Mya arenaria (softshell): 128237023
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Entry
128237023 CDS
T09995
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
maea04054
]
128237023
Pattern recognition receptors [BR:
maea04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128237023
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GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_5
LRR_14
LRR_9
DHU1_N
SmpB
Motif
Other DBs
NCBI-GeneID:
128237023
NCBI-ProteinID:
XP_052808158
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All DBs
Position
6:3827109..3837309
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AA seq
916 aa
AA seq
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MQKMRTENGILWCIRAVFVIHSFQMSSSSLGNSAAFQIENPAILDYENRASDWHEARHLP
FRPNEWFKIFTRNKTMGNRTDTKVSDMVYCQLCACYNASDGMHVDCSFRGISRAFNGISK
DAVEVSYRGNSLVDVKDTDFTGLQHLHQLDLSQNVIFNIEEGAFDDLKNLVVLLLNNNGF
VTFTDPLVPVNSFASLQNLRLLTLHGNIVYHLLNVSRIDSKLFRSLYRLEYLTIDGLMYI
EFDENYRHTNMSTLVMSSMIGHCGIVSLSNKTFRGLPKLRQLTMTGCEISQITENIFSSV
PLLAYLDISNNFKLGLYNAIGPLAKSLNLFNIKTLKMNFLSTPADVGTKLTKENLKYVNA
MSLVHLEVDSNNIEIFENSALNMSRGTLRTLSMQNNKLLFSLSVASIIWDNPSLVEVDLR
DQFKYKIPATNTLYTKLTPSRDQFNNKFLTLDVTNTLYNRPLLSRDQEYVVSLKKFSFTG
SRYLFEPLDFYNTSNSLWYMDISENRIARLKKYHFENLNHLTLLNLSNNYIEKVDSNSFE
DLVALKNLSLQNNLLGFEMGFGNLDKIFKPLLRLEHLILARNRIYAIKKDMFSSCKQLQF
LDLSDNYLNNLDIDVSQLQNLYLLNLRTNRIQSFPLAVQKGLETITNHSSLTVNLMDNKL
VCSCGNLNFLKWILSSNITFIKRASYKCTFMNSTSVFIRSENISTLEMECHRYLTVIMTC
TALASLFLATITAAIGYRYRWHILYWYYMAKLKDRTQGEQQNIYERLFEWDAYISYDDED
LHFVAAKMQPELEERLHYKLHIRERDFVLGETNSLNILNAVQQSKRTLLIISRHFLKNKW
CNFEINMATIEGIKSERGVVILVFLEKIPAVFMPKDLAALLTQCPVVDWPQCEDVAEAFW
TKLVNNIDDYNDISEN
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaaatgcggacagaaaatggtatactatggtgcattcgtgcagttttcgtcata
cattcattccaaatgtcgtcttcttcattggggaattcggcagcttttcaaatcgaaaac
ccagcaatactggattacgagaatagggccagtgactggcatgaagcaagacaccttccg
ttcaggcctaatgaatggtttaagatcttcacaagaaacaaaacaatggggaaccgtact
gatacgaaggtgtctgacatggtttactgtcagctatgcgcatgctataacgccagtgat
gggatgcatgtggactgttccttccggggaatatcaagggcttttaatggtatttctaaa
gacgctgttgaagtgtcatatcgaggtaatagtttagtcgacgttaaggacacagacttc
acaggacttcaacatcttcatcagcttgatctgtctcaaaatgtcatatttaatattgag
gagggtgcatttgatgacctgaagaatctggttgttctccttttaaacaataacggcttt
gtgacatttacagaccctttagttcctgtgaacagttttgcatctttacaaaacctgcgc
ttgttgactttacatggcaatatagtttatcatcttcttaacgtatccaggatagatagc
aaactgttccgttctctttaccgcttggaatacctgaccatagatggcttaatgtacata
gaattcgatgagaactatcggcatacaaatatgtcaacattggtgatgtcttcaatgatc
ggacattgtggaatagtgtcgctttcgaataagacttttcgaggccttccaaaactaagg
caacttacaatgactggatgcgaaatatcacagattacagaaaatatcttctcatcagtg
cctttgctggcatatttagatatttcaaataactttaagttgggtttatacaacgctatc
ggccctttggcgaagagtttaaatcttttcaacattaaaaccctgaaaatgaattttctt
tctactcccgctgacgttggcacaaaacttaccaaagaaaacctgaaatacgttaatgcg
atgtcactagttcatttagaagtggattccaataatatagaaatatttgaaaatagcgcg
ttgaatatgtcacgtggtacactaagaacactatcaatgcaaaacaacaaacttttattt
tcgttatctgtggcatcaatcatttgggataatccaagtttagttgaagttgaccttcgc
gaccagttcaaatacaagatccccgctaccaataccctgtacactaaacttacgccatca
cgtgaccagttcaataacaagttcctaactctcgacgtcaccaataccttgtacaataga
cctttgttatcacgtgaccaggaatacgtggtgagtctcaaaaagttctcattcacagga
agtcgttatttgttcgagccccttgatttttataacacgagcaactccctctggtatatg
gatatttcggaaaatcgcatcgcccggctgaagaagtatcatttcgaaaacctgaaccat
cttaccttattaaatctttcaaataattatatagaaaaggtcgactcaaactcctttgaa
gacttggttgcattaaagaatttatctcttcaaaacaatcttcttgggttcgaaatgggt
ttcggaaatttggataagatatttaaaccgcttctccgccttgaacacctaattcttgcc
cgtaacagaatctacgcaataaaaaaagacatgttttcctcttgcaagcagttgcaattt
ctagatttgtctgacaattacctgaataatcttgacatagatgtaagccaattacaaaat
ctgtatttattgaatcttcgaacaaaccgcattcaaagttttcctctcgcagtgcaaaaa
gggctggaaacaataaccaatcactcttcgctgactgtaaacctcatggacaacaaactt
gtgtgtagttgtggaaatctaaactttctcaaatggattctgagttcaaacataacattc
ataaaaagggcaagttacaaatgtacatttatgaatagcaccagcgtatttatacggtca
gaaaatatttccaccctggaaatggaatgccaccgatacctgaccgtgatcatgacgtgt
acagcattagcctccctcttcctggcgaccattacagctgctattggataccgataccgt
tggcatattctttactggtactatatggcgaaacttaaagacaggacacaaggtgaacaa
cagaacatatacgaacggctttttgaatgggatgcatatatatcgtatgatgatgaagac
ttgcatttcgttgcagcgaaaatgcaaccagaacttgaggaacgccttcattataagcta
cacattcgagagagggactttgtccttggtgaaaccaactccttgaacatactcaatgca
gtacagcaaagcaaacgaacacttctcatcataagcagacacttcttgaaaaacaagtgg
tgcaatttcgaaataaacatggccacgattgaaggcattaaaagtgaaaggggcgtggtg
atacttgtgttccttgagaagataccggcggtgttcatgccgaaagatcttgcggcgctc
ctcacacagtgtcccgtggttgattggccgcagtgcgaggacgtggcagaagctttctgg
accaagctggtcaataacattgacgattacaatgacattagcgaaaactga
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