KEGG   Mya arenaria (softshell): 128234694
Entry
128234694         CDS       T09995                                 
Name
(RefSeq) coatomer subunit alpha-like isoform X1
  KO
K05236  coatomer subunit alpha
Organism
maea  Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:maea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:maea04131]
    128234694
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:maea04147]
    128234694
Membrane trafficking [BR:maea04131]
 Endoplasmic reticulum (ER) - Golgi transport
  Retrieval pathways
   Coat protein complex I (COP-I)
    128234694
Exosome [BR:maea04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   128234694
  Exosomal proteins of bladder cancer cells
   128234694
SSDB
Motif
Pfam: COPI_C B-prop_COPA_B_2nd Beta-prop_WDR5 Beta-prop_WDR3_1st WD40 WD40_Prp19 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_EML_2 Beta-prop_WDR3_2nd WD40_CDC20-Fz TPR_COPA_B Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_1st WD40_Gbeta EIF3I Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_EIPR1 WD40_MABP1-WDR62_2nd WD40_RFWD3 ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_SCAP NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_WDR19_1st Beta-prop_Aladin Beta-prop_DCAF4 LisH
Other DBs
NCBI-GeneID: 128234694
NCBI-ProteinID: XP_052805068
LinkDB
Position
5:30511701..30541182
AA seq 1228 aa
MLTKFETKSARVKGLSFHPKRPWVLTSLFNGVIQLWDYRMCTLIDKFDEHDGPVRGICFH
SQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHQDYIRTTTFHHEYPWILSASDDQTIRIW
NWQSRNCICVLAGHSHFVMCAQFHLSEDLIVSASLDQTVRVWDISGLRKKNVSPEQQQQR
SNSLEDRLRNSGQPDLFGMSDAVVKHVLEGHDRGVNWCAFHPSLPLIVSGADDRQVKLWR
MNESKAWEVDTCRGHYNNVSCCLFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRREHDR
FWVMNAHPTLNVFAAGHDSGMIIFKLERERPAYAVQGNILYYVKEKLLRKLDFTTNKDVP
CMQLRGGSRSPVFCMSYNPAENAVLMVIRASNVENSTYDLYSIPKDSDAKNPDAPDSKRS
SGLSAVWVARNRFAVLDRTHSIVIKNLKNEITKKVQTPNCEDIFYAGTGCLLLKDSDSVT
LFDVQQKRSLASVKMSKVKFVIWSADMSHVALISKHVITICNRKLESLCTIHENIKVKSG
AWEESGVFVYTTSNHIKYALTNGDHGIIRTLDLPIYITRIKGNSVFCLDREGRPRVMAID
PTEFKFKLALVNRKYDEVLHMVRHAKLVGQSIISYLQKKGYPEVALHFVKDEKTRFGLAL
ECGNLEIALEAARALDDPACWEKLGEAALLQGNHQIVEMAYQRTKNFDKLSFLYLITGNL
EKLRKMTKIAEIRKDTSGHFQNALFLGDVQERVKILSNCGQKSLAYLTAATNGLEEEAST
LKESFGEEERVPDLYPGATLLNPPPPITQQEANWPLLTMSKGFFEGAMAARGGQQNKMAA
ADDIEIEGAGEGWGDDDIKLDDDDEFGGEEAGVGGEDGTEGGGWDVDDEDLELPADLDLP
ATPTGGGEGFFVPPTKGTSQAQVWCNNSQLPVDHVLAGSFETAMRLLHDQVGVVNFEEYK
QLFLQTFSRSRTCYQGMPSLPPLFGYPHRNWKEAGGRSGVPAVGLKLNTLVQQLQVAYNL
TTAGKFGDAADKFRYILLSVPLLVVDTKQEIAEAQQLVEICREYIVGLSMEMSRKELPKA
SLQEQKRLCEMAAYFTHCKLQPVHLILTLRTAMTLFFKLKNCKTAASFARRLLELGPKPE
IATTARKILAACEKNPTDEHEIKYDQHNPFDICAASYTPIYKGKPVVKCPLSGACYLPEF
KGETCRVTKVTEIGKDCIGLRISQIQFR
NT seq 3687 nt   +upstreamnt  +downstreamnt
atgctgacaaagtttgaaactaagtcagcccgagttaaagggttgtctttccacccaaag
cgaccatgggtgttaaccagcttgttcaacggtgtcattcagctctgggactatcgcatg
tgtacactaatcgacaagtttgatgaacatgatggaccagtcagagggatttgcttccat
tctcagcagccgttgtttgtatctggaggtgatgactacaagattaaggtgtggaactac
aaacagcggcgatgtctgttcaccctgctagggcatcaagattacatccgaacaaccact
tttcatcatgagtatccatggatcttgagtgcctctgatgaccagaccattcgaatctgg
aactggcagtcgcgtaattgcatctgtgtgttagccggccacagccactttgtaatgtgt
gctcagtttcacctgtccgaggatctgattgtttccgcctccctcgatcagacggtacga
gtttgggacatctcgggacttcgcaagaaaaatgtctccccagaacaacagcaacagaga
tcaaattctctggaggaccgtcttcgtaactctggccagcccgatctgtttggcatgtcg
gatgcagtggtaaaacacgtccttgaaggccatgataggggagttaattggtgcgctttc
cacccatcgctgcccttgattgtgtcgggagcagatgatagacaggtcaagctgtggaga
atgaatgaatcaaaggcttgggaggttgatacatgccgaggccattataacaacgtttcc
tgttgtctgttccatccaagacaggagctgatactgagtaactctgaggacaagagtatc
agagtctgggacatgagcaagaggactggagttcagacattcagacgtgaacatgaccgt
ttctgggtgatgaatgcccacccgactctgaatgtgtttgcagcagggcatgacagtggc
atgattatattcaagctggaacgagaacgccctgcctacgcagtgcaaggaaacattctg
tattatgtgaaggagaaactgctgcggaagttggatttcacgacaaacaaggacgttcct
tgcatgcagctccgaggtggctccaggtcgcctgtgttctgcatgtcatacaacccagcc
gagaatgctgtcctcatggttattagagccagcaatgttgagaacagtacctatgacctg
tactccatccccaaggacagtgatgccaagaaccctgatgccccagacagtaaaaggtcc
tcgggcttatcagctgtttgggttgccaggaacaggtttgccgtgctggacagaactcac
tcgattgtaatcaagaatttgaagaatgagataaccaagaaggttcagacgccaaactgc
gaggacatcttctatgccggcactgggtgtcttctactgaaggacagtgacagtgttaca
ctgtttgatgttcaacagaaaaggtcgcttgcctctgtgaagatgtcgaaggtgaagttc
gtcatctggtcagctgatatgtcacatgtagccctcatcagtaaacatgtgatcacaatc
tgcaaccgtaagctggaaagcctgtgcaccatacacgagaacatcaaggtgaagagcggc
gcatgggaggaaagcggggtgtttgtatacaccaccagcaaccacatcaaatacgccctc
actaatggtgaccatggtattatccgtaccctggacctgcccatctacatcacccgtatc
aagggcaacagtgtgttctgtttggaccgagaaggacgacccagggtgatggccattgac
ccaacagaattcaagttcaaactggccctggtcaacaggaaatatgatgaggttctacac
atggtgcgacatgccaagctggtgggccagtccatcatctcctatctacagaagaagggc
taccctgaggtggctctgcactttgtcaaggatgagaaaacaagatttggtcttgctctg
gagtgtggaaatcttgagattgccctggaagcagctagggccctggatgacccagcatgt
tgggagaagctaggagaagcagccctgctccagggaaaccatcagatagtggaaatggcg
taccagaggaccaagaactttgacaagctgtccttcctctacctgatcactggaaatctg
gagaagctgaggaagatgacaaagattgctgagatccgtaaggatacaagtggacatttc
cagaatgctctcttcttgggtgatgttcaggagcgagtgaaaatcctatccaactgtgga
caaaaatcactagcctacctgactgcggccactaatggactagaggaggaggcatccact
ttgaaagagtcgtttggagaggaggaaagggtgcctgacctgtatcctggtgccaccctg
ctgaatcccccaccccctataacacagcaagaagccaactggccactgcttacaatgtcc
aagggattctttgaaggagcaatggctgcacgtggaggccaacaaaacaagatggctgcc
gcagacgatatcgagattgagggagctggagagggctggggagacgatgatatcaaattg
gatgatgatgacgagtttggtggagaggaagcaggcgttggtggggaggatggtacggag
ggagggggctgggatgtcgatgatgaagatcttgaactgcccgccgaccttgaccttcca
gccacgcccactggcggaggggagggattctttgtaccgcccactaaaggcaccagtcaa
gcacaggtgtggtgtaacaattcccaattaccagtggaccatgtgctggctggatcattc
gagacggctatgaggctgctacatgaccaagttggtgttgtcaactttgaagaatacaag
caactgttcctgcagacatttagccgtagtaggacttgctatcagggtatgccctcacta
ccgccactgttcggctacccccacagaaactggaaagaggcaggtggtcgcagtggtgtg
ccagcagtcggcctaaagttaaacaccttagtccaacagttacaagtagcatataacctc
acaacagcgggaaagtttggcgatgctgcggacaagttcagatacatccttctcagtgtt
cccttgcttgtggtagatacaaaacaggagattgccgaggcgcagcagctagttgagata
tgccgcgagtacattgtgggtctgtctatggaaatgagcagaaaagagctgcccaaggcc
tcactgcaggaacaaaaaaggctatgtgagatggcagcatatttcacccactgcaagttg
cagccagttcacttgattctcacgttgcgtacggccatgactctgttcttcaagcttaag
aattgcaagacggctgcatcattcgctaggcggttactggaattgggacctaaaccagaa
attgccactacagccaggaagattctagctgcatgtgagaagaacccaacggatgagcat
gaaataaaatatgaccagcataatccctttgacatctgtgcagcttcatatacacctata
tacaagggcaagccagtcgtcaagtgtcctctcagcggagcctgttacctgccggagttc
aagggcgagacctgcagagttaccaaggtgacagaaatcggaaaggattgtattggattg
agaataagccagattcagttccgataa

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