Mya arenaria (softshell): 128235414
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Entry
128235414 CDS
T09995
Name
(RefSeq) contactin-like isoform X1
KO
K06761
contactin 3/4/5/6
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
maea04515
]
128235414
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
maea00537
]
128235414
Cell adhesion molecules [BR:
maea04515
]
Immunoglobulin superfamily
Contactins
128235414
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
maea00537
]
Others
128235414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
I-set
Ig_2
ig
fn3
V-set
Ig_DSCAM-DSCAML_C
Izumo-Ig
Pur_ac_phosph_N
Lectin_C
UL45
Fn3_VIN3
Motif
Other DBs
NCBI-GeneID:
128235414
NCBI-ProteinID:
XP_052806193
LinkDB
All DBs
Position
5:2844479..2885319
Genome browser
AA seq
1236 aa
AA seq
DB search
MTLNVFGTFLLLGLWCPALVTGQGCPLPWQTFEQSCYLFYMTETLDYAHATEMCYKHGAS
LVSISSQTEFSFLTQQLSVRDQTGHSWYTSGMTDAGMSVIKWQGDGTVSQGDDWWLSLQH
RNLTSHRVVFRADVYRWGLSKSVSSASLAAVCEIAVLEAHRIGRNDRDFTYGTNITDPRL
APHGPMFILHPANLVVVPDSRSTTDGEHLTISVECFADGIPAPTYRMLQTRENGTVVTIT
TNYDPRYTLTGGRLSIVHPVEALDGGMYQCEASNVFGTVYSDLANITFGVLEQFPNVPRA
PIVVLEYQSAAIECDPPQFRPAVTYQWYRGTVADFVRPELNPHMFISSNGKLYFSEVTQT
DEADYNCIVKLSPGKDPMSTTQPPSRISLPIPLKIGGSEPAMWGPEIADGFIASFPNKPL
VGDAVKLECLAYGTLPLIYSWSRKDKSLPEGAIQTDHNRVLTLPDVSLDDAGTYHCTVSR
TTGNTAVAVHHLVIETRPYFISPLPNTHADVGSRLTWRCEAKAIPRAVYMWYKDGHPLFP
VPGDLHVSTNVLTIMSVDAARHGGMYQCVALNTHGVSYSGAQLRVLAFKPTFAKDPLQES
ISAAIGSQVRLDCSPEAAPKPEFSWSRNGVDLNAVPDDGSSRLRLMADGDLLLAEVVAAD
AGQYCCTAANSLGTDNSCGTLTVVQNTVLTTKPTNTFGRVNATSVLMCSASFPGGADSIY
MWSFNDRLIDTKRQKQYTIGTPQSPGTLYITNAQYHYAGTYTCSAWTPHGAVNASAVYIV
EGPPGPPAGVFVADGGVSNSTVTLVWTEGAKHGPDVDIHHIEACTEHNHTWVVIAAGIPA
AGTIWEGGDRRHLYHVTNLKPGNGYYFRVRGANGLGVGQPSLSSTMYRIPGAPPIIYPRE
VGGGGGVVGLLTITWQPLPPEDQGSGGVGYRVFWRLANTTRYSEVNLTENIGQYVVTVGL
DNFWLLYEVKVAAFNNLGQGPISPDRVFIYSAEDIPKGAVTNVYAWPYNSTAIQVTWDIV
PNIRQFMGGTLLGYQVNYKFRDDPDAGWDAISWRGETSYGIVIGLDVYTWYSVDMQVLNT
AAMGPRSEIYHARTFKDAPKLYPQEVWVYSHSGSSVRLKWRGVNTQTGEENIEGYVVRYW
QTTDDIRSATDVRTERVETEVVIYGIQKDTVYECRVFAFSRGGDGQHSETRYFTLGGLIP
FDPSITDVMAAASAVVPNLTLCLLACLLFHFYRHFN
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgacgttaaatgtgtttggaacatttctgttgctcggactttggtgtcccgcgttggtc
accggccagggatgtcccttgccgtggcaaacattcgaacagtcgtgttacttgttctac
atgacggagacgcttgattacgcccacgccacagagatgtgctacaaacacggggcgtcc
cttgtgtcgatcagttcccagacagaattctcgttcctgacacagcagctttccgtccga
gatcagactggacactcgtggtacacaagcggaatgacggatgccgggatgtctgttatc
aagtggcaaggggacggcaccgtcagccagggtgacgattggtggctgtccctccaacac
cggaacctcacatcccacagggtcgtctttagggctgatgtttatcggtggggactgagt
aaatccgtctcctcggcgtctctggcggccgtctgtgagatcgcggttctcgaggcacac
aggatcggacggaacgacagggacttcacgtacggtacaaacataacggacccgcgcttg
gcgccgcacggccccatgttcatcttgcatcctgctaacctcgtggttgtccccgactcc
cgctccaccacggatggcgaacaccttaccatcagcgtcgagtgcttcgccgacggaata
cccgcgcccacctaccggatgctgcagacacgggaaaatggtaccgtcgtcaccatcacg
acgaactatgatccgagatatacgcttaccggcggaagattgtccatagtgcacccagtg
gaggccctggatggtggaatgtaccagtgtgaggccagtaacgtgttcggcacagtctac
agtgatctcgccaacatcacattcggagtgttggagcagttcccgaacgtcccacgtgct
ccgattgtggtcttggagtaccaaagcgccgccatcgagtgtgatccgccacagttcagg
ccagctgtgacataccagtggtatcgagggactgtcgccgatttcgtgcgaccagagctc
aacccgcacatgttcatctcatccaacgggaagctttacttctcagaggtgacacagacg
gacgaggcagactacaactgcatcgtgaagctttcccccgggaaagaccctatgagcact
acccagccacctagtcggatatctctgcccatcccactaaagatcggaggcagcgagcct
gccatgtggggtccggagatagctgacgggtttatagcatcctttcctaacaaaccgctg
gtaggggacgcggtcaaactcgagtgtctcgcttacggcacacttccgcttatatactcg
tggtctcggaaggacaaatcgctgccggaaggagcgatacagacggaccacaaccgcgtg
ttgacgctaccggatgtgagcctcgatgacgccggaacgtaccactgcaccgtctcccgc
acgacaggaaacacagccgtcgccgttcatcatctcgtcatagaaacccgtccatacttc
atctccccgctccccaacacgcatgcggatgtggggagccggctcacgtggcggtgcgag
gcgaaggcgatcccgcgggccgtttacatgtggtacaaggacggacatccactgtttccg
gtacccggggacctccacgtctcaactaatgtactcacaatcatgagcgtagacgcggcg
cggcacggcgggatgtatcagtgtgtggcactcaacactcacggtgtctcgtacagcggc
gcccaactcagggtcctcgcattcaagcctacattcgcgaaggatcctctacaggaaagt
ataagcgcggcaatcgggagtcaggtgcggttagactgctccccggaggcggcccctaaa
ccggagttctcatggtcaagaaacggtgtggacctgaacgctgtaccggacgacggcagc
tctcggttgcgactgatggcggacggcgaccttctgttggcagaagtggtcgcggcggac
gctggccagtactgctgcaccgctgccaacagcctaggcaccgacaatagctgcggaact
ctcacagttgttcagaacacagtgctgacgacgaaacctaccaatacgtttgggcgcgtg
aacgcaacttccgttctgatgtgttccgcctcgttccccggaggtgccgacagcatttac
atgtggagcttcaatgatcgccttatcgatactaagcgccagaaacagtacacaattggt
actccacagtctcccggtactctgtacatcacaaacgcccagtaccactatgcgggaacc
tacacgtgctcggcatggaccccgcatggcgcagtgaacgcttccgccgtgtatatcgtg
gagggacccccgggacctccggcgggtgtgtttgtggccgatgggggcgtttccaacagc
acagtgacgttggtgtggacggagggcgctaagcacggaccggatgtcgacattcaccac
atagaggcctgtacggagcacaaccacacatgggtcgtcattgccgcaggcataccagca
gcagggacgatatgggagggtggggaccggcgtcacctgtaccacgtgaccaacctgaaa
cccggaaacggctactacttccgggtgagaggagcaaacgggctgggggttggccagccg
agccttagttcaacgatgtatcggatccccggggctccacctatcatctacccacgtgag
gtcggcggcggtgggggtgtagttggtctacttaccataacatggcagcccctacccccg
gaggaccagggctcgggtggagtcgggtaccgagtgttctggcgcctcgctaacaccaca
agatacagcgaggttaacttgacggagaacattggtcagtacgtggtgacggtgggcttg
gacaacttctggctgctatatgaggtcaaggtcgcggctttcaacaacctcggacaggga
cccatctcgcctgacagggtgttcatctactccgcggaggacatcccgaagggcgcggtt
acgaacgtgtacgcgtggccgtacaactcgaccgccatccaggtcacgtgggacatcgtg
cctaacatcaggcaattcatgggagggacacttctagggtaccaagtaaactacaagttc
cgtgatgaccctgacgctggttgggatgccataagctggcgcggtgagacgtcatacggc
attgtgattggtctagacgtgtacacgtggtactcggtggatatgcaggtgctcaacact
gccgccatgggaccgcgctctgagatctaccacgcgcggacatttaaagacgccccgaag
ctgtatccccaggaggtatgggtgtattcgcacagcggaagtagtgtgcgcttaaagtgg
aggggcgtcaacacgcagacgggcgaggagaacatcgagggatatgtggtgcgttattgg
cagacgacagacgacatccgatcagcgacggacgtacgaacagagcgggtggaaacggaa
gtggtgatctacggaatccagaaggacacggtgtacgagtgcagggtgtttgccttcagc
cgcggtggggacggacagcacagcgagacacgatacttcactctcggtggccttataccg
ttcgacccttccataacagatgtaatggcggcggcgtcggcggtggttccaaacctgact
ttgtgtttactggcctgtctcctctttcatttctatagacattttaattga
DBGET
integrated database retrieval system
