Mya arenaria (softshell): 128236397
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Entry
128236397 CDS
T09995
Name
(RefSeq) tumor susceptibility gene 101 protein-like
KO
K12183
ESCRT-I complex subunit TSG101
Organism
maea
Mya arenaria (softshell)
Pathway
maea03250
Viral life cycle - HIV-1
maea03272
Virion - Hepatitis viruses
maea04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
128236397
03272 Virion - Hepatitis viruses
128236397
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
128236397
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128236397
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
maea04147
]
128236397
Membrane trafficking [BR:
maea04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-I complex
128236397
Exosome [BR:
maea04147
]
Exosomal proteins
Proteins found in most exosomes
128236397
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UEV
Vps23_core
UQ_con
DUF5685
Tautomerase_2
FapA
Motif
Other DBs
NCBI-GeneID:
128236397
NCBI-ProteinID:
XP_052807205
LinkDB
All DBs
Position
6:52076344..52090130
Genome browser
AA seq
439 aa
AA seq
DB search
MSNFDQFLKTSLKKYRHPDVAKSDVVTAFRTFTDLRPKVEDFVFNDGSTRNLLQLDGTIP
VTYKGNVYNIPICIWLMDTHPYNPPMVYVKPTTTMQIKSGRNVDQNGKVDLPYLREWKYP
DSDLYGMIQILTIVFGEEPPVYSRSAPPPSQPPRYPGGNTPYPASGGYGMPMPGVSGPQA
SYPSNTPYPNPGGYPASPGTGYPGQFSGYNPPASGYQGYPSSYPSTTATSSYPSNPPYPS
STPYSSSSASSYPTTESTASNYNNISGTSTVTEEHLKASLLSAVEDKMRRSLRETFQQAQ
AEMDVLYKTQADLLKGKDKLEQMMADLDKEKVEIEGNVKLLRQKDQEVKEALGRMENQDQ
ISIDEAVDTTAPLYRQLLKAFAEEQAIEDAMYYLGIALRKNVIDLEVFLKNVRELSRKQF
MLRALIQKCREKAGLPAIA
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacttcgatcagttcctgaaaacatcactgaaaaagtatcggcatccggatgtg
gcaaaatcagatgttgtgacagcttttagaacattcactgaccttcggccaaaggtggag
gattttgtgttcaatgatggctcaacaagaaatttgctgcaactagatggaacaatacca
gtcacatataaaggcaatgtatacaacatcccaatctgtatttggttgatggacacacat
ccatacaatcccccgatggtgtatgtcaaacccacgaccaccatgcagatcaagtctggg
aggaatgtggaccagaatggaaaagtagatctgccatacctacgagaatggaaatatcct
gactctgacctctatgggatgatccagatcttgacaattgtatttggggaagagcctcca
gtttattctaggtcagctccacccccctctcagcctcccagataccctggaggaaacacg
ccataccctgcctcagggggatatggtatgccgatgccgggagtaagtggtcctcaggcc
agctatcctagcaacacaccctatcctaaccctgggggttacccagcatctcctgggaca
gggtacccaggacagttctctggatacaatccaccagctagtggttaccaaggttaccct
tcaagctatccatcaacaacagcaacatcaagttaccctagcaacccgccatatccctca
tccacgccctatagttcatcttcggcaagcagctaccctaccacagagtcaacggcctca
aactacaacaacatttccggcaccagcactgtgacagaggaacacttgaaggcctctctg
ttgtcagctgtggaagataagatgagaagaagcctgagggagacttttcaacaagcacag
gcggagatggatgttttgtacaaaacccaggcagatttgctcaagggcaaagataaactg
gaacagatgatggctgatctcgacaaggaaaaggtggaaatagagggaaatgtgaaactg
ttgcgacaaaaagatcaggaagttaaggaagcgctgggacgcatggaaaaccaggaccag
attagtatagatgaggctgtagatacgaccgcgccattgtacagacaattattgaaagct
tttgcagaggaacaagcgattgaagatgcaatgtactaccttggtattgcattgaggaaa
aatgttattgatttagaagtatttttaaagaatgttcgagaattatcgagaaaacagttt
atgctacgggcattgatacaaaaatgtagagaaaaagctggactacctgcgattgcatga
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