Mya arenaria (softshell): 128234870
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Entry
128234870 CDS
T09995
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
maea
Mya arenaria (softshell)
Pathway
maea04140
Autophagy - animal
maea04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
128234870
04148 Efferocytosis
128234870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128234870
Membrane trafficking [BR:
maea04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
128234870
Hops complex
128234870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
128234870
NCBI-ProteinID:
XP_052805418
LinkDB
All DBs
Position
5:21537173..21557444
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AA seq
831 aa
AA seq
DB search
MASANWQTLGRVYYEKMEMYALEWGDQIDLSKFIVAAAPYGGPLALLQDISSNPNIGTTV
RPLLTVFTSAGKMISQMRWNSGRIKQLGWSHNEELLCVQDEGTVLVYDIFLTFIRQFGMG
QEAKETKVLDVRIFNSYKGTGIAILTCSFRVFIVNSIDDLRIRRLAEVPGLDSAPTAWGI
ITMDGQSQALVAKGNELYLIDHGGQYQKQEIEISTPLEAIIDMAISFNNKYIALFTESGL
VWIGSADLKKKYCEFNTKSPQKPTQFVWSGPGAVVAMWEKMMLVIGPDKDYIPFHHDSTV
SLVEEEDGIRIIGRDSVEFFRKVPQVTEQIFKIASMEPGAMLYEASREFERQSQRADEYI
RTVKDQLDVAVSQCIQAAGHEFEPSRQSALLKAATFGKCFLTDYNPEPFVNMCQMLRVLN
QVRKPSIGIPLTYTQLERLTMPVLIDRLVMRKYFYLAIRICQYLKLPEAEGASRILAHWA
CYKVQQKNEDDEHLARVIADKMGDTPGVSYSEIANKALEVGRPDLAIRLLDYEPKASRQV
PLLLKMKKEQLALNKAIDSGDTDLTYFVLLHLKDSMIQGEFFMAIRNIPEACSLFLQYCR
QQNPQMMEQLYYQEDNFQEEATCKVVNSFKQERLDDRLRILAEAKESYTKARNEFAAKQV
DEEIRLLKYQRRLEEELHREYTDLSLHETIHKLIIDNSHKMAETLRKEFKVPEKRYWWLR
IEALAEAGEWMELEKFSKTKKPVLSMEAFVDVCMKQNNKLEARKYVQRVTPDKKVACLIK
VGLLREAADVAFQNRSEDELNRVLRKCSVTDRAVEDQVKGYRQQLATAGKR
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgcaaactggcaaacacttggcagggtgtattatgagaaaatggagatgtat
gccctggagtggggggaccagattgacctgtccaagtttattgtggctgctgcaccttat
ggaggaccattagccttacttcaagacataagtagcaatcccaacattggcacaacagtc
agaccactgttgactgtgttcacctccgctggaaagatgatcagtcaaatgcggtggaat
agtgggcgtatcaagcagcttggttggtctcacaatgaggagctattgtgtgtacaagat
gagggcacagtgctggtttatgacatcttcctcacttttatcaggcaatttggaatgggg
caggaagctaaagagacaaaggttctggatgtgcggatattcaacagctacaaggggact
ggcatagcgatcctgacctgctcattcagggtgtttattgtcaacagtattgatgaccta
cgtatccgcagacttgctgaggtgccagggctggacagtgcccccacagcctggggaatc
atcaccatggacggtcagtcacaggccctggtagccaagggtaacgagctctacctgatt
gaccatggtggtcagtaccagaaacaggagatcgagatttctacaccattagaggcaatc
atagacatggcgatatcattcaacaacaagtatattgccctgtttactgagagtggtctt
gtctggattggctcagcagatctcaagaaaaagtactgtgagttcaacaccaagtcccca
caaaaaccaacacagtttgtgtggagtggtcctggtgcagtggtggcgatgtgggagaag
atgatgttggtcatcggccctgacaaggactatatacctttccatcatgattccacagtg
agcttagttgaagaggaagatgggatcaggattattggccgggacagtgtcgagttcttc
aggaaagtgccacaggtgacggagcagatattcaagatagcctcgatggagccgggggcc
atgttgtatgaggcttccagggagtttgagagacagagtcagcgtgctgatgagtatatc
cggactgtgaaagatcagctagacgttgctgtatctcagtgtatacaggctgctgggcac
gagtttgaaccttcaaggcagagtgcattgctcaaggcagccacgtttgggaagtgtttc
ttgacagactacaatccagagccgtttgtgaacatgtgtcagatgctacgtgtcctcaat
caagtgaggaaaccttccatcggcattccccttacatacacacaacttgagcgattgaca
atgccagtgttgatagatcgacttgtaatgaggaagtatttctacctcgccattcgcatc
tgccaatatctgaaactgccagaggctgagggagctagtaggatcctagctcattgggct
tgctataaggtccaacagaagaatgaagatgatgagcacttagcgcgggtcatagctgac
aagatgggagacacaccgggggtatcatactctgagattgccaacaaagctttggaggtt
ggcaggccagacctggctataaggctcctcgattatgagcctaaagcatccagacaagta
ccgctgctgttgaaaatgaagaaagagcaactggctctaaacaaggccatagacagcggg
gacacagacctgacctactttgtgttgcttcacctgaaggactctatgatccagggcgag
ttcttcatggccatcaggaacattccggaggcttgctcactcttcctacagtactgcaga
caacagaatccccagatgatggagcagctgtactaccaggaggacaacttccaggaggag
gccacatgtaaggtggtcaacagcttcaaacaagaaaggctagatgacagactgagaata
cttgcggaagccaaggaaagctacaccaaagctaggaatgagtttgcagccaagcaagtg
gatgaggagattcgactgctgaagtaccaacgacgccttgaggaagagctacaccgcgag
tacacagatctttccctgcacgagaccattcataaattgatcattgataattctcacaag
atggcggagacattacgtaaggagttcaaggtcccggagaaaaggtactggtggctgcgt
attgaagccctggctgaggctggtgaatggatggaactggaaaagttctccaaaacaaag
aaacctgttcttagcatggaggcatttgtggatgtctgcatgaaacaaaacaacaagctg
gaggcacggaaatacgtgcagagagtcacacctgacaagaaagttgcctgcctaatcaaa
gttgggctattgcgggaggctgccgatgtggcctttcagaatcgtagtgaagacgagttg
aaccgggtcctccgtaagtgctcagtgacggatcgtgcggtagaggatcaagtcaagggt
taccgacaacagttggccacagcaggaaaacgatag
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