Mya arenaria (softshell): 128234384
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Entry
128234384 CDS
T09995
Name
(RefSeq) neurexin-4-like isoform X1
KO
K07380
contactin associated protein-like 2
Organism
maea
Mya arenaria (softshell)
Pathway
maea04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
128234384
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
maea04990
]
128234384
Domain-containing proteins not elsewhere classified [BR:
maea04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
128234384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
EGF
Laminin_G_3
F5_F8_type_C_2
hEGF
GH123_N
Syndecan
Motif
Other DBs
NCBI-GeneID:
128234384
NCBI-ProteinID:
XP_052804555
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Position
5:complement(76549004..76572306)
Genome browser
AA seq
1324 aa
AA seq
DB search
MARLKIFSCLLIFIFINIDVSHSARNRSPFQYQECRLDRSLGVGKDSISQSAPTVPDSAL
WGSSFTTDRRMPHMARLEDPTGAWTASVQNSQQFLGVDLGSEYIVTQVYTQGRQGSDEFV
TEFTLEFSMDNKTWAEYTNELGLPEIFPGNSDGNAVKKNSLMFPVIARYVKFSPQRWNQF
ISMRIDVLGCPYYTEAVKVASNGYITYSLMNVATRTESDLIIMRFRTINPEGVLLYADGN
QGDYIALQLKRGYLHFTIDLGSTPQVSGETSIVGASMLDDGRWHDLIITRNRTTCVLIVD
RLESRFEAQGLFYRLDLDKMIYLGGVDTFNKKGLSTRYNFDGCIDFVRFNGIAMLKDALA
QGQIPGRFQTVGPVSAGCAIRPDVPITFTSLESYISVSGAASTGGTVRVKFQFRTHDEDG
LLMYHQMSSEAEVRVRLDRDGFVHYNVKTSDKDVAVEDVVRNIDIESPTQSFTDGLWHTF
EIYIDTEKVNVTVDRNVKVSTRTMNIIPGTDFFIGGSQLHAGFRGCMRNIAVANQPIDFT
NQLAVQLKLETNLVTMGSCSITDRCTPNPCEHNGFCTQDWNNFYCNCENTGYKGAVCHIS
QFQLSCEMHSQYTIMDGQEEVTIDPDGSGPIEPFKVICNGKTGSSVPVETWIRHDSMGLI
TVNGFQAPDYYVRKINYDTGLMGLTEVIERAVSCKQEITYKCNNSKLMGTLESGTVDQFG
FQKTYGYWVGRTFQDMHYWGGSAPGTYKCECGLTEEGCNDNSKSCNCDSLKDTSDSGLLL
HKDYLPVLELHFGDTGSLTDTKIGQHELKELKCAGDNMLDNVITFRKKDATLEFPTFEGD
KAGDIWFQFKTTAPDGIMIHDTGETENDFIQIRMINGDTVQFRYNVGNGIQVIEYKTING
LANDIWHTVHVERNRKQTWLRVDNFPEVVHNEQQDEITRLLELTKPLTVGAAVDHRDGYV
GCMRGLRVNGVLMDMRGKITRGEETYGVHEGCVGKCASNPCFNHGTCQEGYDHYTCDCAY
TPFRGWMCFREVGVNLQPNYKIKYTFDELQGLSSSDFLYIRVGFITKKKQGILIQLRNEA
NTEYISLEINNNGGIKFFLSVGFQPWELNTLNNNIDLTNGQAHEVIIRRENGGKDVYLQV
DNYEPVTKKLGEDISDTILDNPKYLFIGNNDTANTAKGFEGCIYRMQIDNIFPLKRAFQD
PQPSFIEPEPEDKIREDMCGFEEITRESDPIEVRPYGPTYVNLTLPPPPQDRSEEKRTIV
GVTVAGAFLIFLVILLVFFIYFRQKGDYETKEAKGQENADNPDAAIVFCNTGVPEISKRQ
EWFM
NT seq
3975 nt
NT seq
+upstream
nt +downstream
nt
atggctcggcttaaaatatttagttgtttattgatatttattttcataaatattgatgta
tcacatagtgcaaggaacagatcaccattccagtatcaagaatgccggttagaccgatct
ttaggggtcgggaaggattcgatctcacagagcgccccaacggtgcccgactctgccctg
tggggttcctcattcacaacagatcgtcgcatgccccacatggccaggcttgaagaccca
acaggggcatggacagcatcagtccagaactcacagcagttcttaggcgtagatctagga
tctgagtacattgtgacgcaggtctacactcagggtcgacagggcagcgatgagtttgtt
acggagtttacgcttgagttctctatggataacaagacatgggcagagtatacaaatgag
cttggtcttcctgagattttccctgggaactctgatggtaatgcagtaaagaagaattct
ctgatgttccctgtgatagctcgctatgtaaagttctcaccacagcgatggaaccagttc
atctccatgaggattgatgtgcttggttgtccatattacacagaagcagtgaaggtggcc
tccaatggctacatcacatactcgctgatgaacgttgccacacggacagagtcagacctg
attatcatgaggttccgaactatcaaccctgagggagttcttttatatgctgatggtaac
caaggagactacattgccctgcagttgaagcgaggatacctacacttcaccattgacctg
ggctccactccccaggtatcgggagagacatctattgttggagctagtatgttggatgat
ggacgctggcatgacctcattatcactcgtaaccgaaccacgtgtgtactgattgttgac
aggctggagtcgcgcttcgaagcccagggtctcttctataggctggacctggataaaatg
atctaccttggaggagttgacacctttaacaagaagggcctttctactcgctacaacttt
gatggatgtattgactttgtccgctttaacggaattgccatgttgaaggacgcccttgcc
cagggtcaaatcccaggaagattccaaactgtgggccctgtttcagctgggtgcgccatc
cgaccagatgtgccaatcacatttacttcccttgaatcctacatctccgtctccggcgct
gcctccacaggtgggacagtgcgtgtcaaatttcaatttcggacccatgacgaggatggc
cttcttatgtaccaccagatgtcttctgaagccgaagtcagggttcgattggaccgagat
ggatttgtccattacaacgtcaagacaagtgacaaagatgtggctgtggaggatgtggtc
agaaacattgacattgaaagtcccactcagtcgttcacggatggtttgtggcacacattt
gagatctacattgacacagaaaaggtgaatgtgactgtggacaggaacgtgaaggtctca
accagaacaatgaatatcattccggggacagacttcttcattggtggttcacagttgcat
gctggattccgtggctgcatgcgtaatattgctgtcgccaaccaacccatcgatttcact
aatcagttggccgttcagctgaaacttgagacaaacctcgttacaatgggctcatgcagt
atcactgaccgatgtacacccaacccgtgtgaacataacggcttctgtacgcaagactgg
aacaacttttattgtaactgtgaaaatacaggttacaaaggggctgtttgccatatctcc
cagttccagttatcatgtgagatgcacagccagtacacgatcatggacggccaagaggaa
gtgactattgaccctgatggttctgggcccattgaacctttcaaggtcatctgcaatggc
aaaactggttcctcggttcccgtggaaacctggatccgacatgacagcatgggcctgatc
acagtgaatgggttccaggcgcctgattattatgtgcgtaagatcaactatgacacaggc
ctgatgggcctcacagaggtgatagagcgagcagtcagctgtaaacaggagatcacatac
aagtgtaacaactctaaacttatgggcaccctggaatctggcacagttgaccagtttgga
ttccagaagacgtatggttattgggtagggagaacattccaggatatgcattactgggga
ggctcagccccgggaacttacaaatgtgagtgtggactgactgaggagggatgtaacgac
aacagcaagtcatgcaactgtgacagcctcaaggacacgtccgacagcggcctcctgctt
cacaaggactacttaccagtgctggagctacattttggtgacacgggaagtctaacagac
acaaagattgggcaacatgagctcaaggagttaaagtgtgctggagataacatgttggac
aacgtgatcacgtttcgtaagaaagatgcgactctggaattcccgacattcgagggcgac
aaggcgggtgacatctggtttcagtttaagacaactgcgcctgatggcatcatgattcac
gacacaggggaaacagagaacgactttattcaaattaggatgatcaacggtgacactgtc
cagttccggtacaacgttggtaacggtatccaggtgattgagtacaagaccatcaacggt
cttgctaatgacatctggcacacagttcacgtggagagaaacaggaaacagacatggctc
cgtgtagacaacttcccagaggttgtgcataatgaacaacaggatgagatcacccgactg
ttagagctgacaaagccgttgacagtaggtgctgctgttgaccaccgtgatggctatgtt
gggtgtatgcgtggtctacgggtgaacggtgtgctgatggacatgagaggcaaaatcaca
cgaggagaggaaacctatggtgttcatgagggctgtgttggaaagtgtgcgagtaatccg
tgcttcaaccatggcacgtgccaggagggatatgaccactacacatgcgactgtgcatac
acaccattcagaggctggatgtgtttcagagaggttggtgtgaacctgcagccaaactac
aagatcaagtacacgtttgatgagctgcaaggtctgtcctcctctgacttcctgtatatc
cgtgtgggcttcatcacgaagaagaaacagggcatcctaatacagctccgaaatgaggct
aacaccgagtacatctctctggagatcaacaacaatggtggtatcaagtttttcctgagt
gttggttttcagccatgggagttgaacacactgaacaacaacattgacttgaccaacggt
caggcccatgaggttattattcgacgagaaaatggtggcaaggatgtgtatctgcaggtt
gacaactacgaacctgtcacgaagaagcttggagaagacatctctgataccattctagac
aatccaaaatacctctttattggaaacaatgacacggcaaacacagcgaagggtttcgag
ggttgtatctaccgtatgcagattgataacatcttccccttaaagagagccttccaggac
ccgcaaccttccttcatcgagcccgaaccagaggacaagatccgggaagacatgtgtggt
tttgaggagatcacacgagaatcagatccaattgaggtgcggccgtacggaccgacatat
gtgaatctcacactcccacctcccccgcaggaccgctctgaggagaaacgaaccattgtc
ggagtgactgttgccggggctttcctcatcttcctagtcatcttgctcgtgttcttcatc
tacttccgccagaagggcgattatgaaactaaggaagcgaagggccaggagaatgcagac
aatcctgacgcagccattgtattttgcaatactggagtccctgagatatcgaaacgacaa
gaatggtttatgtag
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