Mya arenaria (softshell): 128236294
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Entry
128236294 CDS
T09995
Name
(RefSeq) BLOC-2 complex member HPS3-like isoform X1
KO
K20190
Hermansky-Pudlak syndrome 3 protein
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128236294
Membrane trafficking [BR:
maea04131
]
Endosome - Lysosome transport
Others
BLOC-2 complex
128236294
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPS3_C
HPS3_N
Aip3p_Bud6_N
Motif
Other DBs
NCBI-GeneID:
128236294
NCBI-ProteinID:
XP_052807140
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Position
5:complement(32994885..33013831)
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AA seq
1119 aa
AA seq
DB search
MVKVLKCYNFKSSNIIENVISEPNCFDIGKNFLFIGTHDCTVKVFKNTQPPKKWQKYCFF
QTGALVTQVEYNKAGDYVATVEKKVSRQSEVVSVKVYLNWHIAHQSDSYRTRVRVAGLGY
KSSNVQTGKRLEVVDVPIEGKVSAMSTCAETGNLVFACNHIAKLFHLVEKTIPNSEETFL
DMIVFLEISFGYDLTKICLCEEFLVCSSSQFVQVFEVQIRDRVDDMQGRSVDSQGPSPRR
MKASSVLSSLNIAQNISSPETVRERTVPVIREQPKFSAVGERGSSTPSPGPSFPSKNTTS
LIEDDTDFVQWSFSSNPLARKSTGLAGAQLHGYHDNKTIKLKGLENLGKPARFEPPVPDI
KDLRGGNHHTTGQTSLKQVMYHYLDQGHSSWLHLQLIPTYTIGGFTSLSGHQASIPVHSG
RRTSRVGMTCLMSSPRVGQIFSLLPHPLLLSSYEYSSNALQVESSGPLLYVLHENTLEIY
TSRSHIFAVLNTEKMDHVTKTCPDTSVEICICGVQHLIGPRLIALGDKHIALFNKIDNSW
NVNVLEKPSVPDLYTDMVNFGKKNQQLAAHTYEHMLLEGHMLLTSSLIGQSLSQSDAMEV
QELIRTSSALLGEYYALSDAPGWQSCLPYCIMSELNVQEMVSNIRQRKKEYKLRYGQGIV
QYLKYVLFLEEDPLDLIEVEGDTLLETCFEAMPDRLSDVLLFSRIRTYSAETAINFLKKT
SKYIRPSDSRSSTKYRLALASLNLQLCEPDMALGLLSAIDKRELVDLCVENHHILHVAMT
EFSPLAQLMRCHDADLLISILIQLHDMGTMPTDLAIALLQGRSNVPEAHKNSHLMAYLEA
LVCDEKRKFCFEDAVGQLCEMYVLRLAEWEPPSIRQLSPVISLRLPKGGHFGRRHGWLDQ
LPPFSGTQSITTTCQYVVPSSESRRAGKQSQQWLQCQKTDNVTCSCFMCNEDLLKIQSLL
CYPEVSSTVCDRVLPLLEANKHHTFSPSLNILCQVHTDIDAAVRLVIESHMTVAAEFGAS
VLKSDVDKWEKLLNKMLEKVFKAEEANQSTEEFMPCVKDVLAEMSKHLKPEEFLKVLPGN
GNFFFFMPYIQQCLAIHKGAKLKEHFVELGGKMVQHSCE
NT seq
3360 nt
NT seq
+upstream
nt +downstream
nt
atggttaaggtgttaaaatgttataattttaagtcatccaatataattgaaaatgttatt
tcagagcctaattgttttgacattggcaaaaacttcctgtttataggaactcatgattgc
acagtgaaggtcttcaaaaacactcaaccgcctaaaaaatggcagaaatattgcttcttt
caaaccggtgctcttgttacacaagttgaatataataaagctggagactatgttgcaaca
gttgaaaagaaagtttctaggcagtctgaggtggtctcagtcaaagtgtacctgaactgg
cacattgctcatcaaagtgactcataccggaccagagtgagggttgctggcctcggctat
aagagtagcaatgtacagactgggaaacgacttgaggttgtggatgtgcccattgagggg
aaagtttctgcaatgtcaacatgtgcagagactggcaacttggtctttgcctgtaaccac
attgccaaacttttccatctggttgagaaaaccattccaaattctgaagaaacctttctg
gacatgattgtgtttcttgaaatcagttttggatatgaccttaccaagatatgcctctgt
gaagaatttcttgtctgcagtagctcacaattcgtccaggtatttgaggttcagataagg
gaccgtgtggatgatatgcagggacggtcagtagacagccaagggccatcaccgaggcgg
atgaaggcctcaagtgtgctttctagtctcaatatcgcccaaaatatcagttcccctgag
acagtcagggagaggactgtaccagtgattcgagagcagcctaagttttcagcagttggt
gaaaggggctcatctactccaagcccagggcccagttttccatcaaagaacaccacttcc
ctaatagaggatgacacagacttcgtacagtggtctttctcttccaatcccctggccaga
aaatcaacaggacttgccggagcccaattacacggttaccatgacaacaagacaataaag
ctcaaaggtttggaaaatctgggaaagccggcaaggtttgagcctcctgtgcctgatatc
aaagacctcagaggaggaaatcaccataccacaggtcagacatcactaaagcaggtcatg
taccactatctagatcagggccattcatcctggcttcatcttcagttgattccaacatac
acaataggagggtttaccagtctatctggccaccaggccagtataccagtccactcaggg
cggagaaccagccgggttggcatgacctgtctcatgagcagccccagagtgggacaaata
ttctcactactgccacacccactccttctgtcatcatatgaatactcttctaatgctttg
caagtagaaagcagtggccctctgttgtatgttctacatgaaaacactctggaaatctac
acttcccgcagccatatttttgccgttttgaataccgaaaaaatggatcatgtcacaaag
acttgtccagacacaagtgtggagatctgtatctgtggagtccagcatctgattggtcct
cgacttattgcccttggtgacaagcacattgccctcttcaataaaatagacaattcctgg
aatgtgaatgtattagagaaaccatcggtaccagacctttatacagacatggtgaatttc
ggaaagaaaaaccagcaattggcggctcacacatatgagcacatgttgctagaaggtcac
atgcttctgacgagcagtctgattggtcagtctcttagccaatcagatgccatggaagta
caagaactcatcagaacttcatcagcactgcttggtgaatattatgccttgagtgatgcc
cctggctggcagtcttgtctgccctactgcatcatgtcagaactcaatgtgcaggagatg
gtctccaacattcggcaacggaagaaggaatataagctgagatatggccaaggcattgtg
caatatttgaagtatgtcttgtttcttgaagaggacccacttgatctaatagaggtagaa
ggtgatacactcctagagacgtgttttgaggccatgccagacagactgtcggacgttctg
ctgttttcacgtatcagaacttactctgcagagacggccattaactttctcaagaaaaca
tccaaatatatccggccatcagacagtaggtcaagcacaaaatatcgcctggctctagcg
tcccttaacctacagctgtgtgaaccagatatggccctgggtcttctctccgccatcgat
aagagagagctggttgatttgtgtgtagagaatcatcatatcctacatgtggccatgaca
gagttttctcccttagcacagttgatgcgctgccatgacgcagatttactcatctcaata
ctcatacaactccatgacatgggtaccatgcctaccgatctggccatagcacttttacag
ggacggtcaaatgttcctgaggcccacaagaattcccatctgatggcgtacctggaggct
ttagtctgtgatgaaaaaagaaagttctgttttgaagatgcagtgggtcagttgtgtgag
atgtatgtactgaggctagcagaatgggaacctccatcaataaggcagctgtcaccagtc
atcagcctgaggcttccaaaaggtggacattttggtcgccgtcatggttggttggatcaa
cttcctccattttctggtacccagtcaataacaacaacctgccagtatgtggttcccagc
agtgagtccagacgagcagggaaacagtcccaacaatggctgcagtgccagaagactgat
aatgtcacatgtagctgcttcatgtgtaatgaagacctgcttaaaatacagtccctgttg
tgttacccagaagtctcgtccactgtgtgtgacagagttctcccccttctggaggcaaac
aaacatcacacattctccccctctctcaacattttgtgccaagtgcacacagacattgat
gctgccgttcgattggttattgaaagtcacatgactgttgctgctgagtttggtgcatct
gtcctcaaatctgatgtggataagtgggaaaagttgttaaacaaaatgctggagaaagtg
ttcaaggccgaggaagccaaccagtccacagaagagttcatgccttgtgtgaaagatgta
ctagcagagatgtccaagcacttgaaacccgaggaattcctgaaagtgttgccaggcaac
gggaactttttcttctttatgccttatatccagcagtgccttgcaatacacaagggtgca
aaattgaaggaacactttgttgaactcggggggaaaatggtgcagcacagttgtgaatga
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