaggcgac agcgggtccgttggacagccaggcctccagggtcaacccggaccacaaggaccccccggt gcaagtggcatggccggggcacagggcgagcgcggggaacgaggtgagcggggaggttcc ggtcccatgggcgctccaggaaaccagggtccacagggtgcccctggctctaatggcgag aaaggtgatgctggacggcaggggggaaagggcgacaagggttggcctggtatgcccggt cttcaaggaccaccaggaccgcctggcccctcaggggagtcaggccggcaaggacctcag ggaccacctggaccacagggccaggccggctcccgaggctcaaacggcaaggacggaccg cagggaccagttggatccccaggactcagtggaccacgcggtccacaaggtaacgacggc ccacaaggtcaatccggcccagcaggaccaccaggaccaccaggcccacctgcatacgcg cctcagtaccaacaggccgcatacgctaacaactacaagggacccgccgactgggagtct ggttatcagtatgaccaaccacaggctgacatggccccggaaccggacgaggatgtactc gtgaacctgaacttcattctgaacgccatcgattctatgaggcggccgctaggcaccaag gcggcaccaggacgctcgtgtgaacatatccgccgcactagcactctggcgctcaaagac cacggtgagttctacattgaccccagtgacggcagttttgatccaatcaaagttaattgt attttccacgagagatacgctgaaacgtgcatctcgagccaaacacagttcggagattac caaaagttcaaggggcgaacgacggcagtttggatgtcggagcacgctaccggaaaagag ctgaagtacactatgccgtcgagacagttggctaagctacagctggataatgacattgcc actcagacgttcacgttccgctgccagaataccttgattgccggcgcccagatgatggct aacgacgagaacgttcagtttatcgatacctcctcaccccgatacctcagctccacttac atagaaaagattgcggacgactgctcgatggacactaataagtggggtaaggccgtgtat aagctcacgacgaagcggccggcagttcttccggtgacagatatccttctgtatcccgtg ggtgatgagaaccagaaggtggagctgcaggtcggagaggtctgcttccggcacgacctg taa

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