Mya arenaria (softshell): 128234607
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Entry
128234607 CDS
T09995
Name
(RefSeq) roundabout homolog 2-like isoform X1
KO
K06755
roundabout, axon guidance receptor 3
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
maea04515
]
128234607
Cell adhesion molecules [BR:
maea04515
]
Immunoglobulin superfamily
ROBO family
128234607
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
Ig_2
ig
fn3
V-set
C2-set_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
Ig_6
Ig_J_second
Motif
Other DBs
NCBI-GeneID:
128234607
NCBI-ProteinID:
XP_052804896
LinkDB
All DBs
Position
5:6167539..6292383
Genome browser
AA seq
1602 aa
AA seq
DB search
MWPADLLALACFRVVSLVLLASSIGYGSSEPQPASQLPGHLALVSMPNPRITEQPMDSYF
AKNLPATLDCKAEGEPTPTISWYQNDRKIVFDSITNYNDNTRMIVDQGRLFMLQFLHTKN
RTYTGTYYCVATNSHGTAQSRTAFIDIAVIRDDFREEPVDKTVPLDSRTVLGCRPPRGEP
EPIIDWLHDGKPVTKGDRISILGNGDLVFSNVNVDDGGEYICVASNIAGKKKSSPVTLTV
LEVPEITRYPEPLTVDEGDTVEFHCAASGGGDVRVGWRREGGASRKNWRVLADHTLQISR
VEVEDMGTYVCTAENGAGAVEAVAHLKVEYTPKILIRPSDQTAAVGRTISLPCSAIGNPK
PTIYWETTAKTVTELMFEKNLYADGRMSVSLDGTLRMVEVARGDAGRYTCKAISSKGKAE
AEATLTVQAGSDVIFPENDLRPPPIIRFGPQNQTLPRDGVAFLRCQATGTPQPTIHWLRN
DLPLPTDARYMVLDSGTLQISSLVMGDTGRFSCVATSETGETTVDAFIQVAISGMVDEQV
LKSPPDLTQLPPAPEKPVVSDVTNTSVRLSWLLVRITDNTPIMGYVVEYFEYGSSQSWQS
ADRLYVQKDVIITGLKPDTTYVFLVRAVNSYGTGGPSPLSDKIRTLEPNMGQPLVPEVNL
PSSEIENRLRNVNVNLFWGKAINSSSIRLSWTVDNEYGVVTGFIIEFKEILNMGSGQPPE
YGQAGGQRASYRPLSHTLTGLESYQYYEICVKATSGERTSPCSPPWLIQTGESVPSSPPG
NVVVEREGDSVIIVTWAPPDRAHRHGKITGYKIKCMSVDEQQNCSRQVNGTTNRVRIDGL
TAGVQYNIELAAETLEGVGSWSTVYAIGSGDSSVTKERWFIGSIGALGGVVWLGLCIFTC
WLCRSRKRRKKLKEQWYSNGGQASNEKQRDRNGSVVRKGYGKKDDNNDSGFPAEFNQLLQ
QCQAGGSGEGEDPGDMYPPGRDGGAPEMKTFYQTSGPVTPYATTALLQAQAQSARKQGGD
GIFRPGVCVQHSGGSADSHHTDRSITTDVSIELREGNKSSAGDSGHQSDENGMLIKQGRK
GPGYRPGIGPGPGVVNWNEMLPPPPVHPPSDTEYNPDDALYSEIPEDRSRSPHLPAQNSS
CSCPVSAHPQPVSAGPYPGSYSENCNRCQSLRNFDSRPYSPQQLIQLHRQHSQGCQPHHA
RAQTGSQRGPGGTPMYMHGYAQPWDSQPLPRGPYDYELAKVPQEGGYNYTQPIQDGLIKH
SNTLNSRGGQGWRPHPGDGQLPYMGAPVCDSANIPGGPPGNYCEGPCRGQGDTLNSINSG
YHRNLSDNGQLPYLEGYMIESPPSSGTGSDYRVCNSGGSQAGSGGDSGRSRSTGIQGQPA
QYPHRMFQSGPVDEGFARNTDSPISEDPEACDTETESQRDSLVAHWESVGEGSDVHSSSE
AEGSGEDGEGGNILTEEDFASAVARAAQLSGLTVVGSTVTDPNHNQKQVKKTRRQRQQAR
PPSPGYSTDSNYGTADIPHKPFPRSHRRKQLVETNKLRRKDDNSATPDSNMPSNDFDAAS
VPHPAPSSPDPLPSLYRPRPTETTPTNKPSPMFQFSDDIPVV
NT seq
4809 nt
NT seq
+upstream
nt +downstream
nt
atgtggcctgcggacttacttgccctggcttgtttcagagttgtctcccttgtcctcctg
gcttcatccattggatatggaagctcggaaccacaacctgcatcacagttgcccgggcac
ctggcccttgtgagcatgccaaacccacggatcaccgagcagcccatggactcgtatttt
gccaagaacctacccgcaacacttgactgcaaggctgaaggagagccaacaccaacaata
tcgtggtaccaaaatgaccgaaagatcgtgtttgacagcattaccaactacaacgacaac
actcgcatgatcgttgaccagggacgactctttatgcttcagtttctgcacacgaagaat
cgcacatacacaggaacatactactgtgtggctaccaactcacacgggacagcgcagagt
aggaccgccttcattgacatcgcagtaattcgggacgactttcgtgaagagccggtggac
aagactgttcctcttgattcccgtaccgttcttgggtgcagaccaccacgcggggaaccg
gaacccatcattgactggctacatgatggtaaaccagtcactaagggtgatcgcatcagt
atcctgggcaatggtgacctggtgttcagcaatgttaacgtggatgatggaggggagtac
atatgtgtggcatccaacattgctggcaagaagaaaagttcacctgtcacacttacagtg
ctggaggtgccagagattacgcgctaccccgagccattgaccgtggatgagggtgatact
gtggaattccactgcgctgcgagtggcggaggtgatgttagggtggggtggcgacgagag
ggtggggctagcaggaagaactggagggtactagcagatcacacattgcagatctcgcga
gttgaggtcgaagatatgggcacctatgtgtgtacggcagagaatggcgctggggccgta
gaggctgttgctcatctcaaagttgaatacacgccgaagatcttgatccgtccctctgac
caaactgccgctgttggacggacaatcagccttccatgctccgccattggcaatcctaaa
cccaccatttactgggaaactacggcaaaaactgtcacggaactaatgtttgagaagaac
ctgtacgcagatggccgtatgtcggtatccctggatgggaccttacgtatggtggaggtt
gcccgtggtgacgcaggaaggtacacgtgcaaggcaatctccagtaagggcaaggccgag
gctgaagctacactcactgtccaagcgggcagtgacgttatttttccagagaatgatctt
cgacctccgccaatcatacgttttggaccccagaaccagaccctgcctcgtgacggggtt
gctttcttgcgttgccaagcaacagggactccccaaccaacaattcattggctgagaaat
gatctgccgttgccgactgatgctcgatacatggtattggactcaggaactctacagatt
tcaagcctggtgatgggggacacgggtcggttcagctgtgtggcaaccagtgagacaggg
gaaacaactgtggatgccttcattcaggtggcaatttcaggaatggtcgacgagcaagtg
ttaaaatctccgcccgacctcacccagcttcccccagcccctgagaaacccgtcgtgagt
gacgtcacgaacactagtgtccgtttgtcctggctactcgttcgcatcactgataatact
cccattatgggctacgttgtggaatattttgaatatggatcctcacagtcatggcagtct
gctgacagactgtacgtacagaaggacgtgatcatcacgggcctgaaacctgacaccaca
tacgtgttcctggtgcgtgcagtcaacagttacggcacaggaggacctagcccactatct
gacaagattaggacacttgagccgaatatgggtcaacctcttgtgcccgaggtgaattta
ccatcgtctgaaatagagaaccgactccggaacgttaatgtgaatttgttttggggaaag
gccatcaactcgtcttctatcaggctttcttggacggttgacaatgagtatggcgtggtt
actggttttataatagagttcaaggaaatcctcaacatgggctcaggccagcctcctgag
tacggacaggcgggtggtcagcgggcttcttatcgtccactgagtcacacacttaccgga
ttggaaagctaccagtattatgagatctgtgtgaaggccactagcggagagcggacctcg
ccatgtagtccaccatggttgatacagaccggggaatcagtgcccagcagcccgcctggc
aatgttgtagttgaacgagagggagattcggtcatcattgtcacatgggctcccccagat
agagcccacagacatggcaaaataactgggtataagataaagtgtatgagtgtggacgaa
cagcagaactgcagtcgacaagtgaacggcacgacaaaccgtgtccgtattgacgggctg
acagctggtgtgcagtacaatattgagctggctgcagagactttagagggcgtgggaagt
tggagcactgtgtatgccataggttccggtgactccagtgtaacaaaagagcgctggttt
attgggagtatcggagcgcttggaggtgtcgtctggctcggactatgtatcttcacatgc
tggctgtgtcgctctcgtaaacgtcgtaagaagctcaaggaacagtggtactctaatggg
gggcaggctagtaacgaaaaacaacgtgacaggaatggcagcgttgtccggaaaggatac
ggcaagaaggacgacaataatgactcgggatttccggcagagtttaaccagctgttacag
cagtgtcaagcgggtgggtccggtgagggagaagaccctggggacatgtaccccccgggg
cgggatggaggtgccccagagatgaagactttctaccagacatcgggaccagtgaccccc
tatgctactacagctttgctacaggcgcaggcacagtcagccagaaaacagggaggtgat
ggcattttccgtccaggggtttgtgtccaacacagcggagggtccgcagattcccaccac
actgaccgttccattaccacagatgtgtctatagagttgcgggagggaaacaaaagttcc
gctggtgacagcggccaccaatcagatgaaaatggaatgcttataaagcagggtcgtaag
ggtcccgggtaccgcccagggattggccctggcccgggggtggtcaactggaatgaaatg
cttcccccaccccctgtccatccaccaagtgacacagagtataacccagatgatgccctg
tattctgagattcctgaggatcgatcccggagcccgcacttgcctgctcagaattcgtca
tgttcctgcccagtgtcagcacacccgcaaccggtgtctgcaggtccctatcctggctcg
tactcagaaaactgcaataggtgtcagtcactgcgaaactttgacagccgaccctactcc
ccccagcaattgatccagttgcaccgtcagcacagtcaggggtgccagcctcatcatgcc
cgggcacaaacaggctcccagagaggcccaggaggtacgcccatgtacatgcatggttat
gcccaaccctgggacagccagcccctcccacggggcccatatgactatgagcttgccaaa
gtgccccaagagggaggctataactacacacaacctatacaggatgggttgataaaacat
tctaacactctgaactccagagggggtcagggttggcggccccaccctggggacggacaa
ttaccctacatgggggctcctgtttgtgacagtgctaacattcctggtgggccccctgga
aactactgtgaggggccctgtagagggcagggtgatactctaaactctataaatagtggt
taccatagaaacctaagtgacaatggccagcttccatatttggaaggctacatgatagaa
tctccgccgagtagtgggacggggtcagactatcgtgtgtgtaacagtggtggtagtcaa
gcgggaagtgggggcgactcgggaaggtcaaggtcaactggtatccaggggcaaccagcg
cagtatccacaccgcatgttccagtctggcccagtagatgagggttttgcccggaacact
gactctccaatttccgaggacccagaggcctgtgatacagagacggaaagccagagagat
tctttggttgcccactgggagagtgtcggggaggggagtgatgtacattccagctcggaa
gcagaggggtcgggtgaggatggggaaggggggaacattctcaccgaggaggatttcgcg
agcgccgtcgcccgtgcagcccagctttctggtcttactgtcgttggctcaaccgtcact
gacccaaatcataaccagaaacaagtaaaaaagacccgtcgtcaaaggcaacaagcacgt
ccacctagccccggttacagcacagatagcaactacggtactgctgatatccctcacaaa
cctttcccgaggtcccatcgccgaaaacagctcgtcgaaacaaataaacttaggaggaag
gacgataactctgcaactcctgattctaacatgccttctaatgactttgatgcggcaagt
gttccccaccccgccccctctagtcccgaccccctgccctccctgtaccggccacgtcct
actgagaccacgcccaccaacaaaccatcacctatgttccagttctcggatgatatccca
gtggtatga
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