Mya arenaria (softshell): 128236592
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Entry
128236592 CDS
T09995
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC2-like
KO
K03021
DNA-directed RNA polymerase III subunit RPC2 [EC:
2.7.7.6
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
128236592
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128236592
Enzymes [BR:
maea01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
128236592
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
128236592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
128236592
NCBI-ProteinID:
XP_052807521
LinkDB
All DBs
Position
6:complement(24036496..24066424)
Genome browser
AA seq
1132 aa
AA seq
DB search
MGDMTNIDKEDLTAPVKNIEDKWKLLPAFLKVKGLVKQHIDSFNYFINVDIKEIMKANDK
ITSDADPNFYMKYLNIYVGMPDVEEGFNITKPISPHECRLRDMTYSAPITVDIEYTRGNQ
RIVRNNLPVGRMPIMLRSSNCVLNGKSPAEMAKLNECPMDPGGYFIVKGTEKVCLIQEQL
SKNRMIVDTDVGRKGTVVCSVTSSTHERKTKTDVIVKHEKYYIKQNSFTEDIPIAILFKG
MGFECEQEFVQMIGSEEEVLAMIGPCLEECHRAGVFTQLQALKYIGTRIRQRRMWGGPKK
TKIDEARDVLYGVILSHIPVVDWNFKMKAVYLALMVRRVIQAQLGIVKADDRDYYGNKRL
ELAGSLVSLLFEDLFKKFNSELKRIADITIPKPRAAQFDIVKHMRQDQITNGLVNSISTG
NWTIKRFKMDRSGVTQVLSRLSYISALGMMTRVSSQFEKTRKVSGPRSLQPSQWGMLCPS
DTPEGEACGLVKNLALMTHITTDHEEAPIVRLAFNLGVEDIQLLSGAEITSKHVFTVFLN
GNILGVISNYKKLVRTFRLMRRAGYINEFVSICPNHTHRCVYISSDAGRVCRPYIIVQKC
KPLVTNKHIEELNQGFRCFEDFLKEGLVEYLDVNEENDCMISLYEKEINPSTTHLEIEPF
TILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGTIGYNQRNRIDTLMYLLCYPQAPLVKS
KTIELINFDKLPAGQNATVAVMSYSGYDIEDALVINKASLDRGFGRCLVYRKQNATLRRY
ANQTFDKVMGPMVDANTRKPIWRHSALDSDGICAPGEKIENKQVFINKWMPTMTNSPLTS
DDPEKQTDYREVPIAYKGPVPSYIEKVMITSNTEEPFLVKMLLRQTRRPEIGDKFSSRHG
QKGVCGLIVPQADMPFSDLGICPDIIMNPHGYPSRMTVGKLMELLGSKAGVLDGKFHYGT
AFGGDKVVDLSADLIRHGFNYLGKDYVTSGITGEPLSAYIYFGPIYYQKLKHMVLDKMHA
RAKGPRAVLTRQPTEGRSRDGGLRLGEMERDCLIGYGASMLLLERLMISSDAFEVDVCEQ
CGLLGYLGWCQYCKSSKNVSTLKMPYACKLLFQELLSMNIVPRLSLKRYNEV
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgggtgacatgacaaatatcgataaggaggatttgactgcacctgtaaagaatatagag
gacaaatggaagctcctgccggctttcctgaaggtgaagggactggtgaagcagcacata
gattccttcaactacttcatcaatgtcgatataaaagagattatgaaagccaatgacaag
atcaccagtgatgcagacccaaacttttatatgaagtacttgaacatctatgtcggtatg
ccggacgttgaggaaggcttcaacataaccaagcctatttccccacatgagtgccggttg
agagacatgacatattcagccccgataactgtggacatagaatacacgaggggcaatcag
cgcattgtcaggaataaccttcctgttggaagaatgccgattatgttgcggagctctaac
tgcgttctcaacggaaaaagcccagcagagatggccaagctgaatgagtgccccatggac
ccaggtggctacttcattgtcaagggtacggaaaaggtctgtcttattcaagagcagctc
tccaagaacagaatgattgttgacacggatgttggtcgcaagggaacagttgtctgctcc
gtcacaagttccacacatgagaggaaaaccaaaacagatgtaattgtgaaacatgaaaag
tactacatcaaacaaaactcattcacagaggacattccgatagcaatcctgttcaagggc
atggggtttgagtgtgaacaagagtttgtgcagatgatcggcagtgaggaggaggtactg
gctatgattggtccatgcttagaggagtgtcaccgtgccggggtctttacacagctacag
gccctgaagtatattggcacaaggatacgccagcgtagaatgtggggtggcccaaaaaag
acgaaaatagatgaggctcgggatgtactttatggcgttattctctcacatataccggtt
gtggactggaacttcaagatgaaggcagtgtacctggctttaatggttcgtcgggtcatc
caagcccaacttggcatcgtcaaggccgacgacagagactactacggtaacaagagactg
gagctggctggatcactcgtctcacttctgtttgaagacttgttcaagaaattcaacagt
gagttgaagaggattgctgatataaccatacccaagccgcgggcagcgcagtttgacatt
gtgaagcatatgcgccaggaccagatcaccaatgggctggtgaactctatatctacaggc
aactggacaatcaagcgtttcaagatggaccgctctggtgtgacccaggtgctgtcgcgc
ctctcttacatctccgctcttggcatgatgacacgtgtttcctcacagtttgagaagacg
aggaaagtgagcggtcctcgttccctgcagccatcacagtggggcatgttgtgtccgtca
gatactccagagggggaggcttgcgggctggttaagaacctggcattgatgactcacata
acgacagaccatgaagaggccccgattgtccgtctggcatttaaccttggagtagaagat
atacagctactcagtggggcagagatcacaagcaaacatgtcttcacagtcttcctcaat
ggtaacattcttggtgtaataagcaactacaagaagctagtacgcacattccgactgatg
cgaagggcagggtacatcaacgaatttgtctccatctgcccgaaccacacccatagatgt
gtctacatctcctcagatgctggtagagtctgcagaccctacatcatagtacagaagtgt
aagccacttgtcaccaacaaacacatagaggagttaaaccaggggttccgctgttttgag
gactttcttaaggagggactggtggagtacctcgacgtaaacgaggaaaatgactgcatg
atttctctatatgagaaggaaatcaacccgtccacaactcaccttgagattgagccgttc
acaattctgggtgtgtgcgcgggtctcatcccttacccccaccataaccagtcccccagg
aacacctaccagtgtgctatgggcaagcaggccatgggcacgatagggtacaaccagagg
aacagaatcgatacactcatgtatctgctgtgttacccacaggctccactagtcaagtca
aagactatagagttgatcaactttgacaagttgccagccggccaaaatgctactgtagct
gtgatgtcgtatagtggttatgacattgaggatgctctggtcatcaacaaggcttccctt
gacagaggttttggtcgctgcctagtgtacagaaaacagaatgccacgttacgtcgctat
gccaaccagacgtttgacaaggtgatgggtcctatggtggatgccaacacgcgcaaacca
atatggcggcactcggcactagactctgatggcatatgtgcaccaggtgaaaagatagag
aacaagcaggtgtttatcaacaagtggatgccaacaatgaccaacagccccctgacatcc
gacgatccagagaaacagacagactatagggaggtccccatagcgtacaagggtcctgtg
ccttcttacatagagaaggttatgatcacgtcaaacacagaggagccgtttctagtcaag
atgttgctgaggcagacacgtcggccagagattggtgacaagttcagtagcagacatgga
cagaaaggtgtttgtggactcattgtcccacaggcagacatgcccttcagtgaccttggc
atttgtccagacattataatgaacccccatgggtacccctcacgtatgacggtgggtaaa
ctgatggagttgctgggcagcaaggccggggtcctggacggcaagttccattatggcaca
gcctttggtggtgacaaagtggtcgacctgtctgcagatctgattcgacatggcttcaac
tatctaggaaaggattatgtaacatctggtatcactggtgagccactgtcagcgtatatc
tactttggcccaatctactaccagaaactaaaacacatggtgctggacaagatgcatgca
cgtgccaagggtccgcgtgcagtactcaccagacagccaacggagggccgctcgagggat
gggggtctcaggcttggtgaaatggaacgtgattgtctgataggatatggggccagtatg
ttactgctagagcgattaatgatctccagtgatgcattcgaggttgatgtctgtgagcag
tgtggcctgctaggataccttggctggtgtcagtactgtaaatcttcaaagaatgtatca
accctgaagatgccatacgcctgcaaactgttgttccaggaactactttctatgaatatt
gtgcccagactgtcacttaagcgttacaatgaagtctag
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