Mya arenaria (softshell): 128237659
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Entry
128237659 CDS
T09995
Name
(RefSeq) uncharacterized protein LOC128237659
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128237659
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128237659
03400 DNA repair and recombination proteins [BR:
maea03400
]
128237659
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128237659
Messenger RNA biogenesis [BR:
maea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
128237659
DNA repair and recombination proteins [BR:
maea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
128237659
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
Motif
Other DBs
NCBI-GeneID:
128237659
NCBI-ProteinID:
XP_052809211
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All DBs
Position
6:26407952..26411707
Genome browser
AA seq
485 aa
AA seq
DB search
MAHLCKPQLGISRSSVLLGTLFKFCEIKYAFHVILKALKMDRYSVKELYKTIKHMFNFEL
KVEQELILKELMKNRDVTAILPTGYGKSLCYILPPLLSDVKSPDVQHVAVVVSPLISLMK
DQEQHLTQWGIKCCLSVDLGPKVKDQILDLATADVSIIFVTPEALQTSPWRKLFLDRRFQ
KRLTVLACDEAHCVSDWGEDFRPEFRMVAEIRSLCDAPLLAVTATATQAVQDGIVKYLHI
SENALSIGVVPDRPNIKLVVKAKATEHYEDELLWVLDGCKEGELIEKTLIFCRSYKSVYN
VWSFLVEGLQDHWWVDGERKVEMYHASTDDDSKKRILGEFSKPDGRVRVVVSTIAFGMGI
AIPNIRMVIHWGAPKSFLAYWQEIGRAGRDGKPALAVAILYPRSLCPRVCDNNLKEMFVS
EECIRRGVLLNLLTKDMDANKVPKASKCENKKCIQCICACCLCCSNCFSRCTCEGKETQT
LFKTN
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggctcatctctgcaaaccgcaacttggaataagtcgctcttcggtgcttttgggaacc
ttattcaagttctgtgaaattaaatacgcgttccatgtgattttaaaagctctcaaaatg
gaccgttattctgtcaaggaactgtacaagaccataaaacacatgtttaattttgaattg
aaagttgaacaagaattgatcttaaaagaattgatgaagaaccgggacgtaaccgccatt
ctgccaaccggatacggaaaatcgctatgctacattttgccaccattactaagcgatgtg
aaaagcccggacgtacaacatgttgctgttgtggtatctcctttgattagtttgatgaag
gaccaggagcaacaccttacacaatggggtataaagtgctgtctttcggtcgacctggga
ccaaaagtgaaagatcaaattttagatctagctacagcagatgtgtccatcatctttgtg
acgccagaggcgctccagacgtcgccttggaggaaattgttcctggatcgaagattccag
aagaggctaacagttctagcttgtgacgaagcgcactgtgtgtctgactggggtgaagat
tttcggccagaatttcgaatggtggctgagatcagaagtctttgcgatgcccccttgttg
gctgtcactgctacagcaacacaagcggtacaagatggcatcgtcaaataccttcacata
agcgaaaatgcattgtcaattggagtagttccggataggcctaatatcaagctggttgtg
aaggcgaaggccactgagcactatgaggatgaactcctgtgggtactcgacggatgcaag
gaaggggagttgatcgagaagaccttaatattttgcaggtcatacaagagtgtgtataat
gtatggtcatttctggtcgaggggctacaggaccattggtgggtggatggagagaggaag
gtagagatgtaccatgcgtcaacagatgacgattccaagaaacggattcttggggaattc
tctaaacccgatgggcgtgttcgagttgttgtaagcacgattgctttcgggatgggaatt
gctattcctaacattagaatggtcattcactggggagccccgaaaagctttctcgcctac
tggcaggaaatcggtagggcgggaagagatggcaaacctgctctggcagttgccatttta
tacccgcggtcgctctgcccgagagtatgtgacaataacctaaaagagatgttcgtgtca
gaagagtgtataagaagaggggtgcttctgaacctactaacgaaggacatggacgcaaac
aaagtcccaaaggcatccaaatgtgagaacaagaaatgcattcaatgcatatgtgcatgc
tgtttatgctgcagcaattgtttctcccgatgtacgtgtgagggtaaagaaacgcaaaca
ctattcaaaaccaattga
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