Mya arenaria (softshell): 128234750
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Entry
128234750 CDS
T09995
Name
(RefSeq) CLIP-associating protein 1-like isoform X1
KO
K16578
CLIP-associating protein 1/2
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128234750
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
maea04812
]
128234750
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
128234750
Cytoskeleton proteins [BR:
maea04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
128234750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLASP_N
XMAP215_CLASP_TOG
CEP104-like_TOG
HEAT
HEAT_EF3_N
TOR1L1_N
HEAT_EZ
Cnd1
RTP1_C1
HEAT_2
HEAT_DAAF5
Adaptin_N
HEAT_Maestro
TAN
Dopey_N
UTP20
PDS5
IFRD
SCD
Htt_N-HEAT
MMS19_C
Motif
Other DBs
NCBI-GeneID:
128234750
NCBI-ProteinID:
XP_052805179
LinkDB
All DBs
Position
5:38865414..38991500
Genome browser
AA seq
1483 aa
AA seq
DB search
MATLTDFLPNVTTQDTRKRQQCYESLSRYLSDPRSSLECEDNDAFVSGLASWVTCSNYKV
SLNGLEILCLMIDRMGEDFRPYVTSVLPACVDRLGDSKEQVRDQAQQLLLKLMMPASTPQ
YVFERILSNFTHKLWHVREGVLICLQNTINRYGARCLQLSKIVSSICKLLEDQTPQVREA
AINTLAEIYRHVGEKVRADLAKKGIAPQRLQQVFAKFDDVKLSGNMLATADLGPGRSERV
EDEMDFARPNTTKVLKSKRVPSSASSTCSTGSLGRKSGLTLSKSASATASRLSFRRKSAD
APGSSTGAVDEDFFVRSFEDVNRVQLFSSRDLTDHLTKCKDTLSDTNIAWEKRVEALKTL
RGIMVAGAMDYDDFNPFLRTLEPCFMNSVKDLRSQVVREACITVGYFSQQLGSRFDHSAE
TLLPVLINLIPNSAKVMATSGLTCIRFILQYTFASRLIPIITNNLSSKASIIRRYCFEFM
NQVLHTWPTHILEKHIAILQEAIKKGISDADSEARSFARKSFWGFTTHFKDQGDLLLSHL
DPAKQKALQGELSNSSSSNSVNSGQGGASAGASRVPRARSASQDRGHETSTLGRIGKKSH
QRFRSARSDTGGDLDNDDLDGQGEDLETFNDRPVGGTSNGITRSSSAVDITSGTSTTPRR
RSSSTLLAARLSNGSTNSLPRQKPRYDHIVSSYAQYRASPSIDHSGRNRTRLGTSQSQPN
SRSSSPTPRGSYLTHTVGLGAPMTPGRPRKASTLSNPRSTGTSRETSPSRSSVKSSGYGR
ERRSSGSKAGAGTKTIRTLKPGQDVEELLEVALRQPIRKRYESYDSDDNASETSSVCSER
SFSSSYGKTSEDMGEILTLLQSNAYQERKEGVVSLHKLLRQNRFLTRIELKKATEIFTRM
FHDPHSKVFSLFLEMLIDLIQVHSRDITDWLYVLLSRLLHKLGADILGSLQAKVQRALDA
TRENFPSDLQFNILTRFIVDQTQSQSMKANGLGKPAVKLAMLNYLSQLVPCMEPADFSNN
SDSRLVVSRIITWTNEPKNTDVRKAAQAVLISLFSLNPPEFSMMLSGLPKTFQDGATRIL
QQHLKGVHEPDVLTPRNTASPQAGQNRSRPPSRGPYGRDEADTENMNPEDIYNSFKKTAA
EIQNLSFNSKLDNFDDVKKRKEFTSQDSGIQDLRNDSPDAGDSRSVKQAYNPSQYQDEGT
INGYNRSNQAEAFLADNDVSFNEVSFPVPLPEKRKKKPKGALDQEDVISHILSELSNHNH
RHEERKNAMLSLIKLTREGMFELWEDHFKSILLILLETLGDDDMQTRSLALRVLREILRN
QSERFKEYAELTVLRILDAHKDPEKEVVRAAEECAATLASYIPPAQITRILIPIIQTAPM
PINLAAIKMQTRVMEQLSQDQLLPLLPDALPGLLKGYDDSESSVRKASVFCLVAMYMVVG
EGLRPFLSELNGSKIKLLNLYIKRAQAQRESGKVTSPYLSDTS
NT seq
4452 nt
NT seq
+upstream
nt +downstream
nt
atggcaacattaactgatttcctgccaaatgtgaccactcaagacacgaggaaacggcag
cagtgttatgagtctctgtcccgatacctgagtgacccgagaagttcactggagtgtgag
gacaatgatgcgtttgtgagcgggctggcatcttgggttacatgtagcaactataaggta
tccctgaatggacttgagatactgtgcctgatgatagatcgcatgggggaggactttcga
ccatatgtcacatcagtccttcctgcgtgtgtggaccgccttggcgactcaaaagagcag
gtgagagaccaggcccagcaactgctgctcaagctcatgatgccagcgtctactccacag
tatgtttttgagcgaatcctgagtaatttcacacacaagctgtggcatgtgagagaggga
gtgctcatttgtctgcagaacaccatcaacaggtatggggcacgatgtctccagctgtca
aagattgtatcgtctatctgcaaacttctagaggatcagactccccaggttcgagaagca
gctataaacacattggccgagatttatcgacatgttggtgaaaaagtgcgagcagacctt
gcaaagaaaggaattgcacctcagaggttacagcaggtctttgccaagtttgatgatgtg
aagctatctggaaatatgctggctaccgctgacctcggtcctggtaggagtgagcgcgtt
gaggacgagatggactttgcccggcccaataccaccaaagtgctcaagtcaaagcgggtt
cctagttcagcaagctccacatgctccacaggttcactcggacgcaagagtgggctcaca
ctctccaagagtgcatcagctacagcatcaagattgtcgttccggaggaagtcagcagat
gcaccaggttcaagtacaggggcagtggatgaggacttctttgtgcgctcgtttgaggac
gtgaacagagtacagctattctcgtctcgcgacctcacagatcacctgaccaagtgcaaa
gacacattgtctgacacgaacatagcctgggagaaacgtgtggaggctttgaagacattg
cgagggattatggtagctggtgcaatggattatgatgactttaacccattcctgcgaaca
ttggagccttgtttcatgaactcagtgaaggacctccggtctcaagttgtacgagaagcc
tgtattactgtagggtatttttcccagcagctaggcagcaggtttgaccacagtgcagag
accttgctgccagtgctcatcaatctcattccaaacagtgccaaagttatggccacctcc
ggccttacatgcatcaggttcatccttcaatacacatttgcttctcgcctcatcccaatc
atcaccaacaacctgtcctcaaaggccagtataatccgcaggtactgctttgagtttatg
aaccaggtgttacacacatggcccacccatatactagagaaacacatagccattctacag
gaggccattaagaagggcataagtgatgcagactcagaggccaggtcattcgccaggaag
tcattctggggttttacaacacactttaaagaccagggtgacttgctgttgtcccacttg
gaccctgcaaaacagaaggccctgcagggggaactgagtaactcctccagtagtaactct
gttaatagtgggcaaggtggggcttctgcgggggcctccagagtgccccgagcacgctca
gccagccaggaccggggacatgagaccagcactctcgggcgtattggtaaaaagagtcat
cagcggttccggtcagcacgtagtgacactggcggagacctagataatgatgatcttgat
ggtcaaggtgaagatttagaaacatttaatgaccggccagtggggggcacatctaacggt
attacacgctcaagtagcgctgttgatataacgagcggcacctcaactacgccgcgtaga
cggtcatcatctacacttctcgctgcacgtttgtcaaacggatccacaaattctctacca
cggcagaaaccgcgatatgatcatatcgtatcttcctatgctcagtacagagcctctcct
tcgattgaccactccggtcgcaatagaacgcgactcgggacctcccagtcccaacctaac
agtcgatcaagttcaccaacgccccgtggcagctacctgacccacactgttgggttgggc
gctcctatgacccctggccgaccccgtaaggcctccaccctctccaacccccgcagtacg
ggcaccagcagggaaactagcccctcacgatcttcagtgaagtcctccggatacggtcga
gaacggaggtctagcgggagtaaggcaggtgcaggaacgaagacaatacggacactgaaa
cctggacaggatgttgaggaactactcgaagttgctctgcggcagcctatccggaaacgt
tacgagagttatgattcagatgataatgccagtgaaacatcaagtgtttgctcagaaagg
tcctttagctcttcctatggcaaaacctctgaggacatgggtgagattctcacattgttg
cagagcaatgcctaccaggagcggaaggagggtgttgttagtcttcataaactattacga
caaaataggttcttaacgcgaatagaattaaaaaaggcaacagaaatattcactcggatg
ttccatgatccacatagtaaagtgttcagtttgtttttggagatgttgatagacttgata
caagtgcacagtcgtgacataacagattggttatatgtgctgttgtcacgtctcttacac
aagctgggggcagacattctcggctcactacaggcaaaagtgcagcgagccctcgatgct
accagggagaactttccaagtgacctgcaatttaatatcctgacgcggtttattgtggat
caaacccagtctcagagcatgaaggccaatggattgggaaaaccagctgtgaagctggcc
atgttgaattacctgtctcagctggtgccgtgtatggagccagcagatttctccaacaac
agcgactctcgcctggttgtctcccgcatcattacttggaccaacgaaccaaagaacaca
gatgtccgcaaggcggcccaggctgtgttgatatccctgttcagtctcaacccacctgag
ttctccatgatgttgtctggactgccgaaaaccttccaggatggagccacccggatattg
cagcagcacctgaagggtgtccatgagccagacgtgctgaccccgcgcaacacggccagc
ccacaggctggccagaacaggtcaagaccaccatcaaggggtccatatgggcgtgatgag
gcagatacagagaatatgaacccagaagatatttataactcctttaagaaaactgccgca
gaaatacagaatctgagttttaacagtaaattggacaattttgatgatgttaaaaaacga
aaagagtttacatcacaagacagcggaattcaggatctgaggaatgacagccccgatgcg
ggtgactctaggtcagtgaagcaagcgtacaatccttcacaataccaggatgagggaact
ataaatggatataaccgatcaaaccaggcagaggcttttcttgctgataacgatgtctca
tttaacgaagtcagttttcctgttccgttacctgaaaaacgaaagaaaaagccaaaaggt
gcactggatcaggaggacgtgatctctcacattctcagtgaactctccaaccataaccat
agacatgaggagcgaaagaatgcaatgttgtctctgatcaagctgacacgtgagggtatg
tttgagctgtgggaggaccacttcaagagcattcttctcattctgctagagacactcggg
gatgatgatatgcagacaaggtcccttgctctgcgtgtgttacgggagatcctgcggaac
cagtcagagcggttcaaggagtacgcagagctcaccgttcttcgaatcctggacgcccac
aaagaccctgagaaagaggttgtgcgagcagcggaggagtgtgcagccacactggccagc
tacatcccacctgcccagatcacccgcatactgatcccaattatccagacagccccaatg
ccaatcaatctggccgctataaagatgcagactcgggtcatggagcagctctctcaagac
cagcttctcccactcctaccggacgcccttcctggactcctcaagggctatgatgacagt
gagagcagtgtgcgaaaggcgagcgtcttttgtctggttgccatgtacatggtggttggg
gaaggcttgcgaccattcctttcagaacttaatggcagcaagataaagctgttgaatttg
tacatcaagagagcccaggcccagcgagaaagcggcaaggtgacatctccctacctctca
gacacatcctga
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integrated database retrieval system
