Mya arenaria (softshell): 128238337
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Entry
128238337 CDS
T09995
Name
(RefSeq) CCR4-NOT transcription complex subunit 2-like isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
maea
Mya arenaria (softshell)
Pathway
maea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128238337
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128238337
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128238337
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
128238337
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
128238337
NCBI-ProteinID:
XP_052810127
LinkDB
All DBs
Position
6:40364957..40385173
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AA seq
648 aa
AA seq
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MMDTNTMVNMSMASSLASSLSNSSSMSGFPNSSLANSSSMSGFPNSSLANSSSMAGFPNS
SIANASSMSGFPSSILANSSSMTGFSNNTSMASDFTNMGNPGSTNSSAFGQKYTVDQMSW
NTQFGLSGRKGMGELSPGSRSKLSGLPSTSQTLPTQGQQAFNIQMPKHNRKSGGFFGEDD
DPETSMYMPSTIFRPDNKDGLTQSQSPSNPAVGFGNNFYSQGGLNSFPMPQRQGPISGSG
TQFQRNLTPTSLGNQSFTPGSGILQNSPNRGVITAIGQHRMINSASSQQAPISALQKRPI
GSGLQSSSGPISNLASSFGFPSRSESSQMNFDPAEFPSLGNQLPPQSSMSGGNPRNYVGM
VKTDRQDQTPEFQIVQEDFPALPGAQSTLSMFVSDPQTAGSTDPSKKQHQNLISGSSYEQ
ALNNKDKFPNDKQGSGPPKGVHIHADGRVTNIPQGMVADQFGMVGLLTFIRSAEMDNSLV
ALAPGMDLTTLGLNLNSPENLYSTFQSPWVDLPCRPQDIDFHVPWEYMTNIYIRDKLSPI
KLNRYGEDLLFFLFYMNGGDVLQLAAAAELYNRDWRYHKDERVWLTRPPGVEPIVNGGTY
ERGTYYFFDVQNWRKVPKEFHLEYEKLETRPTLPSRLYYNPNQPVDTH
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgatggatacaaacacgatggtgaatatgagcatggcctccagtctagcatccagtctc
tctaactcaagcagtatgtcgggattcccaaacagcagtcttgctaactcaagcagtatg
tcgggattcccaaacagcagtcttgctaactcgagcagtatggcgggattcccaaacagc
agtatcgctaatgcaagcagtatgtcgggattcccaagcagcattctcgcaaactccagc
agtatgacaggattctcaaacaacacaagcatggcgtcagatttcacaaatatgggaaat
ccgggctcaactaacagttctgcatttggacaaaaatacaccgttgatcaaatgtcttgg
aacacgcagttcggtctaagtggtcgtaaggggatgggagagctgtccccagggtcccgg
agcaagttgtcaggccttccaagcacaagtcagaccctccccacccagggacaacaagcc
tttaacatacagatgccaaaacacaatcgcaaatcaggcgggttttttggtgaggatgat
gatccggagacgagtatgtacatgccttcaaccatcttcagaccagataataaagacggt
ttgactcagtcccagtccccctccaacccggcagttggcttcggcaataacttctactca
caaggtgggttgaactcatttccaatgccccagcgacaaggcccgatatctgggtccggt
acccaatttcagcgcaatctcactcccactagtcttggtaaccaatcttttacgccgggc
tccggtattctccaaaattcacccaacagaggagtgataacagcgataggccaacatcga
atgatcaacagtgcgtccagccaacaggcaccaatatcagcccttcagaaacgacccatt
ggctcaggattacaaagttcatcaggccctatatcaaaccttgcatcgtcatttggtttc
ccgtcccggtcagaaagttcacagatgaactttgaccccgcagaattcccttcattaggc
aaccaactgccgccacagagctcaatgtctgggggtaaccccagaaactacgtaggcatg
gtgaagactgaccggcaagaccagactcccgagtttcaaattgtgcaggaggacttcccc
gcccttcccggagctcagagtacattatctatgtttgtgtctgatccacaaacggcaggg
agcacagacccctctaaaaagcagcaccagaacttgatatcagggtcatcatatgagcaa
gcattgaacaacaaagataagtttcccaatgataaacagggaagcggcccgcccaagggt
gtacacatacatgctgatggtcgtgtaacaaacatcccccagggtatggtagctgaccag
tttggcatggtgggtttgctaacgttcattcgatcagcagaaatggacaacagtttagta
gcgctggcgcccggcatggacctgaccaccctcggtctcaatttaaactcacctgagaac
ctgtacagtaccttccagtccccctgggtagatctcccgtgccgaccccaagacattgac
tttcacgtgccctgggaatacatgaccaatatctacatcagggataagttatcacccatc
aaactaaaccggtacggagaggacctgctgtttttcctcttctacatgaacggcggggac
gtattacagctagcggcagcagcagaattgtacaatcgagattggcgataccacaaggat
gagagagtatggcttacgcggccacctggtgtggaaccaattgtgaatggaggcacttac
gaacgaggaacatattattttttcgacgtacagaactggcgaaaagtgcccaaagaattt
cacttagaatacgagaaactggaaactcggccaactctcccttcaagattgtactataat
ccaaatcagccagtggatacccattag
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