Mya arenaria (softshell): 128237222
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Entry
128237222 CDS
T09995
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1-like isoform X1
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
maea
Mya arenaria (softshell)
Pathway
maea04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128237222
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
maea02000
]
128237222
Transporters [BR:
maea02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128237222
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GFIT
Motif
Pfam:
SNF
Phage_holin_3_3
Motif
Other DBs
NCBI-GeneID:
128237222
NCBI-ProteinID:
XP_052808526
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Position
6:24302052..24341007
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AA seq
670 aa
AA seq
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MDQKPENGALVWDEKSDEDREHDREESLETSTSTGSEESLERGTWGHPFEFILAIVGYSV
AFGNLMRFPYLCMRNGGGAFLIPFFLFLISCAFPLYYLEVCLGQFSGSSPLFVWRLAPLL
RGIGLLMILISGIVSWYYNAILAWVLYYLFNSFRSTLPWSTCDNPWNTPACRPSDPDALR
KLEEQASMLLSLSGLQNGTALNTTLTSGYNGSLTSGYNGTSLLALGNESVSRNISSAKEF
WQNNVLVMSSGIEETGSVQWHLVLSLFGAWFLVFLCLIKGIKSVGKVVYVTALLPYVLLL
VFLVRGLTLPGAFLGIRYFVTPDFERLKDSQVWLEAAVQVFYSLGPTWGGVITMASFNKF
TNNGLRDSIIACLADGLTSFFAGFVVFSVIGYMAHTSGQPIDEVATAGPGMMFIAYPEAI
SQMPLPQLWAVLFFIMMITVGLDTQFGMFETLASGIVDAFPRTLRKRKTLVTAALCTVMF
LLGLVFTTRSGIYIYNLVDWYSSGYCMCLGAALELLAVGWYYGADRFSEDMRLMFGYGAP
VLLRVCWCIVAPLVLLVVFLMIAVGYKEVTYEHYRYPAYAVAIGNLLAVVPVMPIPICFV
YGWVTVKGSLSQRFAQLMKPLGWRPSDRKLWESYEQREVLPSEGPLDYARTCLVGRRRTD
YQLTAVEFRH
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggatcagaaacccgaaaatggagctctcgtctgggacgagaagtccgacgaggatcgc
gagcatgacagagaagagagtctcgagaccagcacgagcaccggaagtgaggaaagcctt
gagcgtgggacgtggggtcatccgttcgagtttattcttgccattgtcggatacagcgta
gcgttcgggaacctaatgcggtttccatatctgtgcatgagaaacggtggtggggcgttc
ctgattccgttcttcctgttcctgatatcatgcgcgttcccgctctactaccttgaggtg
tgtctcggtcagttctccggaagttcccccctcttcgtctggaggcttgcgccactcctc
agaggaatcggcttgttgatgatcctgatttccgggatagtgtcctggtactataatgcc
atcctcgcctgggtgctgtactacctctttaactccttccggtccacgctcccctggtcc
acgtgcgacaatccgtggaacacgcccgcctgccgcccctcggaccccgacgcactccgg
aagttggaggagcaagcgagcatgttgttaagcttgagcggtcttcagaacggaactgct
cttaatacaacattaacttccggttataacggatcattaacttccggttataacggaaca
agccttctggcgctcggcaacgagagtgtttcacgtaacatcagctctgcaaaggaattc
tggcagaacaatgtgctggtgatgtcgtccggtatcgaggagacgggcagcgtccagtgg
cacctcgtcctctccctgttcggcgcttggttcctcgtattcttgtgcctcatcaagggc
atcaaatccgttggcaaggttgtttacgtgacggccctgctaccatacgtgttactgctc
gtgttcctcgtgcgcggcctcacacttccgggcgccttcctcggaatccgctacttcgtc
accccagatttcgaaagacttaaagactcccaggtgtggttggaagcagccgtgcaggtt
ttttattcactggggccgacctggggcggagtgatcaccatggccagcttcaacaagttt
acaaacaatggcctgagggactccattatcgcgtgtctggcggacgggttaacaagcttt
tttgcgggctttgtggttttctccgtgattggttacatggcgcatacttccggtcaaccg
attgatgaggtcgcaactgccggtcctggtatgatgtttatcgcctacccggaggccata
tcccaaatgcccctcccccaactctgggctgtgctcttctttatcatgatgatcacggtc
gggcttgatacgcagttcggtatgttcgaaaccctggccagcggtatcgttgacgcgttc
ccaaggacgctaaggaagaggaaaactctggtgacagcggctctatgcacggtcatgttc
cttcttggactcgtctttacaacgaggtcgggtatctacatatataacctggtagactgg
tacagcagcggctactgtatgtgcctgggggcggcgctagaactgctggctgtcggctgg
tactatggtgctgaccggttcagcgaagacatgaggcttatgtttggatacggagcgccg
gtcctgctgcgggtctgctggtgtatcgtggcgccgctcgttctcctagtcgtcttcctc
atgatcgccgtcggctacaaggaagttacgtacgagcactatcgttacccggcgtatgcc
gtcgccatagggaacctgctggccgtggttcccgtcatgcctattccaatttgcttcgtg
tacggatgggtgacggtgaaagggtcattgtcgcagagattcgctcagctcatgaagcca
ttgggctggcgtcctagtgaccggaaattatgggagtcgtacgagcagcgagaggtcctg
ccgtccgaaggaccattagactacgcgcgcacatgtctggttgggcggcggcggacggac
taccagctgacggccgttgagttccgacattga
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