Mya arenaria (softshell): 128237288
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Entry
128237288 CDS
T09995
Name
(RefSeq) LOW QUALITY PROTEIN: activating signal cointegrator 1 complex subunit 3-like
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maea03400
]
128237288
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128237288
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
128237288
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
Helicase_PWI
AAA_22
AAA_19
DNA_ligase_A_M
Motif
Other DBs
NCBI-GeneID:
128237288
NCBI-ProteinID:
XP_052808627
LinkDB
All DBs
Position
6:15253380..15389597
Genome browser
AA seq
2194 aa
AA seq
DB search
MSGLPRLSGALRVYTGLSTDTGSSHTHDSSELLRKRQLVTKKKTTVEGSSWQRVQEKIRA
ASSLGTEELTAAFKDLTQCARQIAGDGIDADVADGAAVYLLGVFKKTDKVGQKETGCLKS
VFGPFPASVATKACALVSKLTSSMPDEVVASLGTQEREEGDGAATVCEFGQGIKFSLPSV
VAKDTDLSSSDSEEEERREVNLQYTASETKPRSHATGGESMAPETERGLDAAWLQQEVGR
FYGTDGSTELGLSLEDLSSTIYDFLFSTKSDSELQNDLFELLGFDRFELIQSLLENRQKL
LYVATHEPEAHKLAARPKLEGSSKPAYGCQVVIQSEQERVMLKQLRREEKRQEKQRGGRG
EDGGESAGFNPADLRAHREAALQMAAVAPRFSGRAGTTGRERYPNVYDKMEEARLSSAFI
GGMKMALPDTLTRENNKIYEEVNIPPSDNAPTHVGENRVRIETLDEIAQMAFKNTKALNR
IQSVVFETAYKTNENLLICAPTGAGKTNIAMLTILHEIQQHLAQGVIKKDEFKIIYVAPM
KALAAEMVRNFGGRLEPLGISVRELTGDMSLTKSEILKTQMLVTTPEKWDVVTRKSTGDV
ALAQLVKLLIIDEVHLLHEDRGAVIECLVARTLRQVESSQSMIRIVGLSATLPNYLDVAR
FLHVNPYLGLFFFDGRFRPVPLGMAFIGIKALNRVQQMQDFNTVCYEKVLYQVKRGYQVM
VFVHARNETVRTASVLRDHAKNNGDIQLFLPQQCASLGDATKTVMKSRNKQLKELFSDGF
SIHHAGMLRQDRNVVERYFAAGHIKVLVCTATLAWGVNLPAHAVVIKGTQIYNAKKGAFV
DLGILDVMQIFGRAGRPQFDTFGHGTIITTHDKLSHYLSLMTRQNPIESQFINSLTDNLN
AEVALGTVTNVDEAVRWISYTYLYVRLTMNPLVNGVPYRSIEEDPTLNEYRRDLVIEAGR
KLDKARMVRFDEGTGYFYSTDQGRVSSHFYIKYDTVEVINEFLKTVMTEADIFALVSKAQ
EFDQIKVRDEEMEELEGLLHHECEMQVPGGVENSYGKVNILLQSYVSRHYLDSFSLVSDQ
SYVAQNAARITRSLFEICLKKGWPIMASRLLNLSKTIDKRIWGFETPLRQFSILTQEVIT
KIEGRKLKIDKLRDMDAKEIGHMLHHVKMGSVVKRCVHQLPSLDLDATIQPITRTVLRVR
LVITPSFNWDDKVHGSAAESFWIWVEDPENNHMYHSEYFLLHKKQMYQKDPSQVLVFTIP
IFEPLPTQYYVKAISDRWLGSESVCAISFQHLILPERHPPHTELLDLQPLPVTALMNPML
ETLYKFTHFNPIQTQLFHVLYHSDHNVLLGAPTGSGKTIAAELAIFRLFRERPKDKAVYI
APLKALVRERMEDWKVRIEQKLGKKVVELTGDVTPDMRAIARADLIVTTPEKWDGVSRSW
QTRSYVKAVSLIVIDEIHLLGNDRGPVLEVIVSRTNFISSHTERKVRVVGLSTALANARD
LADWLGIAQVGLYNFRPSVRPVPLEVHIAGFPGQHYCPRMATMNKPTFQAIKTHSPAKPV
LVFVSSRRQTRLTALDLIAFLAGEDNPKQWLHMDETEMENIISGVKDTNLKLILAFGIGI
HHAGLIERDRKITEELFVNTKIQVLIATSTLAWGVNFPAHLVVVKGTEYYDGKTRRYVDF
PITDVLQMMGRAGRPQFDDQGKAVILVHDIKKHFYKKFLYEPFPVESNLLEVLADHLNAE
IVAGTIGSKQDAMDYITWTYFFRRLLRNPSFYNLEDTDHSNLNRFLSSLVERALFELETS
YCLQLAEDGCTVEPQTLGRIASYYYLTHLTMRMFQSELGPQSTIPELIDVLTNASEYAEL
PVRHNEDQLNSELSKSVPLEVNPHTLDSPHTKANLLLQCHFGRLPLPSTDYNTDTKSVLD
QAIRICQAMLDVSADQGWLVTSLGIVTLVQMLVQGRWWTDNTLLTLPHLTPYHTHCFRSR
AKGALLETLPEVMETCEGRYPALADMLKGELDTNHIEQVYAVLCKLPQIEVTFTLQGYWE
GGDGCQEKRHIDTPLQGSRLQDQKWMSVHADQEYVLNVTLARINKNKKTDSKANAPRFPK
PKDEGWFLIVGDVQNRDLVALKRVPFVRGRSSVQVSVFTPETPGRVIYTVYLMSDSYLGL
DQQYDIHVDVTTPCIEAQVNTELAAELNDLDFDS
NT seq
6585 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggctgccacggctgtccggcgccctgcgggtgtatactgggctctccacagac
acaggatcctcacacacacatgacagtagtgaactacttaggaaaaggcagctggtcaca
aagaagaaaacaactgttgaaggttcaagctggcagagagtgcaggagaagatccgtgca
gcgagtagccttgggacggaggagctgaccgctgccttcaaggacctcactcagtgtgcc
aggcagatagctggtgatggcatagatgcagatgttgcggacggagcggccgtctatcta
cttggagtatttaagaaaacagacaaggtgggccagaaagagacaggctgtctgaagagc
gtgtttggcccattccctgcatcagtggcaacgaaagcatgtgcactggtgagcaagcta
acaagctctatgccggacgaggttgttgcctcacttgggactcaggagcgtgaggagggg
gatggggctgccactgtgtgtgagtttggtcagggaatcaagttctccctgccgtcagtg
gtggctaaggacactgatctgtccagttcagattcagaagaggaggagaggagggaagtt
aaccttcagtacacagccagcgaaaccaaacctcgcagccatgctacaggtggggaatca
atggcccccgaaacagagcgaggactagacgctgcctggctacaacaggaagtgggtcgg
ttttatgggacagacggctccacagagctgggtctttccctggaagacctttccagcacc
atctatgatttcctcttctccaccaagtcagattcagaactacaaaatgatctgtttgag
ttgctgggatttgataggtttgagctgattcagtccttgctggagaaccgtcagaaactg
ctgtatgtggctacacatgagcccgaggcccataaattagccgcaaggcctaagttggaa
ggatctagtaagccagcatacggctgtcaagttgtcattcagtcagagcaggagcgtgtc
atgttgaagcagctacgtcgggaggagaaacgccaggagaagcagcgtggtggacggggt
gaagatggtggggagtctgcaggcttcaaccccgctgacctgcgggcacatagggaggca
gccctgcagatggcggcagtggctccccggttctctgggcgcgcagggaccacaggaagg
gagaggtatccaaacgtatatgacaagatggaagaggcccgcctctcgtctgcatttatt
ggtggtatgaagatggcactgccagacacactgacacgtgaaaataacaagatatacgag
gaggtgaacatccctccaagcgacaatgcacccacccacgtcggcgaaaacagggtccgc
attgaaacattagatgagattgcgcagatggctttcaagaacacaaaggccctcaacagg
atacagtcggtggtgtttgagacggcgtacaagaccaacgaaaacctgctgatctgtgcg
ccaaccggggctggaaagactaacattgccatgctcaccattctgcatgagattcaacag
catctggcacagggcgtcatcaagaaggacgagttcaaaatcatctacgttgccccgatg
aaggcgctggccgctgagatggtgcgcaactttgggggacgcctagagccactgggtatt
tccgttcgggaactgacaggagacatgtcacttaccaagtcggagatactcaaaacgcag
atgttggtaacaacaccggagaagtgggatgtggtgacgcggaaaagcacgggagatgtg
gcgctggctcaactcgttaaactgctcattattgatgaggtgcacctgctacatgaggac
cgtggtgccgtcatagagtgcctcgtcgccaggacacttagacaggttgagtcttctcag
agtatgatccgtatagtggggctgtcagccaccctgccaaactatctggacgttgcccgc
ttcctacatgtcaacccctacctagggctcttcttctttgatggaaggttccggcctgtc
cctcttggcatggctttcataggtatcaaggcattgaatcgtgtacagcagatgcaggac
ttcaacacggtctgctatgaaaaggtcctgtaccaggtgaagcgtggctatcaagtgatg
gtgttcgttcatgcgagaaacgagactgtgcgcactgcctcagtcctccgtgaccatgcc
aagaacaatggagacatccaactcttcctgccccagcagtgtgcctccctcggggatgcc
accaagactgtgatgaagtcacgtaacaagcagctgaaggagctgttcagtgatgggttc
agcatccaccacgcaggtatgctgcgccaggaccgcaacgttgttgagcgctacttcgca
gctggccatatcaaggtccttgtgtgtactgccacactggcctggggtgttaacttgcca
gcacatgctgttgttatcaagggcacccagatatacaatgcaaagaagggcgcgtttgtg
gatctcggtatcctagacgttatgcagatatttgggcgtgctgggcgtccacagtttgac
acatttgggcatgggacaatcataactacccacgacaagctgtcgcactacctctctctc
atgacgagacagaaccccatagagagtcagttcatcaacagcctcactgacaacctgaat
gctgaagttgccctgggaacagtgactaatgttgatgaggctgtacgctggatcagttac
acatatttgtatgtacgcctgactatgaatccactggtaaacggtgtcccctaccgtagc
attgaggaggacccgacactcaatgagtaccgccgtgaccttgtgatagaggctggccgc
aagctggacaaagctcgcatggtacggttcgatgaggggacaggatacttctactctact
gaccagggacgagtctcctcacacttctatatcaaatatgatactgtcgaggtaatcaac
gagttcttgaagacggtgatgacggaggcagacatctttgctctcgtgtccaaggctcag
gaatttgaccagataaaggttcgtgatgaggagatggaggagctggaagggctcctacac
catgagtgtgagatgcaggtccccgggggtgtggagaactcatatggcaaggtgaacatc
ctcctccagtcgtacgtctcccgacactacctggacagcttctccctcgtctctgaccag
tcatatgttgctcagaatgcagcccgtatcacccggtcactgtttgagatttgcctgaag
aaaggctggcccatcatggccagtcggctgctcaacctcagtaagaccatcgacaagcgt
atctgggggtttgagacgccattgaggcagttttccatcctcactcaggaggtgatcacc
aagattgaaggacgcaaactcaagattgataaactcagagacatggatgctaaagaaata
ggtcacatgttacaccatgtgaagatggggagtgtggtaaagcgatgtgtgcaccagcta
ccttcactcgaccttgatgccaccatccagccaatcacacgcaccgtccttcgtgtacgc
ctcgtcatcacgccctcgttcaactgggatgataaggtgcacgggtctgcagctgagtcg
ttttggatctgggtggaagatccggagaacaaccacatgtaccactctgagtacttcctc
ctgcacaagaaacagatgtaccagaaggatcctagccaagtgcttgtgttcaccatccca
atcttcgagcctctaccaacccaatactatgtgaaggctatctccgaccgctggctgggc
tcggagtctgtctgtgccatatcgttccaacatctcatactaccggagcgccatccacct
cacacagagctgctggacctgcagccgttgccggtgacagcactgatgaaccctatgttg
gagacactttacaaatttacgcacttcaacccgatccagacacagcttttccacgtactc
taccactctgaccataatgtccttctcggtgccccaactggctcaggcaaaaccattgcc
gcagagctcgccatcttccgcttgttcagggaacgacccaaagataaggctgtctacatt
gccccgcttaaagccctggttagggaacgcatggaagattggaaagtccgcatcgaacag
aagcttggcaagaaggtggtggaattgacgggtgatgtcacgccagacatgcgggccatc
gccagggctgacctaatagtgacgaccccggagaagtgggacggtgtgtcgcgatcctgg
cagacgcgcagctatgtgaaggctgtctcccttatcgtcatagatgagatacatctccta
ggaaacgaccgtgggcctgtgctggaggtgatcgtgtcccgtaccaacttcatctcgtcc
cacactgagcggaaggtgcgggtggtcggcctctctactgccctcgccaacgcacgagac
cttgctgactggctgggcattgctcaggttggtttgtacaacttccgtccgtctgtgcgc
cccgtgccgctggaggtgcacattgcaggattccctggccaacattactgccctcgcatg
gcaaccatgaataagccaacattccaagccattaagacacactctcctgcaaagcctgtg
ctggtgtttgtgtcatcacggcgacagacacgcttgacggccctcgacctaatagcattc
ctggcaggagaggacaatcctaaacagtggctgcatatggatgagactgagatggagaat
atcatatccggggtcaaggacacaaaccttaagctgattcttgccttcggtattggcatc
caccatgctggtctcatagagcgagacaggaaaatcacagaggagctctttgtcaacacc
aaaattcaggtgttgatagccacgagtacgcttgcctggggggtgaacttccctgcccat
ctagttgttgtgaagggaaccgagtactacgatggcaagacacgcagatatgttgacttc
cccattacagacgtgctgcagatgatgggtcgtgcaggaaggccccagtttgacgaccag
ggcaaggctgtcattcttgtgcacgacatcaagaaacacttctacaagaagttcctctat
gagccctttcccgtcgagtccaatttgttggaggtgttagcggaccacttgaatgcagag
atcgtggcagggacaattggctccaagcaggatgccatggactacatcacatggacttac
ttcttccgcaggctccttagaaaccccagtttctacaacctagaggacacggaccactca
aacctgaaccgcttcctgtccagcctcgttgagcgcgcactgtttgagctggagacgtcc
tactgtttacagcttgccgaggatggttgcacggtggaaccacaaacactgggtcggatt
gcctcgtactactaccttacccatctcaccatgcgtatgttccagagcgaactagggcca
cagtctaccattccagaactcatagatgtcctcactaatgcctcagagtatgctgagtta
cctgttcgtcacaatgaggaccagctgaacagtgagttatcaaagagtgttccactggag
gtgaacccccacaccctggactccccacacaccaaggccaacctgctgttacagtgtcac
tttggtcgcctgcctctcccctctacagactacaacaccgacaccaagtctgttcttgac
caggccattagaatttgtcaggctatgttggatgtaagtgcggaccagggttggctggtg
acgtcgctggggatcgtgacactggtgcaaatgctggtgcagggccgctggtggactgac
aacacgctccttaccctgccccaccttacaccctaccacacccactgcttcaggtctcgt
gcgaaaggggcactgttagagacccttccagaagtaatggagacgtgtgagggtcggtac
cctgctctggctgacatgctgaagggggagctggacaccaaccacatagaacaggtgtat
gcagtactgtgtaagctgccccagatagaggtgaccttcaccttgcagggctactgggag
ggtggggacggctgccaggagaagaggcatatagacacgccactccaggggagccggctg
caggaccagaagtggatgagtgtccatgcagaccaggagtacgtcctcaacgtcacactt
gccaggatcaacaaaaataagaagactgacagtaaggctaacgccccacgattcccaaag
ccaaaagatgagggctggttcctcattgtgggagatgtccagaatagggatcttgttgcc
ctcaagagggttccatttgttaggggtcggtctagcgtccaggtgtccgtgttcacacca
gagacacccgggcgggtgatctacactgtgtacctgatgagtgactcttaccttggcctt
gatcagcaatatgacatacacgttgacgtgacaacgccctgcatcgaggcccaggtcaac
accgagttggcggcagagctgaacgaccttgattttgactcctga
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integrated database retrieval system
