Mya arenaria (softshell): 128235111
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Entry
128235111 CDS
T09995
Name
(RefSeq) SWI/SNF complex subunit SMARCC2-like
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
maea
Mya arenaria (softshell)
Pathway
maea03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128235111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128235111
03036 Chromosome and associated proteins [BR:
maea03036
]
128235111
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128235111
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128235111
PBAF complex
128235111
GBAF(ncBAF) complex
128235111
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_1
SWIRM-assoc_3
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
SpeFL
Motif
Other DBs
NCBI-GeneID:
128235111
NCBI-ProteinID:
XP_052805807
LinkDB
All DBs
Position
5:complement(26975656..27006294)
Genome browser
AA seq
921 aa
AA seq
DB search
MAAQRKKDGAPNIKFFESVDTIAQFDSVRTWLHKNCKKYTQADPPTNKSLASLVLQLLQF
QEEAFGKSVSNPPLTKLPMKCFLDFKPSGALCHILAAVFKFKTDQGWRRMDFQSPSRMDR
NVEMFMQIMKSLIANKCHVQPNVFIKPNLDKPLLTRLRDIIKQHEGLITEQEDEATHVIH
GMPAAAGSEDEWCRPVLKRERNALVHFWHTPDSYDNWMVDLGCDIEPEPAWSAPGPWEVT
ARWLLDLDEYNEWMNEEDYLVEEEYEGKKVKKKLPTKYSMDDLGGKGKKKRKRSPSPVPE
KKSKRKGGRQSTGAGLKKGRREEDEEDLTADMEDPAPETNIQEVTLSSTKTVSRSSKDND
LQPIKGGSVVDMEEEASQQVGEGAIDEDGEAPVEKKDKDEPEDSVTEQTHHIIIPSYASW
FDYNGVNAIERRALPEFFNGKNKSKSPEVYMAYRNFMIDTYRLNPMEYLTSTACRRNLAG
DVCAIMRIHAFLEQWGLVNYQVDQETRPTGMGPPPTSHFHILSDTPSGLQAANPPRINQP
SAAKQIVNFDEGKDGEEKKELANFGLRTDIYGKKNRDKGSATKTRDWTDQETLLLLEALE
LYKDDWNKVSEHVGSRTQDECILQFLRLPIEDPYLEEDCGHLGPLTYQPLPFSQAGNPVM
STVAFLASTVDPRVASSAAKAALETFSKMKDEVPPALIDAHVKTVEKAASEGKEVGPEFG
LDQTGIAGTAPEKEEEAKEEDKEKKDGADVKTEKEDEVKKEPMETDEGEKKPEEEKEKTD
DKADETKEGESKKAEEDGEKSTEATGGEVVKKLDDKERGNIATAAAAALSAAAVKAKHLA
AVEERKIKSLVALLVETQMKKLEIKLRHFDELEAIMDREREALEYQRQQLLQERQQFHME
QVRAAEYRARQVAMQQMSSEK
NT seq
2766 nt
NT seq
+upstream
nt +downstream
nt
atggcggcccaaagaaaaaaagacggcgctccaaatataaaattctttgaatctgttgat
accatagctcaattcgactccgttaggacatggttgcataagaattgcaaaaagtacacc
caagcagacccacccaccaacaagagtcttgcaagcctggtgttacaactgctgcaattc
caggaagaagcgtttgggaagtctgttagcaatccgccacttacgaagcttcctatgaaa
tgcttccttgacttcaagcctagtggagcactttgtcatattttggctgctgtgtttaaa
ttcaagactgaccaaggatggcgaagaatggacttccagtctccctcgcgtatggaccga
aacgtggagatgttcatgcaaatcatgaaatcactgatcgccaacaagtgccatgtgcag
ccaaatgtctttatcaagcccaatctggacaagcctctgttaactcgtcttcgagacatt
atcaagcaacatgaaggtctgatcacagaacaggaagatgaagcaacccacgtcatacac
gggatgccagcagctgccggcagtgaagatgaatggtgccgcccagtgttgaagagagaa
agaaacgcccttgttcacttctggcatacccctgacagctatgacaactggatggtggac
cttggatgcgatattgagccagaaccagcctggtctgctcctggaccctgggaggtgaca
gcacgctggttgttggatcttgatgaatacaatgagtggatgaatgaggaggattatctt
gtggaagaggagtatgaagggaaaaaagtgaaaaagaagctgcctacaaaatacagtatg
gacgatcttggaggcaaaggcaagaaaaaaaggaaaaggtctccatctccagtaccggag
aagaaatcaaaacggaaaggaggccgccagtctacaggtgcggggcttaagaaggggcga
agagaagaggatgaggaggatttgacagctgatatggaggacccggccccagagacaaac
atacaggaagtcacactgtcatcaacaaagactgtatcccggagcagcaaggacaatgat
ttacaacccattaagggaggttctgtggtcgatatggaggaggaagcatcgcaacaggtt
ggagagggagctattgatgaagatggtgaagcaccggtagagaagaaggacaaagatgaa
ccagaggacagcgttactgaacaaacccaccacattatcataccaagctatgcatcatgg
tttgactacaatggggtaaacgctatcgagaggcgagctctgccagagttctttaatggg
aagaataaatccaaatcgcctgaagtatacatggcgtacaggaatttcatgattgacaca
taccgactgaaccccatggagtacctaaccagcacagcatgtagacgaaatctggctggt
gatgtctgtgccattatgaggattcatgcattccttgagcagtggggcctcgtaaattac
caagtggaccaagaaaccagacccacagggatgggaccccctcccacctcacacttccac
attctgtctgacacgccttctgggctccaggctgcaaacccaccaagaataaaccagcca
tcagctgcaaagcagattgtcaactttgatgaggggaaggacggtgaagagaagaaggaa
ctcgccaactttggtctgcgaactgacatctacggcaagaaaaatagggataagggttct
gccactaaaacccgagactggacggaccaagagacgctgctactcctagaggcacttgag
ttgtacaaggatgactggaacaaagtgagcgagcatgtgggatcgaggacccaggatgag
tgtatcctacagttccttaggctgcccatagaggacccctacctggaggaggattgtggt
caccttgggcctctgacgtaccagcccctaccattctcccaggctggtaaccctgtcatg
tcaaccgtggcattcctggcttccactgtagacccacgtgtggcaagctcagctgcaaag
gccgcccttgagacattctctaagatgaaggacgaggtacctccagccctgatagatgcc
catgtgaagacagtagagaaggctgcatcagaggggaaggaggttggaccggagtttggc
ctggaccagaccggcattgctggaaccgcaccagagaaagaggaggaagccaaggaggaa
gacaaagagaagaaagatggggcagatgtcaaaactgagaaagaagatgaagtcaagaag
gagccaatggagacggatgaaggagagaagaaacctgaagaagagaaggagaaaaccgat
gacaaggctgacgagacaaaagagggtgaatctaagaaggcagaggaagatggagagaag
agcacagaggccactggaggagaggttgtgaagaaactggatgacaaggagagaggaaac
atcgctactgctgccgctgctgctctgtctgctgccgctgttaaggccaagcacctggca
gcggttgaggagcgaaagatcaagtctctggttgctctgctggttgagactcagatgaag
aaactggaaatcaaactgagacacttcgatgagctggaggccatcatggacagggaacga
gaggcgttggagtaccagcgacaacagctactgcaggagagacagcagtttcacatggag
caagtgcgggcagcagagtaccgggcccggcaagtagccatgcagcagatgagtagtgag
aaataa
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