KEGG   Mya arenaria (softshell): 128239331
Entry
128239331         CDS       T09995                                 
Name
(RefSeq) WD40 repeat-containing protein SMU1
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
maea  Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:maea00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:maea03041]
    128239331
Spliceosome [BR:maea03041]
 Complex B
  Other components
   Complex B specific factors
    128239331
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_EML_2 WDR55 WD40_CDC20-Fz WD40_MABP1-WDR62_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st LisH_TPL WD40_MABP1-WDR62_1st WDR90_beta-prop_4th NBCH_WD40 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_NWD2_C Beta-prop_DCAF4 Beta-prop_Vps41 Ge1_WD40 Beta-prop_WDR35_TULP_N Beta-prop_IFT140_1st Beta-prop_TEP1_C Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_SPT8 Beta-prop_SCAP Beta-prop_VPS8 Mala_s_1-like Beta-prop_BBS7 WD40_RFWD3 Beta-prop_WDR11_2nd VPS8_N LisH_WDR26 Beta-prop_EIPR1 PD40 LisH_PAC1
Other DBs
NCBI-GeneID: 128239331
NCBI-ProteinID: XP_052811901
LinkDB
Position
1:complement(4713707..4733494)
AA seq 513 aa
MAVEIESADVVRLIEQYLKENNLMKTLTVLQEEAGISLNTVDSVDGFISDITSGHWDTVL
QAIQSLKLPDQKLIDLYEQIVLELIELRELAAARSLLRQTDPMIMLKHNQADRYIHLENM
LARSYFDPREAYPEGQTKEKRRTAIAQALSGEVNVVPPSRLLALLGQALKWQQHQGLLPP
GTTIDVFRGKAAVKEQEEEKYPTQLNKTIKFGQKAHIECARFSPDGQYLVTGSVDGLVEV
WNFTTGKIRKDLRYQSQDNFMMMDEAVLCMCFSRDSEMLATGDQGGKIKVWKILTGQCLR
KFDRAHSKGITCVNFSKDNSQLLSSSFDQAIRVHGLKSGKTLKEFIGHTSFVNDSVYTQD
GHHIISASSDGTIKVWNFKSQECQSTFKSFGGQSGADITVNSIHPLPRNAEQFVVCNRSN
TVVIINMQGQIVRSFSSGKREGGDFICCTISPRGEWIYCVGEDMVLYCFSVSTGKLERTL
TVHEKDVIGISHHPHQNLVATYSEDGLLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atggcagtcgaaatcgagtcggcagacgttgttcgtctcattgagcagtatctgaaagaa
aacaacttgatgaagactttaacagtgctgcaggaggaggctggtatctcgttaaacacg
gtcgactctgtggatgggtttatatcggacattacgagcggtcactgggacaccgttctg
caggccatacaatctctcaaactccctgaccaaaaacttatagacctctatgaacagatt
gtgttggagctgatagaattgcgagagttggcagctgcgaggtcgctgttacgacagact
gatccaatgatcatgttgaagcacaaccaggcagacagatacattcatcttgaaaacatg
ctggcccggtcatacttcgaccctagggaggcctaccctgagggccagacaaaggaaaag
aggcgtacagcgatcgcgcaggctttgtcgggggaagtaaatgtggttcctccgtcacgt
ctactggctttgctgggacaggcactgaaatggcagcaacatcaggggctgctacctcca
ggtaccaccattgatgtgttccgaggtaaggctgctgtgaaagaacaggaagaagagaaa
taccccacacagctcaacaaaactatcaagtttggtcagaaagcccacattgagtgtgca
aggttctccccggatggacagtacctcgtcacagggagtgtcgacgggctggtggaggtg
tggaacttcaccacgggaaaaatcagaaaagatctccgctaccaatcacaggacaacttt
atgatgatggacgaggctgtcctgtgtatgtgcttcagtcgtgactcggaaatgctggct
acaggtgaccagggagggaaaataaaggtgtggaagatcctgacaggtcagtgtctgcgg
aagtttgaccgcgcccacagtaaggggatcacatgtgttaacttctccaaggacaacagt
cagcttcttagctcctcatttgaccaggctatcagagtacatggtctaaagtccgggaag
acattgaaggagtttataggccatacatcgttcgtgaatgattccgtgtacacacaagac
gggcatcatatcatcagtgcaagttcagatggcacaatcaaagtttggaactttaaaagc
caagaatgccagtccacatttaagtccttcggcggtcagtcaggtgcggacatcactgtg
aacagtatccacccattgccaagaaacgcggaacagtttgtggtgtgtaaccgtagtaac
acagtcgtcatcatcaacatgcagggacagattgtgcgttcattctcgagcggaaagcgt
gagggtggtgattttatctgctgtacgatatcgccccgtggagagtggatctactgtgtc
ggagaagatatggttctctactgcttcagtgtctctacggggaaactggagagaactctt
actgtccatgagaaagatgtgatcggcatttcccaccatccacaccagaaccttgtagcc
acgtacagcgaagatggcctactaaaactctggaaaccgtag

DBGET integrated database retrieval system