Mya arenaria (softshell): 128238125
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Entry
128238125 CDS
T09995
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
maea
Mya arenaria (softshell)
Pathway
maea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128238125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maea03400
]
128238125
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
128238125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
TPR_HPS5_insect
Motif
Other DBs
NCBI-GeneID:
128238125
NCBI-ProteinID:
XP_052809659
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All DBs
Position
6:complement(29811200..29843127)
Genome browser
AA seq
926 aa
AA seq
DB search
MALQPNQELKLDLPQEQGFLSYFRSLPEKSSTTLRFFDRTEYYSVHGQDAVFVAKEVFKT
TSVVKMLGSGERKVESVTLSRMNFESLVRDLLLVRQYRVEVYKNKGGAKNNDWSLGFKAS
PGNLTQFEDILFGSVDMANSVGVIGVKLAADKLVGVGYADATLRKFLVTEFTDNDQFSNL
EALLVQLGPKECLIASSDVSNDGGKLKEVLERSGVMITERKKSEFSSKDSVQDMNRLLKV
KKGEQANAAALAEIEKQQAMSALGAVVHYLELLSDDTNFGQYTLTTFDLGQYMRLDAAAV
RALNLLPNTLEGGNKNQSVLGLLNRCRTAQGQRLLGHWVKQPLVDINKIEERLNIVEALV
EDTELRQTLYEDQLRKIPDFQRLAKKFQRKKANLQDVYRVYQAIDKMPYLLETLERTDSQ
HKTLLMHVFSNPLKEMLMDFAKYQEMVEATMDLSQVENHEFVIKADFDEGLTALKERIDS
LEESIKGQMNKVSRDLGLEPNKVLKLESSAQLGYYFRVTLKEEKALRNNKNYITIDTKTN
GVRFHNKAMAEYNREYIGAKEEYGEQQKSVVAEVVNIASGYVEPMLLMNDILAQLDVLVS
FSQVSTCAPIPYIRPTVREKGSGVIRLTEARHPCLEMQDDIAFIPNDISFEEGKQMFHII
TGPNMGGKSTYIRSVGVVVLMAQLGCFVPCSEAEISIVDSILARVGAGDSQLKGVSTFMA
EMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEHIATKLKSFCLFATHFHEL
TSLADQVPTVNNLHVTALTTNDTLTLLYRVKPGVCDQSFGIHVAELAHFPKHVVEFAREK
ACELEDYQCVSLTGTDLEGDGEPAVKKRKLVKQEGEELISGFLSQVRALPMGSLSDQELE
EKVAALKADVLAKNNSYIADILARKA
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcagccgaatcaagaattaaagcttgacctgccacaggagcaaggctttttg
agttacttcaggtcactgccagagaaatcttcaacaactctacgtttctttgataggacg
gaatactacagcgtccatggtcaagatgctgtgtttgtggcaaaggaagtgtttaagact
acatccgtcgtcaaaatgctgggatccggtgaaagaaaggtggagagtgttacattgagt
cgtatgaatttcgagtccttagtgcgagacctgctcctggttcgtcagtaccgcgtcgag
gtgtacaagaacaagggaggggccaagaacaatgactggagtctgggcttcaaggcgtct
cctggcaaccttacccagtttgaggacattctattcgggagcgtagatatggccaactct
gtgggcgtcattggggtgaagctggcagctgacaagcttgtgggtgtcgggtatgctgat
gccaccctgaggaagtttctcgtcaccgagttcacagacaatgaccagttctcaaacctt
gaggcgttgttggtacagttgggaccaaaagagtgccttatagcatccagcgacgtgagt
aacgatggcgggaaactgaaagaagtgcttgaacgcagtggggtcatgatcacggagagg
aaaaaaagtgagttcagcagtaaggacagcgtacaggacatgaatcgactactcaaagtg
aagaaaggagaacaagcgaacgcagctgctcttgctgaaatagagaagcagcaggcaatg
tctgcgcttggggccgtcgtccactacttagagctcctctcagatgacacaaacttcggc
caatacacactcacaacctttgaccttggccagtacatgaggctggatgctgccgctgtc
cgggcactcaacctgttacccaatactctcgaaggagggaacaaaaaccagtctgtccta
ggattgctgaacaggtgtagaactgctcagggtcagaggttactggggcactgggtcaaa
cagcctctcgtggatatcaacaagattgaggagcgtttgaacattgttgaggccctggtc
gaggacactgagctacgacagacactttacgaggaccagttacgcaagattccagacttc
cagaggctggccaagaagtttcagagaaagaaggccaaccttcaggatgtgtaccgggtg
tatcaagccattgacaagatgccatacctgctggagactctggaacgcacagacagccaa
cataagacactgctcatgcatgtcttctcaaaccctctgaaggagatgttaatggacttt
gccaagtaccaggagatggttgaagccactatggacctgagccaggtggagaatcatgag
tttgtgatcaaagccgacttcgatgaaggcctcactgccctcaaagagcggatagactca
ctggaggagagtattaaaggacagatgaacaaggtgagtcgggaccttggattggaacct
aacaaagtcttaaagcttgaaagcagtgcacagctggggtactacttccgtgtgaccttg
aaagaggagaaagccctccgtaacaacaagaactacatcaccatagatacgaagaccaac
ggggtccgcttccataacaaggcgatggccgagtacaacagggagtatattggggcgaag
gaggagtatggtgaacagcagaagagtgttgtcgctgaagtcgtcaacattgcttcgggc
tatgtggagccgatgttactgatgaacgatattcttgcccagcttgacgtgcttgtcagt
ttttcccaagtgtccacgtgtgcgcccataccttacatacggccaacagtcagggagaag
ggtagtggggttatccgattgacggaggccagacatccctgcctggagatgcaggatgat
attgccttcattcctaatgacatctcttttgaagagggtaaacagatgttccacattata
accggaccaaatatgggaggaaaatctacatacatcagatctgtaggtgtggttgtattg
atggcccagctgggctgctttgtgccctgcagcgaggcagaaatctctatagtggacagt
atcctggcacgggtcggggctggtgacagtcagctgaaaggcgtgtcaacttttatggcc
gagatgctagaaactgcggccatactcaggtctgctactgaggattctctgatcattata
gatgagctaggcagaggaacctcaacatacgatggctttggcctcgcctgggcaatctca
gagcatatagcaacaaagctgaagtcattctgcctgtttgcgacccatttccacgagttg
acgtcattggctgaccaggtgccgacagtgaacaatctccatgtgactgctcttaccacc
aatgacacgctgacgttactgtacagggtcaaaccaggtgtgtgtgaccagagttttgga
atccatgttgcagaactagcccacttccctaaacatgtggtggagttcgctcgagagaag
gcatgtgagctggaggactatcagtgcgtcagtctcacgggaactgatctcgagggagac
ggggaaccagcagtgaagaaacgtaaacttgtcaaacaggagggtgaggagttgatttct
gggttcctgtctcaggtgcgggcactgcccatgggctcattgtcggaccaagaactggag
gagaaagtggcagcattgaaggctgacgtgctggcaaagaacaactcgtacatcgctgat
atactggccaggaaggcttga
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