Mya arenaria (softshell): 128239353
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Entry
128239353 CDS
T09995
Name
(RefSeq) PR domain zinc finger protein 1-like isoform X1
KO
K24501
PR domain zinc finger protein 1 [EC:2.1.1.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
maea03000
]
128239353
Transcription factors [BR:
maea03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
128239353
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PRDM2_PR
zf-H2C2_2
zf-C2H2
zf-C2H2_4
SET
C2CH-3rd_BIRD-IDD
zf-C2H2_jaz
zf-C2H2_6
Zf-C2H2_ZNF451_C
zf-MYST
zf-C2H2_15
zf-met
STL11_N
LIN13_zf
Zf-C2H2_ZNF451
Motif
Other DBs
NCBI-GeneID:
128239353
NCBI-ProteinID:
XP_052811932
LinkDB
All DBs
Position
6:82518298..82567785
Genome browser
AA seq
910 aa
AA seq
DB search
MCDSDENDSMDGMYAVEDTWIQQEEPDNSLEDGWDMTQLKEDEFEEFCVYIVHDRACEKV
CRNRAQASLPRNLTLKPSLTQPDNAQGVWSVDYIPRGTRFGPLNGIITPEEPVRRGDTNR
ICLWKIFKDNRTCKYMDVGDTSRSNWMHYVNFSYNSNQQNLIACQIDFNIYFYTIKPIPP
NTELLVWYCREYAERLNVPKTGEEMLQAWKRQIVGQPTPMPLPTYIEERHLCLNRHPLPS
PQGSSPSKVKDRSHGVKDEHCDSDDSGVREDGYAIDYSLHKRDGSPTSDDLDHGIHGKRS
SLHLDDSLSPFKSPKFNFGSGSAFTSKISPIASVKSSLPSIMAPSPIKPHFSTPKRSLSS
GFYENLFLKKVKENSEDSDEGRHKYKEPNVSQGQDFKPDIKDINKSESDKTPDTDSKDIK
IPTSEPFAPLPLKFPGMMMDNKPMNQMMNPFLGPNPEDMYSKFMPGSMGKMPPGPGPMYF
PPAGLPGMYPFSPMFPYGPYQHLPWPMFPPGYPPMSMGGSQPPLPHPAPHLQQSPFPRPP
TSGAPSGESQILNLSKPKSSFEARGHRSLPYPLRKKDGKMLYECKFCMKTFGQLSNLKVH
LRTHTGERPFICKTCNKGFTQLAHLQKHHLVHTGEKPHECSVCHKRFSSTSNLKTHMRLH
SGEKPFQCKLCPAKFTQFVHLKLHKRLHTNERPYECPQCNRKYISASGLKTHWKTGNCIP
SGLSMDYTMLIQRTTEAAIKEMSEFGDMHDIALIDNGEYEKFDKASATDKSIRKDLENGS
ENQTDERLHFESLNKDREDSMDNSDMINSKADSSSRPLTPNSATYDSYHSDDLDEEDEGH
MSPVGQNDLEHSNQSALSPTSDFSQGQQIDLFRERMKQAMENPDNSSILHQSLQQNQLHF
QQPLDCSTNC
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgactcggatgagaatgactctatggacggcatgtatgcagtagaagacacttgg
attcagcaggaagagcctgacaacagccttgaggatggctgggacatgacgcagctgaag
gaggatgagtttgaggagttctgcgtctacatcgtgcacgaccgcgcatgcgagaaagtg
tgtcgaaaccgagcacaggcctcccttcctcgcaaccttaccctgaaaccatcccttacg
cagccagataatgctcagggagtgtggagtgtggactacattccgcggggaactagattt
ggcccgcttaacggcatcatcacccctgaagaaccagtgcgccgaggtgatacaaacaga
atatgcttgtggaagatcttcaaagacaacaggacatgtaaatacatggatgtcggagac
acaagtcgtagcaactggatgcattacgtcaactttagctacaattccaatcagcaaaac
ctgattgcctgtcaaattgatttcaacatctacttttacacgataaaaccgattcctcct
aacacagagctactagtctggtactgtcgggagtacgcggagagactcaacgtcccaaaa
accggggaagaaatgcttcaggcttggaagcgccagattgttggtcagcccacaccaatg
ccgctgcccacatacattgaagagcgccacttatgtctcaaccgccaccccctcccttcc
cctcaggggtcatcaccctccaaagtcaaggacaggagtcatggggtcaaagacgaacac
tgcgacagtgacgacagtggtgttcgtgaggatgggtatgcgattgattacagcctgcat
aaacgtgatgggagccccaccagcgatgacttggaccatggtattcatggaaaaaggagc
tctcttcacttggacgactccttgtcaccatttaagagccctaagttcaactttggctca
ggaagtgcctttaccagcaagatctcacctatagcctctgtgaaaagcagcttgccaagc
atcatggctccctcgcccattaaacctcatttcagcaccccaaaacgaagtctcagctct
ggattctatgaaaatctgttcttgaagaaagtaaaggagaacagtgaagactcagatgaa
gggagacataaatacaaagagccgaatgtgagtcaaggacaagatttcaagcctgacatt
aaagacattaataagtctgaatcagacaaaacaccagacactgactctaaggatatcaag
attccaacatctgaaccctttgctccattgcctctaaagtttcctggtatgatgatggac
aacaaaccaatgaatcagatgatgaacccatttctgggtcccaaccctgaggacatgtat
tctaagttcatgcctgggtcaatggggaagatgcctccgggcccgggtcccatgtatttc
cctcctgcgggccttcccgggatgtaccctttcagcccgatgtttccatatgggccttac
caacatctgccgtggccaatgttcccccctggctaccctccaatgagcatgggtggctcc
cagcccccactcccccatccggcgccccatctccaacagtcaccatttccccgcccacct
acctcaggggcacccagtggggaatcacaaattctcaaccttagcaagcctaagtctagc
tttgaagctcgcggccacagatccttgccttaccctctcaggaaaaaagatggtaaaatg
ctttacgaatgcaagttttgcatgaaaacatttggacagttatcaaatctcaaggttcat
ctcagaacccacactggcgagaggccttttatctgtaagacgtgtaacaaggggttcacc
cagctcgctcacttacagaaacaccatctggtgcacacgggtgagaaacctcatgaatgc
tccgtctgtcacaagcgcttcagctccacctcaaatctcaagacacacatgcgcttacac
agtggcgaaaagcctttccagtgtaaactctgtccagccaagtttacccagtttgtccac
ctgaagcttcacaagaggttacacacaaacgaacgtccgtatgaatgtccacagtgcaac
aggaaatacatcagcgcgagtgggctgaaaacacactggaagactgggaactgtattccc
tcagggctcagtatggactataccatgctgattcaaagaacaacagaggctgctataaaa
gagatgagcgaatttggtgatatgcatgacattgctctgatcgataatggtgaatatgaa
aaatttgataaggcttctgcaacagataaatcaatcagaaaagacttggaaaatggcagt
gaaaatcaaactgatgaaagattacattttgagtcattgaacaaagatagggaagactca
atggacaactctgacatgataaattctaaggcagattcctctagtcgacctttgaccccc
aatagtgctacatatgacagttaccatagtgatgacctcgatgaggaagacgaaggtcac
atgtcaccagtaggtcagaatgaccttgaacattcaaatcagtctgcactctctccgacc
tctgacttttctcaaggtcagcagattgacctatttagggaaagaatgaaacaagcgatg
gaaaatcctgataacagctctatacttcatcaatccttacagcagaatcagcttcatttt
cagcagccattagattgctcaacaaactgttaa
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