Mya arenaria (softshell): 128238339
Help
Entry
128238339 CDS
T09995
Name
(RefSeq) nucleoporin Nup43-like
KO
K14305
nuclear pore complex protein Nup43
Organism
maea
Mya arenaria (softshell)
Pathway
maea03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
128238339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128238339
03036 Chromosome and associated proteins [BR:
maea03036
]
128238339
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
128238339
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
128238339
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WDR55
WD40_CDC20-Fz
WD40
WD40_WDHD1_1st
Beta-prop_EIPR1
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EML_2
Beta-prop_EML
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
EIF3I
Beta-prop_NUP159_NUP214
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
WDR90_beta-prop_4th
WD40_CFAP43
KNTC1_N
Motif
Other DBs
NCBI-GeneID:
128238339
NCBI-ProteinID:
XP_052810135
LinkDB
All DBs
Position
6:complement(40388236..40396747)
Genome browser
AA seq
378 aa
AA seq
DB search
MADIRVKFVSQKISKVRFRPAQGIYSQGSDVFASGNWDDESGRVCLWQIPLAQRDNGDME
GGDTATDREPTQLCETSHRGDVTDMEFLGTEAVAVSSSLGTVTVYRHRGLKSLEEASHWS
GIHSGLGHVSCACTCVATQGEDLLVSAGEDGRINVLNISHRTPIRTIKKANSCTINGVRF
LKQLEVITVDSSGQLKIFDLRQNSEEPSKTFTVSGEQTPLQSIARHPTQQHVVATGGHDG
VLSIWDLRQEKFPVTLLEAHSAPMWEVKFHPTNPEHLFTCSEDGSVWHWDSSAVTSLVTG
TGAGSGGGSLFAQPPGGAQQPQITSPWLGLESGRSKMEISTLLPNQSLPINTLDIDGETL
ICGSDEEAIYTIDIPGIR
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atggcggacatcagagtgaaatttgtgtctcaaaaaatatcaaaagttcgttttcgtcca
gcccaaggcatatactcacagggctcagacgtttttgcctcaggaaattgggacgatgag
agtggcagggtgtgtttgtggcagattcccctggcacagagggacaatggtgacatggag
ggaggggatacagcgacggaccgggaaccaacacagctgtgcgagaccagccacagggga
gatgtcaccgacatggagtttctaggtacagaagctgttgcagtctcatcatcgttggga
acagtaacagtgtacagacacagaggcttaaagagcctggaggaggctagccattggtcg
ggtatacatagtgggcttggtcacgtatcatgcgcgtgcacctgtgtggccacccaggga
gaggatctcctcgttagtgctggggaagacggcagaatcaatgtgctcaacatctcacat
aggacgcccatcagaacaataaaaaaggcaaatagctgtactatcaatggggtccgtttc
ctcaagcagctggaagtcatcacagtcgactccagtgggcagctcaagatcttcgacctc
aggcaaaactctgaggaaccatccaaaacattcacagtatctggagaacagacacccctg
cagagcatcgctcgtcatccaactcagcagcatgttgtggccactggcggccatgatggc
gtattgtccatctgggacttacgtcaggagaaattccccgtcacactccttgaggcacac
tccgctccaatgtgggaggtaaaatttcaccccacaaatcctgaacatctgttcacctgc
tccgaggatggctcagtgtggcactgggatagctccgcagttacctcccttgtcacaggc
actggagcaggatctgggggtggatccctatttgcccagccccctgggggagcccagcag
ccccagatcaccagcccctggctgggtctcgaatctgggcgttccaagatggagatctcc
accctcctgccaaatcagtccctacccatcaacaccctcgacatcgacggggaaactctc
atttgtggttcggatgaagaggctatctacacaattgacatacctggcattagatag
DBGET
integrated database retrieval system