KEGG   Mya arenaria (softshell): 128238339
Entry
128238339         CDS       T09995                                 
Name
(RefSeq) nucleoporin Nup43-like
  KO
K14305  nuclear pore complex protein Nup43
Organism
maea  Mya arenaria (softshell)
Pathway
maea03013  Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:maea00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    128238339
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:maea03019]
    128238339
   03036 Chromosome and associated proteins [BR:maea03036]
    128238339
Messenger RNA biogenesis [BR:maea03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     128238339
Chromosome and associated proteins [BR:maea03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    128238339
SSDB
Motif
Pfam: WD40_Prp19 WDR55 WD40_CDC20-Fz WD40 WD40_WDHD1_1st Beta-prop_EIPR1 Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EML_2 Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st EIF3I Beta-prop_NUP159_NUP214 MIOS_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_HPS5 Beta-prop_SPT8 WD_LRWD1 Beta-prop_DCAF12 WDR90_beta-prop_4th WD40_CFAP43 KNTC1_N
Other DBs
NCBI-GeneID: 128238339
NCBI-ProteinID: XP_052810135
LinkDB
Position
6:complement(40388236..40396747)
AA seq 378 aa
MADIRVKFVSQKISKVRFRPAQGIYSQGSDVFASGNWDDESGRVCLWQIPLAQRDNGDME
GGDTATDREPTQLCETSHRGDVTDMEFLGTEAVAVSSSLGTVTVYRHRGLKSLEEASHWS
GIHSGLGHVSCACTCVATQGEDLLVSAGEDGRINVLNISHRTPIRTIKKANSCTINGVRF
LKQLEVITVDSSGQLKIFDLRQNSEEPSKTFTVSGEQTPLQSIARHPTQQHVVATGGHDG
VLSIWDLRQEKFPVTLLEAHSAPMWEVKFHPTNPEHLFTCSEDGSVWHWDSSAVTSLVTG
TGAGSGGGSLFAQPPGGAQQPQITSPWLGLESGRSKMEISTLLPNQSLPINTLDIDGETL
ICGSDEEAIYTIDIPGIR
NT seq 1137 nt   +upstreamnt  +downstreamnt
atggcggacatcagagtgaaatttgtgtctcaaaaaatatcaaaagttcgttttcgtcca
gcccaaggcatatactcacagggctcagacgtttttgcctcaggaaattgggacgatgag
agtggcagggtgtgtttgtggcagattcccctggcacagagggacaatggtgacatggag
ggaggggatacagcgacggaccgggaaccaacacagctgtgcgagaccagccacagggga
gatgtcaccgacatggagtttctaggtacagaagctgttgcagtctcatcatcgttggga
acagtaacagtgtacagacacagaggcttaaagagcctggaggaggctagccattggtcg
ggtatacatagtgggcttggtcacgtatcatgcgcgtgcacctgtgtggccacccaggga
gaggatctcctcgttagtgctggggaagacggcagaatcaatgtgctcaacatctcacat
aggacgcccatcagaacaataaaaaaggcaaatagctgtactatcaatggggtccgtttc
ctcaagcagctggaagtcatcacagtcgactccagtgggcagctcaagatcttcgacctc
aggcaaaactctgaggaaccatccaaaacattcacagtatctggagaacagacacccctg
cagagcatcgctcgtcatccaactcagcagcatgttgtggccactggcggccatgatggc
gtattgtccatctgggacttacgtcaggagaaattccccgtcacactccttgaggcacac
tccgctccaatgtgggaggtaaaatttcaccccacaaatcctgaacatctgttcacctgc
tccgaggatggctcagtgtggcactgggatagctccgcagttacctcccttgtcacaggc
actggagcaggatctgggggtggatccctatttgcccagccccctgggggagcccagcag
ccccagatcaccagcccctggctgggtctcgaatctgggcgttccaagatggagatctcc
accctcctgccaaatcagtccctacccatcaacaccctcgacatcgacggggaaactctc
atttgtggttcggatgaagaggctatctacacaattgacatacctggcattagatag

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