Mya arenaria (softshell): 128236593
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Entry
128236593 CDS
T09995
Name
(RefSeq) WD repeat-containing protein 3-like
KO
K14556
U3 small nucleolar RNA-associated protein 12
Organism
maea
Mya arenaria (softshell)
Pathway
maea03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
128236593
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maea03009
]
128236593
Ribosome biogenesis [BR:
maea03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
128236593
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_2nd
Beta-prop_WDR3_1st
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Utp12
Beta-prop_CAF1B_HIR1
DSE1_N
NBCH_WD40
Beta-prop_NOL10_N
WDR90_beta-prop_4th
Beta-prop_WDR41
ANAPC4_WD40
Beta-prop_IFT140_1st
Beta-prop_VPS8
Beta-prop_WDR75_1st
ASA1
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_Aladin
Beta-prop_SPT8
CFAP251_N
Beta-prop_HPS5
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
WDR54
Beta-prop_ACSF4
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_WDR75_2nd
Beta-prop_EIPR1
Beta-prop_LRRK2
WD40_like
PAC11
TRM82_WD
Beta-prop_NUP159_NUP214
Beta-prop_RIG_1st
PROPPIN
Beta-prop_DCAF12
KNTC1_N
WD40_RFWD3
B-prop_COPA_B_2nd
Motif
Other DBs
NCBI-GeneID:
128236593
NCBI-ProteinID:
XP_052807522
LinkDB
All DBs
Position
6:complement(24088309..24117050)
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AA seq
927 aa
AA seq
DB search
MGLTKQYLRYAASDVFGLIGTNKANVVYLGLNGTQGRYCATGACENVIVWDIRTGEKHIT
LKGDKHEVTKIAASPDNLHISVGYSDGKIVVFNLQSGEVIITFSGHKSAVTALSYDHGGL
RLVSGGKDTDVIVWDIVNESGLYRLRGHKGAVTQAAFFKERNILVSSSKDTFVKFWDLDT
QHCFQTLVEHRSEVYDFVLLRDDCRLVTGSADSELRVWDLTHSSEQTEGEPAAKKSRLDK
DTEEEEEDGDLDLVRCVKVGSVFRAGRDRLVSMATDSMQSSLICHGSDRQLEVFTLPGEA
NLKKRLTKRQKKERKKAGLAADAEVAVELKLEDEICKHSAIKMPGKLVSAHTVNSDKTGI
KVVCLFTNNTLGYFSLDVGSQKGESPTIGVISHLAHQSDVRTLAFSSDNTALLSASSESV
KIWNRASLQCIRTMSCDYALCSVFAPGDRHVILGTKSGKLQIFDIGSGTLLEEREAHAGS
VWSICMSPDKRGLISGGADKQVKFWNFELVADEQNPNASKQLTLEHVRTLAMDDDVLCVR
CSPDQRLLAISLLDNTIKVFFLDTLKFFLSMYGHKLPVLCMDISADSTLLVSGSADRNIK
IWGLDFGDCHKSIFAHDDSVMCLQFIARTHMFFSGGKDKKIKQWDADKFEHITTLDTHHG
EVWSLAVSVSGNILATASHDKSLRLWQKTHEPLILQEEREMEREREFEESVGQDGEAVVP
GETNTETGLAGKKSMETVKAAERIMEAIELYKEEKYKWSIYRLESQQAHKKTQEPEPHPM
MLAFNVSTPEKYVQMVVRKVKSSELEEALLVLPFSYVIDLLKLLDEFISAGWEVELNCRC
LFFMLRVHHGQITSCTELVPVVDHLRKATKEKVQGLMDRVGFNVAGLKFIQGQLEESEET
VFFADATKRFQEKKKKSRKKAILAVKT
NT seq
2784 nt
NT seq
+upstream
nt +downstream
nt
atgggcttgacgaagcagtatcttcgctatgcggccagtgatgtatttggcctcattggc
acaaacaaagccaacgttgtgtatctaggactgaatggcactcagggtagatactgtgca
actggggcttgtgagaatgtcatcgtgtgggacatcagaacaggggaaaagcatatcaca
ttgaaaggtgacaagcatgaagtaacaaaaattgcagcctccccagacaatctgcacata
tctgtgggctacagtgatggaaaaatagttgtgtttaacctccagtcaggggaggtaatc
atcaccttcagtggtcacaagtcagcagtgactgccctttcatatgatcatggtggcctt
cgtcttgtttcaggagggaaagacacagatgttattgtgtgggacatagtgaatgagagt
ggattgtacagactaaggggccacaaaggggccgtaacccaggcggccttcttcaaggag
agaaacatactcgtctccagttccaaagatacgtttgtgaagttttgggacctggacaca
cagcactgcttccagacacttgtggaacacaggagtgaggtatatgactttgtcctgctt
cgagatgattgcaggctggtgacagggtctgcagacagtgagctacgagtctgggatcta
acacactcctctgagcagactgaaggcgaaccagctgctaaaaaatcacgacttgacaaa
gacacagaggaagaggaggaggatggtgaccttgaccttgtccgttgtgtcaaggtcggc
tctgtgttccgggcaggcagggacaggctggtatccatggcaacagatagcatgcagtca
tcactgatttgtcatggaagtgatcgtcagctggaggtgttcacactgcctggagaggcg
aacctgaagaaacgtctcacaaaacgacagaagaaagagaggaaaaaagcagggctggct
gctgatgctgaagttgcagtagagttgaaactggaggatgagatttgtaaacattcagcc
ataaagatgccgggcaaactggtgtccgcacatactgtcaactctgacaaaactgggatt
aaggtcgtctgcctcttcaccaacaacaccctcggttacttcagcctagatgtgggctcc
cagaagggtgagagccctacaattggggtgatcagccacttagcccaccagagtgatgtg
cggactctagccttcagctctgataacaccgccctattgtctgccagcagtgagtcagtc
aaaatctggaacagagcctccttacagtgtatcaggacaatgtcatgcgactacgcgctg
tgctcggtatttgctccgggagacagacatgtcatactgggaactaagagtggtaagctc
cagatatttgacattggcagtgggaccttactggaggagagggaagctcatgctggatct
gtctggtccatctgtatgtcaccggacaagcgaggcctgatttctggaggggcagacaag
caagtgaagttctggaactttgagctggtcgctgatgaacagaatcctaatgcaagcaag
cagttgactctggagcatgttcgtaccctggcgatggacgacgacgtgctgtgtgtacgc
tgctccccggaccagaggctgctagcaatctcactcctagataacaccatcaaagtcttt
ttccttgatacactcaagtttttcttgtcaatgtatggacacaagttgccagtgttgtgt
atggacatatcggcagacagcaccctgctggtttccgggtcagcggacagaaacatcaag
atctggggtctcgactttggcgactgtcacaaatctatcttcgctcatgatgacagtgtg
atgtgtcttcagtttatagccaggacccacatgttcttctctgggggcaaggataaaaag
atcaagcaatgggatgctgacaagtttgaacacataactacacttgatacccaccatggc
gaagtatggagcctggctgtcagtgtgagcgggaacatactggctactgcatcacatgac
aagtccctacgcctgtggcagaaaacacatgagcctctcatactacaggaggaacgagaa
atggagcgtgaacgggagtttgaagagtccgttggtcaggatggagaggctgtggtgcct
ggggagaccaacacagagacagggcttgctgggaagaagtcaatggagactgtcaaggct
gctgagaggatcatggaagctatagagctgtataaggaggagaaatacaagtggtccata
taccgcctcgaatcccagcaggctcacaagaagacgcaagagccagaaccgcacccaatg
atgttggcattcaatgtctccacaccagaaaaatatgtgcagatggtagtacgcaaagta
aaatcaagtgagctagaggaggctctactggttctcccattctcgtacgtgatagatctc
ctcaaactgctggacgagttcatctcagcaggctgggaagtggaactcaactgtagatgc
ctcttcttcatgctcagagttcatcatggccagataacatcctgtacagagctggtacct
gtagtagatcacctaaggaaagcaacaaaagaaaaagtgcaaggcctaatggacagagta
ggatttaacgttgcagggctgaagttcattcagggacagttggaagaatcagaagagacg
gtcttttttgctgatgctacaaagagatttcaggagaagaaaaagaaatcaaggaaaaag
gcgatactggctgttaagacttga
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