Mya arenaria (softshell): 128239434
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Entry
128239434 CDS
T09995
Name
(RefSeq) putative nuclease HARBI1 isoform X1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128239434
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Gene silencing
Transposable elements
128239434
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_4
DDE_Tnp_1
Plant_tran
HTH_Tnp_4
Sigma70_r4
HTH_23
DDE_Tnp_1_2
Motif
Other DBs
NCBI-GeneID:
128239434
NCBI-ProteinID:
XP_052812019
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Position
6:complement(58725578..58733574)
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AA seq
293 aa
AA seq
DB search
MRLIGGDIRKSGRGRSIDPETQVLVTLRYMAKGDFYSETGDVHGVSRSSVCRIIHNVVTS
INKRLHNIRFPRTNEDILHTKVMFQRSCGLPNCLGAVDGTLVPIIAPKQNEEAFVSRKGC
HALNVQAVADADMRFTDVVCRWPGASHDAMVFDNCALKEHLEATNIGHLLGDSGYPLKPF
LMTPYLHPGSPAEERFNKAHKRGRVVVERSFGVLKARFRCLSKSGGCLPFAPEKSANIIL
CCFKLHNLCLERGLPLPDISSDNDDSQTPGEFIHECGRGGIQRRNELTQLFSR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttgataggaggtgacataagaaagtcaggaagaggcaggagtatcgaccccgaa
acacaggtgctagtaactctacgatacatggcaaagggagatttttattccgagacaggc
gacgttcatggggtctcgcgatctagtgtgtgtagaattattcataatgttgtgacaagc
ataaacaaacggctacacaatataagatttccaagaaccaatgaagatattcttcataca
aaggtcatgtttcagcgcagctgtggactgcccaactgccttggggccgttgatggcact
ttagtgccaatcatcgcccctaaacaaaatgaagaggcctttgtttcaaggaagggatgc
catgcattaaatgtacaagccgtagcagatgctgacatgcgtttcacggatgtagtttgt
cgatggccaggcgcttcacatgatgcaatggtgtttgataattgcgcattgaaggagcat
cttgaggcaacaaacatcggccacctattaggagacagtggatacccattgaaacccttt
ttgatgacaccgtacctacatccaggatctcctgcagaggaacgcttcaacaaggcccat
aaaaggggccgagtagtagttgagcgctcgtttggcgtgctgaaggcaagatttcgatgt
ctcagcaagagcggtgggtgtctgccattcgccccagagaagtcggcaaatataatattg
tgttgtttcaagctgcacaatctgtgcttggaaagagggctgcctcttccggacatttca
tcagacaatgatgacagccaaacgcctggtgaattcatacatgaatgtggaagaggagga
atacaaaggcgaaatgaactcacccaacttttctcgagataa
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