Mya arenaria (softshell): 128235839
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Entry
128235839 CDS
T09995
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128235839
04121 Ubiquitin system [BR:
maea04121
]
128235839
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
128235839
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
128235839
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Gene cluster
GFIT
Motif
Pfam:
Dimer_Tnp_hAT
zf-BED
DUF659
MCRS_N
DUF3439
eRF1_1
Focal_AT
Motif
Other DBs
NCBI-GeneID:
128235839
NCBI-ProteinID:
XP_052806593
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All DBs
Position
5:complement(59792290..59794784)
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AA seq
596 aa
AA seq
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MADGEEAFVALIKPTKVTSKIWDYFGNPAYDRNGKRSVDRENAVCRLCRKMVKNCRGTQN
MWFHFERHHKAEHAKISKPNVPQNPEISTKPIVKNEPDNMPTKSQKTVPEMYAKTQHYPQ
KSERSTEITQAVAKFIAGDLQPLSVVGKAYFKNILSVMDPKYELPSRRYFTMNVIPEMYT
SVRTNVELELKECESLAITTDGWTSRACQSYLTVTAHGLDSNWKQHNHVLATRMLDVSHT
GVNVGEALAGVVAEFGLQRPSGTAVVTDNAANMDIAAKAAMLTPHVKCFAHTVNLACQKS
VKVQEFQPLLTKVRRIVAFFHKSTTATALLKLNQKNKELKLIQDVSTRWNSTYDMLQRYV
DEHEAITATLSSSELRKNAKGIVTLSPDEITDLEAVIKVISENDSDLIKAMKGAIRQDMT
KRYTQVEVEEFTWMCTALDPRFRSLPDLSSEKREAVYTNLIAKTETVKTQVKSEVSPDAA
TPSTSTTTALPALPALPGMTDENANKVDLAIGLYREVEKYRSEIASPLDTDPQVWWRSHE
NDYPNLSRLDKHTLHIPATSVASERVFSVAGDVVTATRSRLASDMVDVLVFLKHNL
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggtgaagaagcatttgttgcgttaattaaaccaactaaagtaacttcaaag
atttgggactattttggaaatccagcgtacgacagaaatggtaaacggtcggtagacagg
gaaaatgctgtttgtaggctatgtagaaagatggttaagaactgtagaggaacacaaaac
atgtggttccactttgaaagacaccacaaggctgaacatgcaaaaataagtaaaccaaat
gtgccacaaaatcctgaaataagcactaagcccattgttaaaaatgaaccagacaacatg
cctactaaaagtcagaaaactgttcctgaaatgtatgcaaaaacacaacattatccacaa
aagtcggaaaggtcaacagaaatcacacaagctgtggcaaagttcatcgccggtgaccta
cagccattatccgtagtcggaaaggcatactttaagaacattttgtctgtgatggaccca
aaatatgaactaccatctcggagatatttcacaatgaatgtgataccagagatgtacaca
tcagttcgtaccaatgttgaactggaacttaaagaatgtgaaagtttagctatcacaaca
gatggttggacatcccgtgcctgtcaaagctatcttacagtaactgcacatggccttgat
tctaactggaagcagcataatcatgtccttgcaacacgaatgcttgatgtatcccatacc
ggggttaatgtaggtgaggcccttgccggtgttgtagccgagtttggtttgcagagacca
tcaggtacagctgttgtgactgacaatgctgcaaatatggacattgcagcaaaagctgcc
atgctcactccacatgtgaagtgtttcgcccatactgtgaatttggcttgtcaaaagagt
gtcaaagttcaagaattccaaccacttctaacaaaagtaagaagaattgtcgcattcttt
cacaaatcaactacagcaactgctcttctgaaattgaaccaaaaaaacaaggagctcaaa
ctaatccaggatgtgtccacaagatggaacagtacttatgacatgcttcaaagatatgtt
gatgaacatgaagcaatcacagccaccctgagctccagtgaactaaggaaaaatgcgaaa
ggcattgtgaccttgagtccagatgaaattacagatcttgaggcggttatcaaggtcatc
tcagagaatgattctgatctcatcaaggccatgaaaggtgccattcgacaggacatgact
aaaaggtacacacaagtcgaggttgaagaattcacgtggatgtgcacagcactagaccca
cgatttcgatcactcccagacctgagcagtgagaaacgagaggcggtgtacaccaacctg
attgctaaaacagaaactgtcaaaacacaggtaaaatctgaggtatctccagacgcagcc
acacccagtaccagtacaactactgccctacctgcccttccagcactaccaggcatgact
gatgaaaatgccaataaggtggacttagcaataggtctgtatcgggaggtggagaaatac
cgctctgagattgcatctccattggacactgacccccaggtatggtggaggagtcatgag
aatgactatcctaatctgagcagactggacaagcacaccctccatattccagccacatct
gttgcaagcgagagggtcttcagtgtagccggtgatgttgtgactgccacccgaagcaga
ctggcctcagacatggtggacgtactagtgttcctaaagcataatttgtga
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