Mya arenaria (softshell): 128239395
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Entry
128239395 CDS
T09995
Name
(RefSeq) DNA mismatch repair protein Msh2-like
KO
K08735
DNA mismatch repair protein MSH2
Organism
maea
Mya arenaria (softshell)
Pathway
maea03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
128239395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
maea03400
]
128239395
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
128239395
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
TPR_HPS5_insect
Motif
Other DBs
NCBI-GeneID:
128239395
NCBI-ProteinID:
XP_052811979
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All DBs
Position
6:complement(32454775..32476987)
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AA seq
926 aa
AA seq
DB search
MALQPNQELKLDLPQEQGFLSYFRSLPEKSSTTLRFFDRTEYYSVHGQDAVFVAKEVFKT
TSVVKMLGSGERKVESVTLSRMNFESLVRDLLLVRQYRVEVYKNKGGAKNNDWSLGFKAS
PGNLTQFEDILFGSVDMANSVGVIGVKLAADKLVGVGYADATLRKFLVTEFTDNDQFSNL
EALLVQLGPKECLIASSDVSNDGGKLKEVLERSGVMITERKKSEFSSKDSVQDMNRLLKV
KKGEQANAAALAEIEKQQAMSALGAVVHYLELLSDDTNFGQYTLTTFDLGQYMRLDAAAV
RALNLLPNTLEGGNKNQSVLGLLNRCRTAQGQRLLGHWVKQPLVDINKIEERLNIVEALV
EDTELRQTLYEDQLRKIPDFQRLAKKFQRKKANLQDVYRVYQAIDKMPYLLETLERTDSQ
HKTLLMHVFSNPLKEMLMDFAKYQEMVEATMDLSQVENHEFVIKADFDEGLTALKERIDS
LEESIKGQMNKVSRDLGLEPNKVLKLESSAQLGYYFRVTLKEEKALRNNKNYITLDTKTN
GVRFHNKAMAEYNREYIGAKEEYGEQQKSVVAEVVNIASGYVEPMLLMNDILAQLDVLVS
FSQVSTCAPIPYIRPTVREKGSGVIRLTEARHPCLEMQDDIAFIPNDISFEEGKQMFHII
TGPNMGGKSTYIRSVGVIVLMAQLGCFVPCSKAEISIVDSILARVGAGDSQLKGVSTFMA
EMLETAAILRSATEDSLIIIDELGRGTSTYDGFGLAWAISEHIATKLKSFCLFATHFHEL
TSLADQVPTVNNLHVTALTTNDTLTLLYRVKPGVCDQSFGIHVAELAHFPKHVVEFAREK
ACELEDYQCVSLTGTDLEGDGEPAVKKRKLVKQEGEELISGFLTQVRSLPMGSLSDQELE
EKVAALRADVLAKNNSYIADILARKA
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atggcacttcagccgaatcaagaattaaagcttgacctgccacaggagcaaggctttttg
agttacttcaggtcactgccagagaaatcttcaacaactctacgtttctttgataggacg
gaatactacagcgtccatggtcaagatgctgtgtttgtggcaaaggaagtgtttaagact
acatccgtcgtcaaaatgctgggatccggtgaaagaaaggtggagagtgttacgttgagt
cgtatgaatttcgagtccttagtgcgagacctgctcctggttcgtcagtaccgcgtcgag
gtgtacaagaacaagggaggggccaagaacaatgactggagtctgggcttcaaggcgtct
cctggcaaccttacccagtttgaggacattctattcgggagcgtagatatggccaactct
gtgggcgtcattggggtgaagctggcagctgacaagcttgtgggtgtcgggtatgctgat
gccaccctgaggaagtttctcgtcaccgagttcacagacaatgaccagttctcaaacctt
gaggcgttgttggtacagctgggaccaaaagagtgccttattgcatccagcgacgtgagt
aacgatggcgggaaactgaaagaagtgcttgaacgcagtggggtcatgatcacggagagg
aaaaaaagtgagttcagcagtaaggacagcgtacaggacatgaatcgacttctcaaagtg
aagaaaggagaacaagcgaacgcagctgctctcgctgaaatagagaagcagcaggcaatg
tctgcgcttggggccgtcgtccactacttagagctcctctcagatgacacaaacttcggc
caatacacactcacaacctttgaccttggccagtacatgaggctggatgctgccgctgtc
cgggcactcaacctgttacccaatactctcgaaggagggaacaaaaaccagtctgtccta
ggattgctgaacaggtgtagaactgctcagggtcagaggttactggggcactgggtcaaa
cagcctcttgtggatatcaacaagattgaggagcgtttgaacattgtggaggccctggtc
gaggacactgagctacgacagacgctgtacgaggaccagttacggaagattccagacttc
cagaggctggccaagaagttccagagaaagaaggccaaccttcaggatgtgtaccgggtg
tatcaagccattgacaagatgccatacctgctggagactctggaacgcacagacagccaa
cataagacactgctcatgcatgtcttctcaaaccctctgaaggagatgttaatggacttt
gccaagtaccaggagatggttgaagccactatggacctgagccaggtggagaatcatgag
tttgtgatcaaagccgacttcgatgaaggcctcactgccctcaaagagcggatagactca
ctggaggagagtattaaaggacagatgaacaaggtgagtcgggaccttggattggaacct
aacaaagtcttaaagcttgaaagcagtgcacagctggggtactacttccgtgtgaccttg
aaagaggagaaagccctccgtaacaacaagaactacatcaccttagatacgaagaccaac
ggggtccgcttccataacaaggcgatggccgagtacaaccgggagtatattggggcgaag
gaggagtatggagaacagcagaagagtgttgtcgctgaagttgtcaacattgcttcgggc
tatgtggagccgatgttactgatgaacgatattcttgcccagcttgacgtgcttgtcagc
ttttcccaggtgtccacgtgtgcgcccataccttacatacggccaacagtcagggagaag
ggtagtggggttatccgattgacggaggccagacatccatgcctggagatgcaggatgat
atcgccttcattccgaatgacatctcttttgaagagggtaaacagatgttccacattata
accggaccaaatatgggaggaaaatccacatacatcagatctgtaggtgtgattgtatta
atggcccagctaggctgttttgtgccctgcagcaaggcggaaatctctatagtggacagt
attttggcgcgtgtgggggctggtgacagtcagctgaaaggcgtgtcaacgttcatggcc
gagatgctagaaactgcggccatactcaggtctgctactgaggattctctgatcattata
gatgagctaggcagaggaacctccacctatgacggctttggcctcgcctgggcaatctca
gagcacatagcaacaaagctgaagtcgttctgcctgtttgcgacccatttccatgaactg
acgtcgttggcagaccaggtgccgacggtgaataatctacatgtaactgcccttaccacc
aacgacacactgacgttactgtacagggtcaaaccaggtgtgtgtgaccagagttttgga
atccatgttgcagaactagcccacttccctaaacatgtggtggagtttgcacgagagaag
gcatgtgagctggaagactatcagtgcgtcagtctcacgggaactgatctggagggagat
ggggaaccagcagtgaagaaacgtaaacttgtcaaacaggagggtgaggagttgatttct
gggttcctgacccaggtgcggtcactgcccatgggctcgctgtccgatcaagaactggag
gagaaagtggcggcattgagggctgacgtgctcgcgaagaacaactcgtacatcgctgat
atactagccaggaaggcttga
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