Mya arenaria (softshell): 128239466
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Entry
128239466 CDS
T09995
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin assembly factor 1 subunit B-like
KO
K10751
chromatin assembly factor 1 subunit B
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128239466
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
128239466
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_CAF1B_HIR1
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_TEP1_2nd
Beta-prop_EML_2
EIF3I
ANAPC4_WD40
WDR55
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
B-prop_COPA_B_2nd
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_1st
Ge1_WD40
WD40_MABP1-WDR62_2nd
Beta-prop_WDR75_1st
NBCH_WD40
Beta-prop_RIG_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_EML
WDR90_beta-prop_4th
eIF2A
Beta-prop_WDR75_2nd
Beta-prop_DCAF12
Beta-prop_Nup120_160
Beta-prop_HPS5
Motif
Other DBs
NCBI-GeneID:
128239466
NCBI-ProteinID:
XP_052812069
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All DBs
Position
6:83222119..83240724
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AA seq
623 aa
AA seq
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MKVTTPEISWHERDPIYSVDIQPGSRSVRRLVSGGVDKFVRIWQIKEDIDGKACVDFLAN
LKRHTKAVNVCRFSPDGEVLATAGDDSVIIFWKLSETEAPSVNIFQEDEEDNKENWCMLK
ILRGHLEDIYDVSWSADGKFMISGSVDNSAILWDLTKDQKICLINEHNSFVQGVAWDPRN
EFVATLSPDRSCRVYNIATRNCVHNIKKMSLPASHTVKPSSENDEENKESKPKTFRMFHD
DTMRSFFRRLTFSPDGELLIIPAGLVETDPVTNATFVFTRACLNKPALYLPSPDKVTIAV
RCCPQKFQLRKIPKNLHIEQDQENNNMKEWEKYSTLFCLPYRMVFAVATEDSIQLYDTQQ
PQPFGYVTNIHYHQLSDLAWSSNGCTLVASSTDGYCTLVTFSPGELGDPFIEEGKLEAKN
SCDNQSIAMDTETTSDSLNLHLENSTDSNNSGEKTGTKHPSPPKPAPVPMMMKVKSADGK
PRNIQITTLSSVPSASGDAASEPQIKVRSADGKPKNVQFTTLATFTSPKNKQPMSPSSAT
SKILKEKTRNNSGSECVVIEDSNSPIKLSTLESTPKSASISNKTGVTPKSGDTPKSTPKR
VQLTTIKLFDSSPVAKPSTSEQS
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtgacgactcccgagatttcttggcatgagcgggacccaatttacagtgttgac
atccagcctggtagtcgctctgttcgacgtttggtctctggaggcgttgataaatttgtg
aggatttggcaaatcaaagaagatatagatggaaaggcatgtgtagatttccttgccaac
ttaaaaagacacacaaaggcagtcaatgtttgcagattttcaccagatggtgaagttctg
gccactgctggagatgatagcgtgattatcttctggaagttgagcgagacagaggcaccc
tcggtgaacatatttcaggaggatgaggaagacaataaggaaaactggtgtatgcttaaa
atactcaggggtcatttggaggatatctacgatgttagctggtcagcggatggcaaattc
atgatctcaggctcggtggacaatagtgctatactctgggaccttactaaagatcagaaa
atatgcctgattaatgaacacaacagttttgtacagggagtagcatgggaccccagaaat
gagtttgtggcaacactaagtccagatagatcctgtagagtgtacaacattgccaccaga
aattgtgttcacaacatcaagaaaatgagcctgcctgcaagccatactgttaaaccttcg
tcagaaaatgatgaagaaaacaaggaaagcaaacccaaaactttccgcatgtttcacgac
gacacaatgcgttcgtttttccgtcgcctcactttcagtccggacggagagctgctgata
ataccagcaggcctggtagaaacagatcctgtcacaaatgccacgtttgtgttcaccagg
gcttgtctgaacaaaccagctctatacctgcccagccctgacaaagtgaccatcgcagtg
cgctgctgtccacagaagtttcaactccggaaaataccaaaaaatctgcacattgaacaa
gatcaagaaaacaacaacatgaaagaatgggaaaaatactccacactgttctgtttgcct
taccggatggtgtttgctgttgcgacagaggattccatacaactgtacgatacccagcag
cctcagcccttcggctacgtcaccaacatacactaccaccaactctcagaccttgcatgg
tcatcaaatggttgtacgctggtagcctcttcaacagacggctactgtacactggtcact
ttttcccccggtgaactaggtgatccgttcatagaggagggaaaactggaggcaaagaac
agctgtgataaccagagcattgccatggatacagagactaccagtgacagtttaaatctt
cacctggagaactccacagacagcaataactcaggggagaaaacagggaccaaacacccc
tcccctcccaagcctgcaccagtgccaatgatgatgaaagtcaaatcggccgatggaaaa
cccagaaacattcaaataactactttaagctctgtgccatctgctagcggtgatgcagct
agtgaaccacaaatcaaagtgaggtcggctgatggtaaacccaagaacgttcaatttacg
actctggcaaccttcacaagcccgaagaataaacagccaatgtctccttcatctgccacc
tcaaagattttaaaagaaaagacaagaaataattctggtagtgagtgtgttgttattgag
gattcaaattctcctataaaattgtctacgctggaaagcactcccaagtctgcatctata
tcaaacaagactggtgtaactccgaaatcaggggacactccaaaatcaacacccaaaaga
gtccagttaacaactataaagctgtttgactctagtccagtggctaaaccatcaacttca
gaacaatcttaa
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