Mya arenaria (softshell): 128239057
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Entry
128239057 CDS
T09995
Name
(RefSeq) toll-like receptor 4
KO
K18808
toll-like receptor 13
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
maea04054
]
128239057
Pattern recognition receptors [BR:
maea04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128239057
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
TIR_2
LRR_14
LRR_9
SmpB
Motif
Other DBs
NCBI-GeneID:
128239057
NCBI-ProteinID:
XP_052811457
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All DBs
Position
6:3807939..3812802
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AA seq
918 aa
AA seq
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MWTENGKLWCIRAFFVIHSVQMSSSSLESSASFQTGNASIRDYEKMTSERFGTRHFPFSP
HNFEWFKIFTKNENTRINIDNNTSNMVYCQLCTCYNASDGMHVDCSFRGISKAFNDISKD
TVILTYRGNKLGKVMETDFQGLEHLIWLDLSQNEILKIEEGAFDDLKNLQVLLLNNNRFI
TMTGTLFPQDSFASLHNLRILTLHGNIEYYLLNVSKIDSKLFRSLYRLEYLTTDGIFNIE
FDENYRNTNLSTLVMSSMIGQCGIVSLSNKTFRGLPKLRQLTMTGCKISQITENIFSSVP
LLAYLDISNNFKLGLYNAIGPLAKSLNPFNIKNLKMNFVSNPDDVGTQLTKENMKYINAM
SLVHLEMDSNNIEIFEKRALNMSRGTIRTLSMQNNNLFFSLFVEAIIWGNPSLVEVDLRD
QFKYKIPAIEHTNSMYSKLTPSRDQFKNKIPAPGVINTLYTKGMLSRNQENVISLKQFSF
TGSRHLFKPLDFYNTSNSLWYMDISENRITRLKKNHFENLKHLTFLNLSNNYIEAIDTNS
FKDLVALTHLFLQNNLLGFEMGFGNLDDIFKALLHLEHLNLARNRIYTIKKDMFSSCKRL
HFLDLSDNYLNNLDIDVSQLQNLFLLNLRTNRIQSFPLAVQKGLEAISNHTALTVNLVDN
KLVCSCGNLNFLKWVLSSNITFVKRPSYECTFINGTSLFIRSEMICSLEMECHRYLTVII
TCTALASLFLAIITAAIGYRYRWHILYWYYMAKLKDRTQGEQNTTYERLFEWDAYISYDD
EDLHFVAAKMQPELEERLHYKLHIRERDFVLGETNSLNILNAVQQSKRTILIISRHFLKN
KWCNFEINMAMIEGIKSERGVVVLVFLEKIPASFMPKDLAALLTQCPVVDWPQCEDVAEA
FWDKLVNDIDDYNVNSDK
NT seq
2757 nt
NT seq
+upstream
nt +downstream
nt
atgtggacagaaaacggtaaactatggtgcattcgtgcattcttcgtcatacattcagtc
caaatgtcgtcttcttcattggaaagttcggcatcttttcaaaccggaaatgcatcaata
agggattacgagaaaatgaccagtgaaaggtttggtacaagacacttcccgttcagtcct
cataactttgaatggtttaagatcttcacaaagaacgagaatacaaggatcaacatcgat
aacaatacgtctaacatggtttactgtcagctatgcacatgctacaacgccagtgatggg
atgcatgtagactgttccttccggggaatttcaaaggcatttaatgatatttctaaagac
actgttatattgacatatcgaggaaataaattaggaaaagttatggaaacagacttccaa
gggcttgaacatcttatatggcttgatctgtctcaaaacgagattcttaaaattgaggag
ggcgcatttgatgacctgaagaatctgcaagtcctgctcttgaacaataaccgctttatt
acaatgacaggtactttatttcctcaggacagttttgcatctttgcacaacctgcgtatc
ttgactttacatggcaatatagagtattaccttttaaacgtctcaaagatagatagcaaa
ctgttccgttctctttaccgcttggaatacctgaccacagatggtatatttaacatagaa
ttcgatgaaaactatcggaatacaaatctgtcaacattggtgatgtcttcaatgatcggg
caatgtggaatagtgtcgctttcgaacaaaacatttcgaggcctaccaaaactaaggcaa
cttaccatgactggatgcaaaatatcacagattacagaaaacatattctcatcagtgcct
ttgctggcatatttagatatttcaaataactttaagttgggtttatacaacgctatcggc
cctttggcgaagagtttaaatcctttcaacattaaaaacctaaaaatgaattttgtttca
aatcccgatgacgttggcacacaacttaccaaagaaaacatgaaatacattaatgcgatg
tcgctagttcatttagaaatggattcgaacaatatagaaatatttgaaaaaagggcgttg
aatatgtcacgtggtacaataagaacactatcaatgcaaaacaacaaccttttcttttcg
ttatttgtggaagcaataatttggggaaacccgagtttagttgaagttgaccttcgtgac
cagttcaaatacaagatccccgctatcgaacataccaattcgatgtactctaaacttacg
ccatcacgtgaccagttcaaaaacaagatccccgcccctggcgtcatcaataccttatac
actaaaggtatgttatcacgtaatcaggaaaacgtgataagtctcaaacagttttcattc
acagggagtcgtcatttgttcaagccccttgatttttacaacacgagcaactccctctgg
tatatggatatttcagaaaatcgcatcacccggctgaagaagaatcatttcgaaaacctt
aaacatcttacatttttaaatctttctaataattatatagaagcgatcgacacaaactcc
tttaaagacttggttgcattaacgcacttatttcttcaaaacaatctgcttgggttcgaa
atgggtttcggaaacttggatgacatatttaaagcacttctccatcttgaacacctaaat
cttgcccgtaacagaatctacacaataaagaaagacatgttttcctcttgcaagcggttg
catttcctagatttgtcagacaattacctaaataatcttgacatagatgtaagccaatta
caaaatctgtttctattgaatcttagaacaaaccgcattcagagctttcctctcgcagtg
caaaaagggttggaggcaatatccaatcacactgcgttgactgtaaacctcgtggacaac
aagcttgtgtgtagttgtggaaatctaaactttctcaagtgggttctgagttcaaacata
acattcgtgaaaaggccaagttacgaatgcacatttatcaatggcaccagtctctttata
cgatcagaaatgatatgttcactggaaatggaatgccaccgatacctgaccgtgatcata
acgtgtacagcattagcctccctcttcctggcgatcattacagctgctattggataccga
taccgttggcatattctttactggtactatatggcgaaacttaaagacaggacacaaggt
gaacaaaataccacgtacgaacggctttttgagtgggatgcatatatatcgtatgatgat
gaagacttgcatttcgttgcagcgaaaatgcaaccagaacttgaggaacgacttcattat
aagctacacattcgagagagggactttgtccttggtgaaaccaactccttaaacatactc
aatgcagtacagcagagcaaacgaacaattctcatcataagcagacacttccttaaaaac
aagtggtgcaatttcgaaataaacatggccatgattgaaggcattaaaagtgaaaggggc
gtggtggttctggtgttccttgagaagataccggcgtcgtttatgccgaaggatcttgcg
gcgctcctcacacagtgtcccgtggttgattggccgcagtgcgaggacgtggcagaagct
ttctgggataagttggtcaatgacattgacgattacaatgtcaatagtgataaatga
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