KEGG   Mya arenaria (softshell): 128234596
Entry
128234596         CDS       T09995                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
maea  Mya arenaria (softshell)
Pathway
maea03020  RNA polymerase
maea03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    128234596
  09124 Replication and repair
   03420 Nucleotide excision repair
    128234596
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:maea03021]
    128234596
   03019 Messenger RNA biogenesis [BR:maea03019]
    128234596
   03400 DNA repair and recombination proteins [BR:maea03400]
    128234596
Transcription machinery [BR:maea03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     128234596
Messenger RNA biogenesis [BR:maea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     128234596
DNA repair and recombination proteins [BR:maea03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      128234596
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 128234596
NCBI-ProteinID: XP_052804862
LinkDB
Position
5:complement(27522464..27523571)
AA seq 172 aa
MFYHVSLEHEILLHPRYFGPNLLNIVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGIIQ
PSRGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKVGLFTEIGPLSCFISRHSIPADMEFD
PNSNPPCYKTKDEDVVIQQDDEIRIKIVGTRVDAKDIFAIGTLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttaccacgtttctcttgaacatgaaattctactccatccccgttattttggacca
aacttgctcaacattgtgaaacaaaaactgttcactgaagttgagggcacatgcactgga
aagtatggttttgtcattgcagtgacaacaattgacaatattggggctggaattatccag
cctagtagagggtttgtagtgtacccggtaaagtataaggcaattgtgtttcggcctttc
aagggagaagttttggacgcagtagtaactcaagtcaacaaagtgggcctgtttactgag
attgggccgctgtcgtgcttcatttctcggcattccatcccagctgatatggaatttgat
ccaaattccaaccctccttgttacaaaactaaagatgaagatgttgtgattcaacaagat
gacgaaattcgtatcaaaattgttggaacaagagttgatgccaaagacatttttgccatt
ggaactcttatggacgattatcttggacttgtcagctga

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