Mya arenaria (softshell): 128236670
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Entry
128236670 CDS
T09995
Name
(RefSeq) syntaxin-binding protein 5-like isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128236670
Membrane trafficking [BR:
maea04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
128236670
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
128236670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
Beta-prop_HPS5
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WD40
WD40_Prp19
Lgl_C
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Synaptobrevin
Beta-prop_NUP159_NUP214
PEP5_VPS11_N
Beta-prop_VPS8
WD40_RFWD3
WD40_like
MIOS_WD40
Motif
Other DBs
NCBI-GeneID:
128236670
NCBI-ProteinID:
XP_052807643
LinkDB
All DBs
Position
6:814545..895094
Genome browser
AA seq
1495 aa
AA seq
DB search
MAGKMAKKFNIRGMFDGLRQSVSSSSPKSESDIEETIRSEDIQVAKTVRHGFPYQPTAMA
FDSVQHILAIGTKSGSLRIFGQPGVDLHCHHGADVSVLQILFLVNEGALVTFCSDDNIHL
WNYRQKRPEIVHSLKFQRERITCCHLSFQSKWLYVGTDKGNVHVVNIESFSLSGYVIMWN
KAISLSRKTHPGPVLHLSDCPLDPSKLLIGFECGAIIFWDLKNKSADCRHQAAEPLRSIS
WHSEGKQFMSSHSDGSLLTWNVKTPGKPASIITPHAKPGKDGKTEQCKPITKVEWKSVRN
GLLRSFWHGLRSSDPLVIFSGGMSYDRAGRTPCITVMTGKTTTVLEMEHTVIDFVVMCET
PWQNDFQDPYAIVVLLQNDLVVIDLTSPGYPCFENPYPMDIHESPVTACQYFADCQTDLI
PALYSVGSSKQKRSGFSEKRWPIKGGEWGASTCSYPEIVVTGHADGTVKFWDASAVTLQV
LYKLKTAKLFEKPKNRVLEGQEDDPFAIYMIYLDQESRLLTLAGATHVMLFKFSKSEATL
EVPSLDVSIVYEVFDDLDSPELDYPKPSLGVASQHNHSGSMGSHSSNASDSAKQSKPSLS
VLSQQQKSGGSMGSYSSDGTRPEQTTALRVRPGSRKYPAGYHPDVVCLLTWTDNEHPGNV
TSICTNSNYGLLAFGNESGLAIVDIVQKSCLLNLGTPDLYGFKENHSHLLHHQHNNHNQH
PCVCSDEKPVGSMDPYQRAPRSPRGKKPQPTPLDGSNPALNEDGARSPTSDQPVSPDSLT
PQPPPRRRRPSKKLVCISENERNTLENQPLSAPILKGQSFQFSNEHEDNGQMLRKSTGSP
IEEVAPPDLNLIPPTPLVLRKENENREVHFQLKPTNQTVDQLKPVIPKKALACRTSSLPL
VPMPRDLVDEPITNKSKSQSHENFPTSQTDPCLTETEKTLPQRINSTDSDPEVKHHSHSR
HKYTIKSFKKRLKHGGKRREKSSERNHKTIETSDNDQGLDTEGSHDDLASHGSRSENEEY
PLTDEDVLSPSEESVFHEGKKDGFFRRMSVKMKMFVGKHEDEDLDHDSEKRLKRSDHCYL
IVTDLTDDTEGKPPVERKRSVQEMMPRTSNDKNDGSSFSRSRSSSMSSLENVSREAIQCL
VFTDSYTRKFDNFTSPCLWVGTSLGSVLVIVLNLPPSGDQRLTQPVIVSPSGTIFRLKGP
IQCMSFLDCNGVIIPTLTSGAWRDSARDEMKNSKLQSTPQKLKLSPSSSTEVTDRQFAII
CSEKQARVVSLPSQTCPYKARISENSFVVKADVVNLRGDSVCLACYVANGHIMVYSLPSL
KLLLDIDFLPLSDLRVARTFCFSNIGHAMYMCSPTELQKITYSAEFCDNLSEMLGELFLP
METPEPPKQGFFKNLFGGGPSMLDREELFGESSGKSARGLATRVPGSGGIQGLQSQTQAT
VAGEVSRARQLLSERGEKLSGVSERTEEMAMQAEAYSNTAHQIMLKYKDKKWYQF
NT seq
4488 nt
NT seq
+upstream
nt +downstream
nt
atggctggtaaaatggcaaaaaagtttaacattcgggggatgtttgacggtctccgacaa
tctgtcagcagctcatctccgaaatcagaatccgatatcgaagagacaattcggtctgag
gacattcaagtggcgaagactgtgcgtcatgggttcccatatcagccgacagcgatggcg
ttcgatagcgtacaacatattcttgccattggaaccaagtctggctccctcagaatattt
ggacagccaggtgtggacctccactgtcaccatggcgctgatgtctctgtcctccagatt
ctattccttgtgaatgagggagcactggtcacattctgttcggatgacaacatacatctt
tggaactatcgacagaagcggccagaaattgtacattccttaaaattccaaagagaaagg
ataacatgctgtcacctgtcattccaaagcaagtggctgtacgtggggacggacaagggc
aatgtacatgtcgtcaatatcgagtcttttagtctctctggatatgtcatcatgtggaac
aaagccataagcctgtcaagaaaaacccatccaggcccggtgttacatttaagtgattgc
cctctggaccctagcaagttgctgatagggtttgagtgtggtgccatcatcttctgggac
ctgaagaacaagtcagcagattgtcgacatcaggccgcagagcccctgcggtcaatatcg
tggcacagtgagggcaaacagttcatgtccagccactccgacggcagtcttttaacctgg
aacgtgaaaacccccgggaaacccgccagtattatcacaccacatgctaaaccaggcaaa
gacgggaagaccgaacagtgtaaacctataaccaaagtggaatggaagtccgtcagaaat
ggtttgttgcggtccttctggcatggattgaggtcaagtgatccgctggtgatattctct
ggcgggatgtcatatgaccgtgcaggaaggaccccctgtatcactgtcatgacggggaaa
accacaaccgttcttgaaatggaacacaccgtcatagactttgttgtcatgtgtgaaact
ccctggcaaaatgatttccaagacccttatgcaatagtagtccttctgcagaatgacctt
gttgttattgatctcacttctccagggtacccatgttttgaaaatccgtaccccatggac
attcatgaatcccccgttaccgcgtgccaatactttgccgactgtcaaacggaccttata
cccgccctctactctgtcgggtcctcaaaacagaaacgctccggctttagtgaaaagcgc
tggcctataaagggaggcgagtggggcgcatcaacctgtagttatcctgaaatagttgtc
actggtcatgcagatgggacagtcaaattctgggatgcatctgcagtgactttacaagta
ttatacaagctgaagactgccaaactgtttgagaagcctaagaaccgagtgttagaggga
caggaggatgatccatttgccatctacatgatctacctggaccaggagagccgcctcctc
acccttgccggggccacacatgtcatgctatttaaattctccaagtccgaggccacgcta
gaggtcccgtctctggacgtgtcaatagtgtatgaggtgtttgacgacctggactctccg
gaactggattaccctaagccaagtctgggtgtggcctcccaacacaaccatagtgggtcc
atgggctcgcatagcagcaacgcctctgactctgccaagcaatcaaaacctagcttaagc
gtattatcgcaacaacaaaagtctggcggtagcatgggctcatattcgtctgatgggact
cgccctgagcagacgacagcattgcgtgtccggcctgggtcgcgtaaataccctgcaggc
taccatccagacgttgtgtgtcttcttacttggacagacaatgagcatcccggaaatgtg
accagcatctgcactaactcaaactacggcctgttagcgtttggtaatgagtctggcctt
gctattgtggatattgtacagaagtcctgcctgctcaacctagggactccagatttatat
gggttcaaggagaatcactctcaccttcttcatcaccaacacaacaaccacaaccaacat
ccctgtgtatgtagtgacgagaagcccgtgggttcgatggacccataccagcgggcccct
cgctccccccggggtaagaaaccccagcccacccctctggacggcagtaacccagctctc
aatgaagatggtgctagatcacccaccagtgatcaacctgtgtcccctgatagtttaaca
ccacagccccctccccgtagacggcgacctagtaaaaaactggtgtgtatcagtgaaaac
gagcgtaatactctagaaaaccagcctctatcagcccccattctaaagggacagtctttt
cagttcagcaatgaacatgaggacaatggacaaatgttaagaaagagtacaggctcaccc
atcgaggaggtggctcccccggacctcaaccttataccccctacccctctcgttctgagg
aaggagaatgagaacagggaagtccattttcagttaaaaccaacaaaccagactgtagat
cagctaaagcctgtgatccctaaaaaggccctggcttgtaggacatcctctttacctttg
gtaccgatgccgcgagatcttgttgatgaaccaataacaaacaagagcaaatctcagtcg
catgaaaactttcccacaagtcaaactgatccatgcttaactgaaactgagaaaacctta
cctcagagaataaactcaacagattctgaccccgaggtgaagcaccattcacacagtaga
cacaaatacactattaagagtttcaaaaagaggttaaaacatggcggtaagagaagagag
aaaagttcagagagaaaccataagactatagaaacgagtgataatgaccaaggcttagat
actgaaggctcgcatgatgacctagccagtcacgggagcaggtcagagaatgaagaatac
cctctcacagatgaggatgtactcagcccctctgaagaatctgtattccatgaagggaag
aaggacggattttttaggcgaatgagtgtgaaaatgaaaatgtttgttggaaagcatgaa
gacgaggacctagaccatgactcagagaagaggttgaagcgtagcgaccattgctacctc
attgttactgaccttacagatgacacggaggggaagccgccagttgaaaggaagagatca
gtccaggaaatgatgccccgtacctctaatgataagaatgatggctcgtcattttcgcga
tctcgcagttctagcatgtcgagtctggaaaacgtctcaagggaggcaatccagtgcctc
gtcttcacagactcatacacccgcaaatttgataatttcacgagtccgtgtttgtgggtt
gggaccagtctgggctcagtccttgttatagtactaaacctgccgccatctggggaccag
cggttaacacaaccagtcattgtctcccccagtggaactatattccgtctgaaggggccg
atccagtgcatgtctttccttgactgtaatggggtgatcattcccacactgacgtcgggg
gcgtggagagactcggccagagatgaaatgaagaactcaaaactacaatccacacctcag
aagcttaagctatcacccagttcctctacagaagtgactgatagacagtttgccattata
tgttcagaaaaacaagccagagtggtatcattgccatctcaaacatgtccttacaaggcg
agaatttcagaaaactcatttgtggtgaaagccgatgtcgtcaatctcaggggtgacagt
gtgtgtctggcgtgctatgtggccaatggacacataatggtctacagtctaccaagtctc
aaactgctgctcgatatagacttcttgccactttctgatctcagagttgcaagaaccttc
tgctttagtaacattggccatgcaatgtatatgtgttcaccaacagaattacaaaagatt
acatactctgctgaattttgtgataatctcagtgagatgctaggggagctgttcctaccc
atggaaactccagagcccccgaaacagggcttcttcaaaaacctgtttggaggaggccca
tctatgctcgatagggaagaactatttggagaatctagcggtaagagtgctcgtggcctg
gctacacgggtgccagggtctggaggcatacaaggactccagtcacagacacaagctaca
gtggctggagaggtctcacgtgcacgacagttattgtccgagcgaggtgagaagctatca
ggcgtgagtgagcgtacggaggagatggcaatgcaggcagaggcgtactccaacactgcc
catcagatcatgttaaagtacaaagacaagaagtggtaccagttttag
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integrated database retrieval system
