Mya arenaria (softshell): 128238701
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Entry
128238701 CDS
T09995
Name
(RefSeq) chromatin assembly factor 1 p55 subunit isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
maea
Mya arenaria (softshell)
Pathway
maea03082
ATP-dependent chromatin remodeling
maea03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128238701
03083 Polycomb repressive complex
128238701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128238701
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
128238701
Histone modification proteins
HAT complexes
HATB complex
128238701
HDAC complexes
Sin3A-HDAC complex
128238701
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
128238701
PRC2.2
128238701
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
128238701
Heterochromatin formation proteins
Other heterochromatin formation proteins
128238701
Chromatin remodeling factors
NuRD complex
128238701
NuRF complex
128238701
NuRF complex (fruit fly)
128238701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
CAF1C_H4-bd
WD40_Prp19
Beta-prop_CAF1B_HIR1
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
EIF3I
Beta-prop_WDR75_1st
Beta-prop_EML
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_DCAF12
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
MIOS_WD40
Beta-prop_SCAP
PEP5_VPS11_N
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
128238701
NCBI-ProteinID:
XP_052810820
LinkDB
All DBs
Position
6:73314262..73325182
Genome browser
AA seq
437 aa
AA seq
DB search
MTDKDGESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVTRPEGK
DYSLHRLILGTHTVTLPSSETFGQAEQNHLLICNIKLPGPNSQTEESNYPENRGEFGGFG
SVSGKIEIEIKINHEGEVNRARFMPQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECQP
ELRLKGHQKEGYGLSWNPNMNGHLLSASDDHTICLWDINTTPKEHRVVDAFTIFMGHTSV
VEDVAWHLLHESLFGSVADDQKLMIWDTRSNNVNKPSHTVDAHTAEVNCLSFNPYSEFIL
ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSK
IGEEQSAEDAEDGPPELLFIHGGHTAKISDFTWNPNEPWVICSVSEDNIMQVWQMAENIY
NDEEPDAPASELEQQTS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgacagataaagacggagaaagctttgatgacgcagttgaagagagggttataaatgaa
gagtacaaaatatggaagaagaacacgccatttctgtacgatctggtgatgacacatgcc
cttgaatggccaagtctcactgcacagtggctcccggatgtgaccagacctgaaggaaaa
gattattcattacacagactgattttgggaacacatactgtgacgctgccaagttcagag
acatttggccaagcagaacaaaaccatcttctcatttgcaacattaagctgcctggtcct
aattcacagactgaggagtccaattacccggagaatcgtggagaatttggtgggtttggc
agtgtgagtgggaagatagaaatagagatcaagataaaccatgaaggcgaggtaaatcgg
gctcgtttcatgccccagaacccctgtattattgccaccaagacgccctccagcgatgtg
ctcgtgttcgactacactaaacacccatcaaaaccagatccgagtggagaatgccagccg
gagctgcgactgaagggccaccagaaggaaggctatggcttgtcatggaacccaaacatg
aatggccaccttctcagtgcttctgatgaccataccatttgtctttgggatatcaacaca
accccaaaagaacacagagttgtggatgcattcaccatattcatgggacacacttcagtt
gtagaggatgttgcctggcatcttctgcatgaaagcctgtttggttctgtggcagatgat
caaaagttaatgatctgggacacccggtctaacaatgtcaacaaaccgagtcacacagtg
gatgcccacacggccgaggtcaactgcctctcctttaacccttacagcgagttcattctg
gctacaggctctgcagacaagactgttgccctgtgggacttgagaaacttgaagctaaaa
ctgcactcctttgaatctcataaggacgagatcttccaggtgcagtggtcgccccacaat
gagactatcctagcatccagtggcacagataggcgactgcatgtgtgggacttgagcaag
ataggggaggaacagtcggcagaagatgctgaggacggaccaccagaactcctgtttatc
catggcggtcacacggccaaaatatctgacttcacttggaaccctaacgagccatgggtg
atctgttctgtctccgaggacaacatcatgcaagtctggcagatggctgagaacatttac
aatgatgaagaaccagatgcgcctgccagtgaactggaacaacagacctcatga
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