KEGG   Mya arenaria (softshell): 128236541
Entry
128236541         CDS       T09995                                 
Name
(RefSeq) pre-mRNA-processing factor 17-like
  KO
K12816  pre-mRNA-processing factor 17
Organism
maea  Mya arenaria (softshell)
Pathway
maea03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    128236541
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:maea03041]
    128236541
Spliceosome [BR:maea03041]
 Complex C
  Other components
   Step II factors
    128236541
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_WDR3_1st WD40_Prp19 Beta-prop_THOC3 WD40_CDC20-Fz Beta-prop_WDR3_2nd WDR55 EIF3I WD40_WDHD1_1st Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_EIPR1 WD40_RFWD3 ANAPC4_WD40 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_DCAF4 Beta-prop_WDR41 Beta-prop_WDR75_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_SPT8 Beta-prop_IFT140_1st Beta-prop_ACSF4 WD40_MABP1-WDR62_1st Beta-prop_SCAP Beta-prop_VPS8 Beta-prop_WDR19_1st PQQ_2
Other DBs
NCBI-GeneID: 128236541
NCBI-ProteinID: XP_052807418
LinkDB
Position
6:complement(24783433..24798398)
AA seq 574 aa
MEAILSYDSDTSENSDKSDGGHYTATDLFAHLKPVDDTNSVSKTIALNSTPVAIPLEDVS
GIKHIDPKTKEVKYNPKYDELYAPQVGPTNPYKTRQATAIRNSLAGYVEDAHVSSFQFEN
QRKTFHSYGYAIDPTVDSETTSGTKMLGDSIALEENKGLTAFEKAKKRPEDKRKRHLNDD
PSNIEGFIGPWGKFVDEQTVMKPNEEEKAELDEILAKRAKTGKQTEEKPAEEKTTLHIKD
AYDYQGRSYLHVPQDVGVNLKSEYPPEKCFIPKKLIHTWAGHTKGVAQIRWFPKSAHLLL
SASMDSKIKIWEVYNDRRCVRTYLGHKQAVRDINFNNSGTEFLSCAYDRYCKLWDTETGE
CKARFTSRKVAYCVKFHPEEDKQHLFVAGTSDKKIVCWDTRSGEIVQEYDRHLGAVNTIT
FVDQNRRFVSTSDDKSLRVWEWDIPVDFKYIADPSMHSMPATVLSPNGKWLACQSMDNKV
TVFNVLNRFKYMRKKTFTGHMVAGYACCLDFSPEMTYLISGDADGKLYIWDWKTTKLYSK
FKAHDDVCIAAIWHPHETSKVATAGWDGVIKYWD
NT seq 1725 nt   +upstreamnt  +downstreamnt
atggaagcgattttatcttacgacagtgatactagtgaaaatagtgataaatccgatggt
ggacactatacagctactgatctttttgctcatttaaaaccagttgacgatacgaattca
gtctcaaaaactatcgctctaaattcaacgcctgtcgccattccactggaagatgtttct
gggataaaacacatagaccccaaaacaaaagaagtgaaatacaacccaaaatatgatgaa
ctatatgcacctcaggttgggccaaccaacccatacaagactcggcaggcaaccgccatc
agaaactcactggcaggatatgtagaagatgcacatgtgagcagtttccagtttgagaat
cagcgaaaaaccttccacagctatggatatgctattgacccgactgttgactcggaaaca
acgtcagggactaaaatgctgggtgactcaatagcactggaagaaaataaaggtctgaca
gcgtttgagaaggcaaaaaagcgccctgaggacaaaagaaagagacacttaaacgatgat
cccagcaatatagaggggtttatagggccctgggggaagtttgtggatgaacagacagta
atgaaacctaatgaggaggagaaggcagagttggatgagattcttgccaagcgggcaaag
acgggtaaacagacagaggaaaaacctgcagaggagaaaaccacactacacatcaaagat
gcatatgattaccaaggccggtcatatctgcacgtgccgcaggatgtgggtgtgaacctc
aagtcagaataccccccagaaaagtgcttcatacccaagaaactaatacacacttgggca
ggccacacgaaaggtgtggcacaaatcagatggttccccaaatctgcccatctcttactg
tctgctagtatggactcgaaaataaagatctgggaggtctacaatgaccggcggtgtgtc
cgcacgtacctcggccacaagcaggctgtacgggatatcaacttcaacaacagtggcaca
gagttcctcagctgtgcctacgacagatactgcaaactctgggacactgaaactggcgag
tgtaaggcacggtttacaagtcggaaagtggcgtattgtgtgaaatttcacccagaggag
gacaaacaacacttgtttgtggctggtacctcagacaagaaaatagtctgttgggacacc
cggtccggtgagatcgtgcaggaatatgacagacatctaggggctgtgaacacgatcaca
tttgtggaccagaatcgcagatttgtctccacatcagatgataagagcttaagagtgtgg
gaatgggacattccggtggatttcaagtacatagccgacccttccatgcactcaatgccc
gccactgtgttgtcgcccaatggtaaatggctagcgtgccagtcgatggacaacaaggtc
actgtgttcaacgttctcaacagatttaagtacatgaggaagaaaacattcaccggacat
atggtggctggttatgcatgttgtctagatttctctccagaaatgacctacctgatatcg
ggtgatgccgatggaaagctgtacatttgggactggaagacaacgaagctctactccaag
ttcaaggcgcacgacgatgtgtgtatcgcagccatatggcatccacacgagacctcaaag
gtcgccactgctggctgggatggcgtcattaagtactgggactga

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