Mya arenaria (softshell): 128238588
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Entry
128238588 CDS
T09995
Name
(RefSeq) 5-methylcytosine rRNA methyltransferase NSUN4-like
KO
K21970
5-methylcytosine rRNA methyltransferase NSUN4 [EC:2.1.1.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
maea03009
]
128238588
03029 Mitochondrial biogenesis [BR:
maea03029
]
128238588
Ribosome biogenesis [BR:
maea03009
]
Eukaryotic type
Other ribosome biogenesis factors
128238588
Mitochondrial biogenesis [BR:
maea03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
128238588
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Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
FtsJ
MTS
Motif
Other DBs
NCBI-GeneID:
128238588
NCBI-ProteinID:
XP_052810619
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Position
6:9456707..9462879
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AA seq
467 aa
AA seq
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MNTFIGCRKLMLKSSNSCLTFTLKRGKFKMKNKQETISKFNNCDRALENFDLYYKPVYGE
RWPSIRISLLTAKKSCVIINNFVTENEYGDTFSDLGAVDILELARKRQTAYANKMNKTNI
KQSSLDQADVLRNVSSDQYASQEDNYSNVSEEQNPVYDSIISETDRKNLDLFMPAQVVYS
DHMEQRIEEVRQSIYTPQDVKVDIVQPAPVSLSVDLTALAFPPGDVNMFPEPKTQNRGGL
LCHFMLDASSILPVLALDLHAGNRLLDLCAAPGGKGLAALQTLKPDQVLCNDISKSRLNR
LKSIMRLYVPDEHRVRIKTTLRDGQKFTQQEFDKVLVDVPCNTDRHSVLDGGRNLFSPAR
IQERIGLPKLQTELLLSGLQCVKVGGCVVYSTCTLSPAQNDGIVQSALDRLWRETNISVE
IEDLAEFRHIFSDTLSFYDSCRFGQLVIPSLSKNFGPMYFCRIRRIS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgaatacatttatcggttgtagaaagttaatgcttaaaagtagcaattcctgtttgaca
tttactttgaaaagaggaaagttcaagatgaaaaacaagcaagagaccatttcaaagttt
aacaactgtgaccgagccctggagaactttgatctttactacaaacctgtttatggagaa
aggtggccatcaataaggatatccttgcttactgccaaaaagtcatgtgttattataaat
aattttgtaacagaaaatgaatatggcgacacattcagtgatctgggcgcagtggatatt
ttagagcttgcaagaaaaaggcaaacggcttatgctaataaaatgaataaaacaaatatt
aaacaaagttcattagaccaagcagatgtgttgagaaatgtatcgagtgatcagtatgct
tctcaagaggacaattatagcaatgttagtgaagaacaaaatccagtttatgacagcatc
atcagcgaaaccgacaggaagaacctggatctctttatgcctgctcaggtggtctactct
gaccatatggagcaacgcattgaggaagtacgacagagcatttacaccccgcaggatgta
aaggttgacattgttcaaccagccccggtcagtctctcagtggaccttactgcccttgcc
ttcccacccggtgatgtcaacatgttcccagagccaaaaacacaaaaccgtggaggcctt
ctctgtcacttcatgctggatgccagttccatattgcctgtgttggccctggacctccac
gctgggaaccgactccttgacctgtgtgctgccccgggaggcaagggccttgccgcttta
cagacccttaaaccagatcaggtgctgtgcaatgatatatccaagtcacgcctgaatcgt
ctcaagagcatcatgcgtctgtacgtgccggatgaacaccgtgtccggatcaagactacc
ctcagagatggccagaaatttacacaacaagagtttgacaaggtgttggtggatgtgcca
tgtaacactgaccgacactcggtgctggacggaggaaggaacctgttcagtcctgcacgc
atccaggagcgcattggtctgccaaagctgcagacagaactacttctatcagggttacag
tgtgtgaaagttgggggatgtgtggtgtactctacctgcacactttcccccgcacaaaat
gacggcattgtgcagtcagctcttgacagactgtggcgcgaaaccaacatctcagtggag
atagaagaccttgcagaatttagacatatcttctcagacaccctttccttctatgactct
tgtagatttggacaacttgtgataccatcactttctaaaaactttggacccatgtatttt
tgcagaattcgacgaatatcgtag
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