KEGG   Mya arenaria (softshell): 128234787
Entry
128234787         CDS       T09995                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
maea  Mya arenaria (softshell)
Pathway
maea03030  DNA replication
maea03410  Base excision repair
maea03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    128234787
   03410 Base excision repair
    128234787
   03420 Nucleotide excision repair
    128234787
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:maea03032]
    128234787
   03400 DNA repair and recombination proteins [BR:maea03400]
    128234787
Enzymes [BR:maea01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     128234787
DNA replication proteins [BR:maea03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    128234787
DNA repair and recombination proteins [BR:maea03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      128234787
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf_DPOE_2 zf-DPOE DNA_pol_B DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 128234787
NCBI-ProteinID: XP_052805264
LinkDB
Position
5:complement(22158233..22205104)
AA seq 2266 aa
MVLQNSGRFKTDAGKGENNAGYSKEESAEKRVTKARQNDEIDVKFGFERYKDPQERCGWM
INMHPADIMDEDKRLVSAVDYYFVEDDGGRFKATLPYRPYFYVLCKKGTEREVAAYLTKK
FSGKIASVETVNKEDLELHNHLVGLKRQYVKLSFLSVEDLMKVKRDIQPAVRKNKANDKS
HEVYTSYMDDDDLVSKKTVDQMENIVDIREHDVPYHVRVSIDLSLNVGHWYSVRGRGSQA
PEIKRREDLVHRPDPVVLAFDIETTKLPLKFPDSTIDQIIMISYMIDGQGYLITNREIIS
QDIEDFEYTPRPEFPGPFIIFNESDEFTLLQRFFDHILEVKPHIFATYNGDLFDWPFVEA
RAAFHGLDMSREIGFEKDSQDEYKARPAIHMDCFRWVKRDSYLPVGSRGLKAVAKAKLRY
DPTELDPEEMCRMATEEPQVLSNYSVSDAVATFYLYQEYVHPFTFALCTIIPMEPDEVLR
KGSGTLCEALLMVQAYHANIVFPNKQESVLNKLTEDGHLMDSETYVGGHVEALESGVFRA
DIPCRFRMVPEAFQNLIDKVEGTMRFSIEVEEKIPMDQVTNFNEVCTDIIERLSMLRDCP
NRLENPIIYHLDVGAMYPNIILTNRLQPPAIVDEATCAACDFNKPGATCQRRMPWMWRGE
IMPATRSEYHRIQQQLENEKFPPSEPGRRPRAFHELPRLEQAEIEKKRLAEYCRKAYKKT
KHTRMEERTATICQRENSFYVDTVRAFRDRRYEFKGLTKVWKKKLSEAEDSKDASEIKKA
NGMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCLTGAHIITKAREIVEQIG
RPLELDTDGIWCVLPATFPENYVIKTNNPKKPKVTISYPGAMLNVMVKDFFTNDQYQELV
NTDTMEYKVRNENSIFFEVDGPYLSMILPASKEEGKKLKKRYAVFNFDGSLAELKGFEVK
RNGELELIKIFQSSVFEAFLKGKTLEECYSAVAKVADYWLDVLFSKAANMPDSELFELIS
EKRSMSRKLEDYGSQKSTSISTARRLAEFLGDQMVKDAGLSCKFVISKKPEGAPVTERAI
PMTIFEAEPGVKKHYLRKWLKAPGMNSFDIREILDWQYYIERLGGTVMKIITIPAALQNV
ANPVPRIAHPDWLQKKLLERNDVFKQKKISEIFAAAAKPTQDDLVFKKPAAIQDMEDIGS
RPAVGPRGVATSNKRKRTSDEFSQSQDDSQLDGSQSWRDALGPPPSAGNTMDEQLAWLAY
HKKKWAMQIRERKESRKRRRVAFDDGPSHMPLTSSSRGIGGFLRRTARSIMDMPWQIVQL
IESGHPGQFKLWALIGSDLHAMKLNVPRIFYVNQKTPKVGEGQLWRKVIKTLPRAHPIMN
LYEYSVPEDVYQEHINEISADLSSPEIEGVYETHVPLLFRALVRVGCVTMVNRDFSKQMA
GRETDTFELENLEFRTLAQFSYLEPGSIKNLYLYHHVCGSKMLYGLFFPMSKKGTIFVVD
TVRSDQMPNVNAMFNAERNVKVSQGKDEAMLPEAGHKFDYKLEKDVNQVFRTVQRMLSAY
KDEKRGPTYIAVQSSLDFQHLIADMPGLGDFPLVPIHISDSENLYNVLDWQRVGCRRMLQ
HYMNVDIILQAMMEQCRYLHMPVGNFPKDITMAGCDIFFARHLNRHNHVLWCSPTERPDL
GGKEADDNRLGIQVENLTTEINNAGAYSTVCVELDMNSLAVDTIIESSHVNDQEGASAMS
FDTMPQANIEELVQGQGAATMMTSYDETALCSTAFRILKSMVQSWVRDVTVHSNVFADNQ
IIHFYRWLRSPNALLYDPALRRTLHNMMKKVFMQLMGEFKRLGSNIVYANFNRVVLCTKK
RRLMDALAYVEYITNTIKGKELFHLIEMSYEQCWEYLLWLDPANYGGIKGKLPSEAEVEV
VAPETAERGEDSDEEERVGEDEGEELNKSDEEEAPEIEMNWNIMHFLPTAAACQTNFNMI
IAGYILSVYSNFQEEQRRLTPGNTPVRRRNTSQSQSYLPDTTTTPSSVSFTQNLISGDLA
QQMFALTQKIHTKLSGNRTKGELAEEFPRPPGSHLALHNPALEFVKAICKVLSLDANINL
QVSKLQRDLLKLIGIGEFAPEAVFLDPCLSYVLPEVICKACNHIRDLDLCRDPYLSQSGP
GAQWSCIQCKEEYDLEEIEQSLIDSVHRKSMAYVLQDLECAKCNQVKDTNMRTYCTCAGE
FKNIATLDDMGKQLRTFRGIASHYNMVLLQETVEWILKLNPQIIDH
NT seq 6801 nt   +upstreamnt  +downstreamnt
atggtgcttcaaaacagcggaagattcaaaaccgacgctggtaaaggagaaaacaatgct
ggttacagtaaagaagagtctgcagaaaagcgcgtaacgaaggccagacagaatgacgaa
attgacgtaaagtttgggtttgagaggtacaaggacccacaggagcgatgtggttggatg
atcaacatgcacccggctgatatcatggatgaagacaaacgcttggtcagtgcggttgat
tactactttgttgaagatgatggtgggagatttaaggcaaccttgccgtataggccttac
ttctatgtgctgtgtaagaagggaactgagcgggaagttgctgcctacctgaccaagaag
ttctctgggaagattgcatctgtcgaaactgttaacaaagaggatcttgagctgcataac
catttggttggtttaaaaaggcagtatgtcaaattgtcattcctctccgttgaagacttg
atgaaagttaagcgtgacatccagcctgctgtacgcaaaaacaaggccaatgacaagtca
catgaagtctacacaagttacatggatgatgatgatctcgtctcgaagaagacagttgac
caaatggagaacatagttgacatcagagagcatgatgtcccataccatgtgcgagtgtct
atagaccttagcctgaatgttggccactggtattctgtgaggggaaggggcagccaggca
ccagagatcaaacgaagggaggatctggttcatagacctgacccagtggtgctagcattt
gatattgagactacaaaacttcccctgaagtttcccgactccactattgaccagatcatt
atgatctcatacatgatcgatggacagggatacctgattactaatagggagataatatcc
caggacatagaagactttgaatatactccaagacccgagtttcccgggccgttcattata
tttaatgaatctgatgagtttacacttctacagaggttctttgaccacatactggaggtc
aagcctcacatatttgctacatacaacggtgaccttttcgactggccgtttgtggaggca
cgggcagccttccatggtctggacatgtctcgcgaaattggtttcgagaaagacagccag
gatgagtacaaagccagacccgccatacacatggactgcttcagatgggttaaaagagac
agctatttgccagttggtagtcggggtttgaaggctgttgcaaaggccaagctgagatat
gacccaactgaacttgatcctgaggagatgtgccgaatggcgacagaggaaccccaagtg
ttgtccaactactctgtgtctgatgcagtggccacattctacctgtaccaggaatatgtg
catccgttcaccttcgccctgtgcaccatcatccctatggagccggatgaggtacttaga
aagggatctggtaccctgtgtgaagccttgttgatggttcaggcttaccatgcaaacatc
gtgttccccaacaagcaagagtctgtgctgaacaagctgacagaggacggacacctcatg
gacagtgagacctatgttggtggacatgtagaggcattagagtcgggggtcttcagggca
gatatcccctgcaggttcagaatggtgcctgaagccttccagaatctgattgacaaagtg
gagggaacaatgaggttctctattgaagtagaggagaaaatacccatggatcaggtcaca
aactttaacgaggtatgcactgatatcatagagcggttatcaatgttgcgtgactgtcct
aatagactggagaacccaatcatctaccatctggatgtcggagccatgtaccccaacatc
attctcaccaacagacttcagccccctgccatagtagatgaggcaacttgtgctgcatgt
gacttcaacaagcctggagcaacgtgccaacggagaatgccttggatgtggaggggagaa
atcatgccggcaacaaggagcgaataccatcgtatacagcagcagttagagaatgaaaag
ttccctccctcggagcccggtcgacggccccgtgccttccatgaactccccaggctggag
caggctgagattgaaaagaaacgactggcagaatattgccgaaaggcatacaagaagacc
aagcatacaagaatggaggaacgaacagccaccatctgtcaacgtgagaactcgttctat
gtggatacagtgagggctttcagggacaggagatatgagttcaagggtcttaccaaggtc
tggaagaagaagctatcagaggccgaggattcgaaagatgcgtcagaaatcaagaaggct
aacggcatggtggtgctgtacgattccctgcagctggcacacaagtgtatcctcaactct
ttctatggctacgtcatgaggaagggggctcgctggtacagtatggagatggcaggaatc
gtgtgcttaacgggtgcccatatcatcaccaaggccagggaaattgtggaacagattggg
cgtcccctcgagctggacacagacggtatctggtgtgtgctgcctgcgacgttccctgag
aactacgtcattaaaaccaacaaccccaagaaacccaaggtcaccatctcctaccctggg
gctatgctgaatgtcatggtcaaggacttcttcacaaacgaccaataccaggagcttgtc
aacactgatacaatggagtacaaggtccgcaatgagaactccatcttctttgaggttgat
gggccgtatctctccatgattctccctgcatcaaaggaggagggcaagaagctgaagaaa
cgatatgcagtgttcaactttgatggctcccttgctgaactgaaggggtttgaagtaaaa
cgtaatggtgagcttgagctgatcaagatcttccagtcatcggtgtttgaggctttcctt
aaggggaagaccctggaggagtgttacagtgcagtggccaaggtggcagattactggctg
gatgtgctgttcagcaaggcagcgaatatgccggactctgagctatttgagttgatctcg
gagaagcgaagtatgtctcggaaactcgaggactatggatcccagaagtctacctccatc
tctacggctagaagactggcagaatttctgggagaccagatggttaaggatgcgggtctt
agctgcaagtttgtcatctccaagaagcccgagggagcacccgtcacggaaagggctatt
cccatgaccatatttgaggctgagcctggtgtgaagaagcactaccttagaaagtggcta
aaagcccctggaatgaacagttttgacatcagagagattttagattggcagtactacata
gagagattgggaggcactgtcatgaagatcattaccattcctgcagctctgcagaatgta
gccaacccagttccacgtatagcccaccccgactggttacagaagaagttactggaacgc
aatgatgtgttcaaacaaaagaaaatcagcgagatatttgcagcggctgctaaacctaca
caggatgacttggtcttcaagaagccagcagcaatacaagacatggaagatattggttcc
aggcctgcggtgggtcccaggggagtggccacctctaacaagcgtaaacgcacaagtgac
gagttctcacaaagtcaggatgactcccagctggacggttcccagtcatggagagatgcg
ttgggcccaccaccatcagcaggaaacactatggatgaacagttagcatggctggcatac
cacaagaagaagtgggccatgcagattcgtgagaggaaggagagcaggaaacgacgacgt
gtcgcgtttgacgacgggccatcacatatgccgttgacctcaagtagtcgtggtattgga
gggttcctgaggagaactgcccgctccatcatggacatgccctggcagattgtacagttg
atagagtcaggtcaccccggtcagttcaagctgtgggccctgattggcagtgacctacat
gccatgaagctgaacgtcccaaggatcttctatgtgaaccagaaaactcccaaggttgga
gaaggacagttatggcgaaaggtgataaagacactacctcgtgcccacccaatcatgaat
ctctatgagtattccgtacccgaggatgtgtaccaggagcacattaacgagatcagtgcg
gacctctcgtccccggaaattgagggcgtgtatgagacacacgtcccgctgctgtttagg
gctcttgtgcgtgtagggtgtgttaccatggtgaatagggacttctccaagcagatggct
ggacgggagaccgacacgtttgagctggaaaatttggagttccggactcttgcacaattc
tcgtaccttgagccaggatccatcaagaacctgtacctctatcatcatgtctgtggcagt
aagatgctgtatggattgtttttccccatgtccaaaaagggaactatatttgtggtggac
actgtccgaagtgatcagatgccgaacgtaaatgcaatgttcaatgctgaaagaaatgtc
aaggtatcgcagggtaaggatgaggccatgttgccggaggctggccacaagtttgactat
aagctagagaaagatgtgaaccaggtgttccggactgtgcagagaatgctgtcagcatac
aaggacgagaagcgtgggccaacgtacatagccgtacagtcttcactagatttccagcac
ctgatagctgacatgccaggactgggagatttcccgctagtaccaatacacatatctgac
agtgagaatctgtacaatgtgttggactggcagagggtgggatgtcgtcggatgctacaa
cactacatgaatgtggacatcatactgcaggccatgatggagcagtgccgataccttcat
atgcctgttggtaacttccctaaggacatcacaatggccggctgtgacattttcttcgct
agacatctgaaccgacataaccatgttctctggtgctccccgacggaaagacctgacctt
ggtggaaaggaagctgacgataatcgactcggaattcaggtggagaatttgacaacggag
attaacaatgccggggcatactccactgtttgtgttgagctggatatgaacagtcttgct
gtggataccattatagagtcgtcacatgtgaatgatcaagagggagcgagtgctatgagt
tttgacacaatgccccaggccaatattgaagagctagtacaaggacagggggcagctacc
atgatgactagctacgatgagacagcattgtgttccacagcttttaggattctgaagagt
atggtacagagctgggtacgagatgtaacggtgcattccaacgtgtttgcagacaaccag
atcatacacttctacagatggttacgcagcccaaatgctctactgtacgatcctgctctc
agaaggaccctccataacatgatgaagaaagtgttcatgcagctgatgggagagtttaag
agattgggttccaacattgtgtatgccaacttcaaccgcgtggtcctgtgtacgaagaag
cggcgattgatggatgccctggcctacgtggagtacattactaacactatcaaggggaag
gaactgtttcatctaatagagatgtcatatgaacagtgctgggaatatcttctatggcta
gaccctgcaaactatggaggcatcaaggggaagctaccctcagaggcagaggtggaggtg
gttgccccagagaccgcggaaaggggagaggacagtgatgaggaagagagggtcggggag
gatgaaggggaggagttgaataaaagcgacgaggaggaggcgccggaaattgagatgaac
tggaacatcatgcacttcctgcccactgctgcagcctgtcagaccaactttaatatgatc
atagcaggctacatactgtctgtgtacagcaacttccaggaagagcagcggcgactgaca
cccggtaacacaccggtaagacgtagaaacacaagccagtcccagagttacctccctgac
acaacaactacgccatcaagtgtgtctttcacacagaatctgatctctggggatcttgct
cagcagatgtttgctctgacccagaagatacatactaagctgagtggtaatcgtacgaag
ggagaactagcagaggagtttccccgacctcctggctcacatctcgcccttcacaaccct
gccctggagtttgtcaaggccatttgcaaggtgctatcactggatgcaaacatcaaccta
caagttagcaaacttcagcgtgaccttctcaagctgattggtattggcgagtttgcccca
gaggcagtcttcctcgatccctgtctgtcgtatgtgctcccggaggtgatctgtaaagcg
tgtaaccacatccgtgaccttgacttgtgcagggacccctaccttagccagtctggacca
ggtgcccagtggtcatgtatacagtgtaaagaagagtacgaccttgaagagatagagcag
tcactgattgactccgttcacaggaagtccatggcctacgtcctacaagatctcgagtgt
gccaagtgtaatcaggtgaaggatacaaacatgcggacctattgtacgtgtgcgggggag
ttcaagaacatcgccaccctggatgacatgggcaaacagctgcgcacattcaggggcata
gccagccattacaacatggtcctgctccaagagacggtggaatggatcctgaaactcaac
cctcagattatcgaccattga

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