Mya arenaria (softshell): 128237254
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Entry
128237254 CDS
T09995
Name
(RefSeq) DNA helicase B-like isoform X1
KO
K15254
DNA helicase B [EC:
5.6.2.3
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maea03032
]
128237254
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
128237254
DNA replication proteins [BR:
maea03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
128237254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
Viral_helicase1
UvrD_C_2
NPHP3_N
AAA_16
AAA_11
NACHT
PhoH
ATPase_2
Motif
Other DBs
NCBI-GeneID:
128237254
NCBI-ProteinID:
XP_052808570
LinkDB
All DBs
Position
6:4961490..5002604
Genome browser
AA seq
1528 aa
AA seq
DB search
MEETYNPVAGIFRENTEKHENGEDSEDDDEGELQWLGYKDVQAMAGGHQLVPYSRTKRCK
GDLINVQTRRQTGVAGLFPLKDPWWQTVILRTKKNKQNVTEPKDWNAVCYKLRDDPQRTE
ENHVQMLLTKLSAAYDMKNAKEESWITRKNNEFYDFLKERNQEACLELDNLEERLESFVS
WSHKQTKKSERPDDEEDPLQEGKKICDETSVFQNTVLHSDEMRCIMAARDFPQLLRYLPQ
LVPGFFLKVITMETKYLEKVNTLLEEHPGDMAFKELMKKHTGLLGFETSSEALVRSGLMG
KVPEEERGAIYMYEYIKRDTRENGHTCVLCEKMMDALGPTVRTLEESLEFLNGCKITKTV
VEGSRRLVYLMTLWKAEQKIAKGVDKLIRLNTEQPWELDVDFNSDEFESIRSDVDQLRAA
HLISSKPVVVISGKGGCGKTYVVTKVITSAQANRQAKGSFYEQAGNIGMDDETQDMTDSE
VTQGENEELSFRVGTCVDNSQGMGQDGDQDPGSGEDGVPEKVELLLTAPTGKAANLLGKR
AKHPSFTLHQVIFSFRNMEPGQPWRHAEVNTLVVDECSLVAVTTFAFLVELLQKNARLRR
VVLLGDVRQLPSIEPGNFLPDTFSSLDRIGCSVELRNNHRAESQLIVDNATLISKRQFPR
FEKEKFVFRSLPENQPAKSGNDYMSQDILVEVQSLLEHEALGDHTTSQFISFTRKVCEAI
NDICCSKYSKHRIRDSKGKIDLQIGDKICCTKNGYVARYEDEGGTMSCHTQSQFDKKEEE
DGGVQRFVSEDDPSDISTLPSQATPLHAKGHNSEQAPGKGDKSSKKRNEIRLCNGEIFFI
MDEKVIIKDRNEFQTYLELWDGDKTGGLRFWADKKELKAKCKIQHAWARTIHTFQGSETD
NVVYIVGSRTWRQNWQHVYTAVTRGRKTVFIVGQETNLRNAIKRQEIKRQTSLKKQIVDL
FHKNKDVKGTMAPGTPVKSQIPANQILPGRSHAFQIHPINNFVTEAGSPKLNDTQMMTNV
LTSLAHEHDEEDGLGEDIVEYDSDGSDSILTVIKPPQRPPASAQHKPSNKLSFNAQCDSV
KNSGKSFKQIKQINHSVIPAEIETDLIKHSDESDADSDDSVSILATPELKKGMKNVGKHS
GCENSHGNQVTLAQSPVTAKENVLSSESDETEEDIDADLFDSQSLISPHVKPNRTIISQR
LSLKRSCHSTRVKYTNKEQNVIDMFSLAQNEINVHSNSHSKQDKCTSADQTPSCQKQAIL
FKSLIPWSRDEEGRGKNATSSPLADNAHSNAQFQFTPGLSSTFSTLERFRTGGFAKHSKF
DRNIVSPIGRKQESPVLFESPPVLKTGRNSALFDIQDPKSNESMQSQWSDVDESDFLKFG
DESHIQSVSATGNELYLDVNNRKGESEASRTIANHLHKQQCTNTSQWSEVEDEQYMTLNL
EDIHHMTLPGSHCAAGEDVPLSPASNWTSRSSISPAHTSACTTPDTSSSTSRSLGSTPRK
RKHSGHDEVDAVSVSPLKRTLEQLSMSP
NT seq
4587 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaacgtacaatccggttgctggtattttccgtgaaaacactgaaaagcatgag
aatggggaggattctgaggatgatgatgaaggagagctacagtggcttggatacaaggat
gtgcaggccatggcagggggccaccagctagtgccttattcacgtacaaagaggtgcaag
ggggatttgataaatgttcagaccagacgtcagacaggagtggcaggtctctttcctctg
aaagatccatggtggcagacggtgattttgagaacaaagaaaaacaaacaaaatgtgacc
gaaccaaaggactggaatgctgtatgttataagcttagagacgacccacaaaggacagaa
gagaaccatgtacagatgctgcttacaaaactgtcagctgcgtatgatatgaagaatgca
aaggaagagtcatggattaccagaaagaataatgaattctatgattttctcaaggagagg
aaccaggaggcgtgtttggagctggataatctggaagaacgtctggaatcattcgtttca
tggtcacacaagcaaacgaagaagtcagagaggcctgatgatgaggaagacccgctccag
gaggggaagaaaatctgtgatgaaaccagtgtctttcaaaacactgtgttgcattctgac
gagatgcggtgtatcatggctgcgcgggattttccccagttgctacgctacctgcctcag
ctggtgccgggcttcttcctgaaggtcatcaccatggaaaccaagtacctggagaaggtc
aacacactcttggaggaacatccgggggacatggccttcaaggagctgatgaagaaacac
acaggtctgctggggtttgagacttcgagcgaggcccttgttaggagtgggctgatgggc
aaggttccagaggaggagcgaggggctatatacatgtatgagtacataaagcgtgacact
cgagagaacggccacacctgtgttctctgtgagaagatgatggatgcattaggtccaaca
gtacggaccctggaggaatccctggaatttctgaacgggtgtaagataaccaagactgta
gtggagggcagtcgacgtctcgtctacctgatgacgctgtggaaggctgaacagaagatc
gccaagggcgttgacaaactcattaggctgaacacagaacagccttgggagctggatgtt
gacttcaacagtgatgagtttgagagtatacgttctgatgtggaccagttaagagcggct
cacctcatttcctccaagccggttgttgtaatctcaggcaagggcgggtgtgggaaaaca
tacgttgtcacgaaagtgatcacttctgcacaggccaacagacaggcaaaaggaagtttt
tatgaacaagcaggcaatattgggatggatgatgaaacacaggacatgacagattctgaa
gttacccagggagagaatgaggaactcagcttcagggtggggacatgcgtagacaacagc
cagggaatggggcaggacggggaccaagaccctgggtctggggaggatggtgtgccagag
aaggtagagctcctgttgacagccccaacaggcaaggctgccaacctgctgggcaagcgg
gcaaaacatccctcctttacgctacatcaggtcatattcagcttcaggaacatggagcct
gggcagccatggcgacatgcagaagtgaacacactggttgtagatgaatgcagcctggta
gccgtgacaacatttgcctttctcgttgagcttttgcagaagaatgcgaggctgcggcgg
gtggtgttattaggcgatgtgagacagctaccctccatagaaccaggaaactttctaccc
gatacattctcctccctggataggattggctgctcagtagagcttcgcaacaatcaccgg
gccgagtcacagctgatagtggataacgccaccctgatatcaaagaggcagtttccaagg
tttgagaaggagaagttcgtattcagatcactccctgagaatcagccagccaagtcagga
aatgattacatgtcgcaggacatccttgttgaggtacagagccttctggagcacgaggca
ctcggggatcacaccacgtcacagttcatcagttttactagaaaagtttgtgaggccatc
aatgatatttgctgcagtaagtacagtaaacatcgtatccgggacagcaagggaaagatt
gacttgcagatcggggataaaatctgctgcactaagaatgggtatgtggcgcgttatgag
gacgagggtggaaccatgtcatgtcatacccaaagtcagtttgacaagaaggaggaagag
gatggcggagtgcagagatttgtgagtgaggatgacccctccgacatctccaccctaccc
tcacaggccacacccctccatgcaaagggtcacaactcagaacaggcgcctggcaaggga
gacaaatccagtaagaagaggaatgaaatcaggctgtgcaatggggagatattcttcatt
atggatgagaaggtgatcattaaagatcgaaatgagttccagacatacctggagttatgg
gacggagacaagacagggggtctgaggttctgggctgacaaaaaagagctgaaggccaag
tgtaagatacagcacgcctgggcaaggactatccacactttccagggctccgagacagac
aatgtggtgtatatagtcggcagtcgcacttggcgccagaactggcagcatgtgtacaca
gcagtcacacgtgggcggaagactgtgtttattgttgggcaggaaacaaacttgcgcaat
gccatcaagagacaggagatcaagagacagaccagcctcaagaaacagattgttgacctc
ttccataaaaacaaagatgtaaaaggtacaatggcaccaggaacacctgtgaagagccaa
atcccagccaatcaaattctaccaggaagatcacatgctttccagatacatccaatcaac
aactttgttactgaagccggtagccccaaattaaatgatacacagatgatgacaaatgtc
ctgacatcgttagcacacgaacatgatgaggaggatggtttgggagaggatattgtggaa
tatgatagtgatgggtctgacagcatcctcacagttataaaacctccacaaagaccacca
gcttcagcacaacataagcctagtaacaaactgtccttcaatgcccagtgtgacagtgta
aagaattcaggtaaaagctttaagcagataaagcaaataaatcattcagtgattcctgct
gaaattgaaactgatctcattaagcatagtgatgagtctgatgctgattcagatgattct
gtaagtattcttgctacaccagaactgaaaaagggcatgaaaaacgtggggaaacattca
gggtgtgaaaattcccatggtaaccaagtaacactggcacaatctcctgttacagccaag
gagaatgtattaagtagtgaatcggatgaaacagaagaagatattgatgcagatttattt
gattcacagagtctgatctctcctcatgtgaaaccaaacaggactattatatcacaacga
ctttcattaaaacgctcttgtcactctacaagagtcaaatatacaaacaaagaacaaaat
gtaattgacatgttcagtcttgcccaaaatgagataaatgtacattcaaatagtcactca
aaacaagacaagtgtacaagtgctgaccagacccctagctgccaaaagcaagccatcctc
ttcaaatcccttatcccctggtctcgtgatgaggaagggagaggtaaaaatgcaaccagt
tcccctctcgcagacaacgctcactcaaatgctcaattccaattcactcctggattaagt
agtactttctccactctcgaaagatttcggacaggaggttttgctaaacactccaaattt
gatagaaatattgtgtctccaataggtagaaaacaggagtcccctgtactatttgaatca
ccacctgttttaaaaactggaagaaatagtgctttgtttgatatacaggatcctaagagc
aatgagtctatgcaatcacaatggtcagatgtagatgaaagtgactttcttaagtttggt
gatgaaagtcacatacaaagtgtgtctgccactggtaatgaattgtacttggatgtgaat
aatagaaaaggtgagagtgaagcatcccgaacaattgccaatcatttacacaaacagcaa
tgcaccaacaccagtcagtggtcagaggttgaagatgaacaatacatgactttaaatcta
gaggacattcatcacatgaccttacctggtagccattgtgcagcaggtgaagatgttcca
ttatctccagctagtaactggacttctagaagtagcattagcccggcgcacacatctgcc
tgcactacgcctgacacatcgtcctctacttcaaggtcactaggttcaactccaaggaaa
cggaagcactctggtcatgatgaagttgatgctgttagtgtgtcaccgttgaaacgaaca
ttagaacagctcagcatgtcaccctga
DBGET
integrated database retrieval system
