Mya arenaria (softshell): 128234778
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Entry
128234778 CDS
T09995
Name
(RefSeq) coatomer subunit alpha-like isoform X1
KO
K05236
coatomer subunit alpha
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128234778
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maea04147
]
128234778
Membrane trafficking [BR:
maea04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
128234778
Exosome [BR:
maea04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
128234778
Exosomal proteins of bladder cancer cells
128234778
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
WD40_CDC20-Fz
TPR_COPA_B
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EIPR1
WD40_RFWD3
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_DCAF4
LisH
Motif
Other DBs
NCBI-GeneID:
128234778
NCBI-ProteinID:
XP_052805253
LinkDB
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Position
5:complement(31329100..31359856)
Genome browser
AA seq
1228 aa
AA seq
DB search
MLTKFETKSARVKGLSFHPKRPWVLTSLFNGVIQLWDYRMCTLIDKFDEHDGPVRGICFH
SQQPLFVSGGDDYKIKVWNYKQRRCLFTLLGHQDYIRTTTFHHEYPWILSASDDQTIRIW
NWQSRNCICVLAGHSHFVMCAQFHLSEDLIVSASLDQTVRVWDISGLRKKNVSPEQQQQR
SNSLEDRLRNSGQPDLFGMSDAVVKHVLEGHDRGVNWCAFHPSLPLIVSGADDRQVKLWR
MNESKAWEVDTCRGHYNNVSCCLFHPRQELILSNSEDKSIRVWDMSKRTGVQTFRREHDR
FWVMNAHPTLNVFAAGHDSGMIIFKLERERPAYAVQGNILYYVKEKLLRKLDFTTNKDVP
CMQLRGGSRSPVFCMSYNPAENAVLMVIRASNVENSTYDLYSIPKDSDAKNPDAPDSKRS
SGLSAVWVARNRFAVLDRTHSIVIKNLKNEITKKVQTPNCEDIFYAGTGCLLLKDSDSVT
LFDVQQKRSLASVKMSKVKFVIWSADMSHVALISKHVITICNRKLESLCTIHENIKVKSG
AWEESGVFVYTTSNHIKYALTNGDHGIIRTLDLPIYITRIKGNSVFCLDREGRPRVMAID
PTEFKFKLALVNRKYDEVLHMVRHAKLVGQSIISYLQKKGYPEVALHFVKDEKTRFGLAL
ECGNLEIALEAARALDDPACWEKLGEAALLQGNHQIVEMAYQRTKNFDKLSFLYLITGNL
EKLRKMTKIAEIRKDTSGHFQNALFLGDVQERVKILSNCGQKSLAYLTAATNGLEEEAST
LKESFGEEERVPDLYPGATLLNPPPPITQQEANWPLLTMSKGFFEGAMAARGGQQNKMAA
ADDIEIEGAGEGWGDDDIKLDDDDEFGGEEAGVGGEDGTEGGGWDVDDEDLELPADLDLP
ATPTGGGEGFFVPPTKGTSQAQVWCNNSQLPVDHVLAGSFETAMRLLHDQVGVVNFEEYK
QLFLQTFSRSRTCYQGMPSLPPLFGYPHRNWKEAGGRSGVPAVGLKLNTLVQQLQVAYNL
TTAGKFGDAADKFRYILLSVPLLVVDTKQEIAEAQQLVEICREYIVGLSMEMSRKELPKA
SLQEQKRLCEMAAYFTHCKLQPVHLILTLRTAMTLFFKLKNCKTAASFARRLLELGPKPE
IATTARKILAACEKNPTDEHEIKYDQHNPFDICAASYTPIYKGKPVVKCPLSGACYLPEF
KGETCRVTKVTEIGKDCIGLRISQIQFR
NT seq
3687 nt
NT seq
+upstream
nt +downstream
nt
atgctgacaaagtttgaaactaagtcagcccgagttaaagggttgtctttccacccaaag
cgaccatgggtgttaaccagcttgttcaacggtgtcattcagctctgggactatcgcatg
tgtacactaatcgacaagtttgatgaacatgatggaccagtcagagggatttgcttccat
tctcagcagccgttgtttgtatctggaggtgatgactacaagattaaggtgtggaactac
aaacagcggcgatgtctgttcaccctgctagggcatcaagattacatccgaacaaccact
tttcatcatgagtatccatggatcttgagtgcctctgatgaccagaccattcgaatctgg
aactggcagtcgcgtaattgcatctgtgtgttagctggccacagccactttgtaatgtgt
gctcagtttcacctgtccgaggatctgattgtctccgcctccctcgatcagacggtacga
gtttgggacatctcgggacttcgcaagaaaaatgtctccccagaacaacaacagcagaga
tcgaattctttggaggaccgtcttcgtaactccggccagcccgatctgttcggcatgtcg
gatgcagtcgtaaaacacgtccttgaaggccatgataggggagttaattggtgcgctttc
cacccatcgctgcccttgattgtgtcgggggcagatgatagacaggtcaagctgtggaga
atgaatgaatccaaggcctgggaggtggacacctgtcgaggccattacaacaacgtttcc
tgttgtctgttccacccaagacaggagctgatcttgagtaactctgaggacaagagtatc
agagtctgggacatgagcaaaaggactggagttcagacattcagacgtgaacatgaccgt
ttctgggtgatgaatgcccacccgactctgaatgtgtttgctgcagggcatgacagcggc
atgatcatattcaagctggaacgagaacgccctgcttatgctgtgcaaggaaacatcctg
tattatgttaaggagaaactcctgcggaagttggatttcacgaccaacaaggacgtgcct
tgtatgcagctgagaggtggctccaggtcacctgtattttgcatgtcatacaacccagca
gagaatgctgtcctcatggttattagagccagcaatgttgagaacagtacctatgacctg
tattccatcccaaaggacagtgatgccaaaaaccctgatgccccagacagtaaaaggtcc
tcgggcttatcagctgtttgggttgccaggaacaggtttgctgtgctggacagaactcac
tcgattgtaatcaagaatttgaagaatgagataaccaagaaggttcagacgccaaactgc
gaggacatcttctacgccggcacagggtgtcttctactgaaggacagtgacagtgttaca
ctgtttgatgttcaacagaaaaggtcgcttgcctctgtgaagatgtcaaaggtgaagttc
gtcatctggtcagctgatatgtcacatgtagccctcatcagtaaacatgtgatcacaatc
tgcaaccgtaagctggaaagcctgtgcaccatacacgagaacatcaaggtgaagagcggc
gcgtgggaggaaagcggggtgtttgtatacaccaccagcaaccacatcaaatacgccctc
actaatggtgaccatggtattatccgtaccctggacctgcccatctacatcacccgtatc
aagggcaacagtgtgttctgtttggaccgagaaggacgacccagagtgatggccattgac
ccaacagaattcaagttcaaactggccctggtcaacaggaaatatgatgaggttctacac
atggtgcgacatgccaagctggtgggccagtccatcatctcctatctacagaagaagggc
taccctgaggtggctctgcactttgtcaaggatgagaaaacaagatttggtcttgctctg
gagtgtggaaatcttgagattgccctggaagcagctagggccctggatgacccagcatgt
tgggagaagctaggagaagcagccctgctccagggaaaccatcagatagtggaaatggcg
taccagaggaccaagaactttgacaagctgtccttcctctacctgatcactggaaatctg
gagaagctgaggaagatgacaaagattgctgagatccgtaaggatacaagcggacatttc
cagaatgctctattcttgggtgatgttcaggagcgagtgaaaatcctatccaactgtgga
caaaaatcactagcctacctgactgcggccactaatggactagaggaggaggcatccact
ttgaaagagtcgtttggagaggaggaaagggtgcctgacctgtatcccggtgctaccctg
ctgaatcccccaccccctataacacagcaagaagccaactggccattgcttacaatgtcc
aagggattctttgaaggagcaatggctgcacgtggaggccaacaaaacaagatggctgcc
gcagacgatatcgagattgagggagctggagagggctggggagacgatgatatcaaattg
gacgatgatgacgagtttggtggagaggaagcaggcgttggtggggaggatggtacggag
ggagggggctgggatgtcgatgatgaagatcttgaactgcccgccgaccttgaccttcca
gccacgcccactggcggaggggagggattctttgtaccgcccactaaaggcaccagtcaa
gcacaggtgtggtgtaacaattcccaattaccagtggaccatgtgctggctggatcattc
gagacggctatgaggctgctacatgaccaagttggtgttgtcaactttgaagaatacaag
caactgttcctgcagacatttagccgtagtaggacttgctatcagggtatgccctcacta
ccgccactgttcggctacccccacagaaactggaaagaggcaggtggtcgcagtggtgtg
ccagcagtcggcctgaagttaaacaccttagtccaacagttacaagtagcatataacctc
accactgcgggaaagtttggcgatgctgcggacaagttcagatacatccttctcagtgtt
cccttgcttgtggtagatacaaaacaggagattgcagaggcgcagcagctagttgagata
tgccgagaatacattgtgggtctgtctatggaaatgagcagaaaagagctgcccaaggcc
tcactgcaggaacaaaaaaggctatgtgagatggcagcatatttcacccactgcaagttg
cagccagttcacttgattctcacactgaggacagccatgacgctgttcttcaagcttaaa
aattgcaagacggctgcatcattcgctagacgattactggagctgggacctaaaccagaa
attgccactacagccaggaagattctagctgcatgtgagaagaacccaacggatgagcat
gaaataaaatatgaccagcataatccctttgacatctgtgcagcttcatatacacctata
tacaagggcaagccagtggtgaagtgtcctctcagcggagcctgttacctgccggagttc
aagggcgagacctgcagagttaccaaggtgacagaaatcggaaaggattgtattggattg
agaataagccagattcagttccgataa
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integrated database retrieval system
