Mya arenaria (softshell): 128239766
Help
Entry
128239766 CDS
T09995
Name
(RefSeq) transcription initiation factor TFIID subunit 5-like
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
maea
Mya arenaria (softshell)
Pathway
maea03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
128239766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128239766
03036 Chromosome and associated proteins [BR:
maea03036
]
128239766
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
128239766
Coactivators
SAGA/TFTC/STAGA complex
128239766
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
128239766
STAGA complex
128239766
TFTC complex
128239766
SAGA complex
128239766
SLIK complex
128239766
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_2nd
WD40_Gbeta
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_EML
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_Aladin
NBCH_WD40
DSE1_N
Beta-prop_RIG_2nd
CFAP251_N
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_IFT140_1st
PAC11
Beta-prop_HPS5
Beta-prop_WDR41
WD40_RFWD3
TFIID_NTD2
ASA1
WD_LRWD1
Beta-prop_EIPR1
Beta-prop_WDR19_1st
Beta-prop_SPT8
eIF2A
Beta-prop_DCAF4
Beta-prop_NOL10_N
Beta-prop_WDR35_TULP_N
Beta-prop_ACSF4
Ge1_WD40
Beta-prop_WDR75_2nd
Tricorn_2nd
TRM82_WD
WD40_like
PROPPIN
Cytochrom_D1
DDDD
Motif
Other DBs
NCBI-GeneID:
128239766
NCBI-ProteinID:
XP_052812146
LinkDB
All DBs
Position
7:complement(3563856..3598872)
Genome browser
AA seq
509 aa
AA seq
DB search
MKGSQIMENFKSSKFVLKMSRDSYTHLKRFLQEKHMNVLLNIIQEHMFIDVFDGVPRTKH
QIDMTSGGLLGEAARDANKTKILHGLLKEPDINIPVDDDDDGGGDGEDKPKKKKQKKDPL
LTKKSKNDPNAPATNRIPMPELKDQDKLERVNAYREALKRVKMGPTSLPSICFYTFHNAI
QGITGIDISEDSSLMCTCFGDSNIKIWSLTPNKLRVMKQMDELELIDKDADDVLERMMDE
RTAEDCKMLTGHSGPVFNTSFSPDKSSLTSCSEDGTVRLWSLHTWTNLVSYKGHNTPVWD
VKFSPHGHYFVSGGHDRVARLWTTDHYQPVRIFAGHYADVDCVQFHPNGNYVATGSSDRA
VRIFDVLNGSCVRTLTGHKGAIHSLCFSPDGKYLASTGLDATICLWDISNGNMLAQMRDH
TNTVYSLCFSRCGSVLASGGLDNTVKLWDVTKVIKETDKDMDASIPSSLSVNESPNLLIG
SFATKATPVLNIHFTQKNLLLAAGPMKVS
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaagggcagtcagattatggaaaactttaaatcgagcaagtttgtgttaaagatgtct
cgagactcttacacccatttgaaacgtttccttcaagagaaacacatgaatgttctcctc
aacatcatacaagagcacatgtttattgatgtatttgatggcgtaccgcgaaccaaacat
cagattgatatgactagtggtggtctacttggggaggccgcgagagatgccaacaagact
aagatactacacggtctattgaaggagcctgacattaacatccccgtggacgatgatgat
gatgggggtggggacggtgaagataaacctaagaaaaagaagcagaaaaaagatccattg
cttacaaagaaatcaaagaatgacccaaacgcaccagctacaaaccggatacccatgcca
gaactgaaggaccaagataagctagagagagtgaatgcctacagagaggcccttaagagg
gtcaagatggggcccacctccctgccatccatctgcttctataccttccataatgcaata
cagggaatcactggtatagacatatcggaagactccagcctgatgtgtacatgtttcggt
gactcgaacatcaaaatctggtccctcactccgaacaaactgcgcgtcatgaaacaaatg
gacgagctggaactcattgacaaagatgctgatgatgtcttagaacgcatgatggatgaa
aggactgctgaagactgtaaaatgctgacaggtcacagtggcccagtgtttaacaccagc
ttctctcctgataaaagcagcctcacatcatgttctgaggatggcaccgttcgactctgg
agtctccatacgtggaccaatcttgtatcatataaaggccataatacccctgtctgggat
gtgaaatttagcccccatggtcactattttgtgtccggtggtcatgacagggtggccaga
ctgtggacaacagaccactaccagcctgtcaggatatttgctggacattacgctgatgtt
gattgcgtacagtttcatccgaatggaaactacgttgccacgggttccagtgatcgtgct
gtcaggatatttgatgtgctgaacgggtcctgtgttaggacacttactggtcataagggt
gcaatacacagcctatgtttctcgccagatggaaaatatctagcttcaacaggtctggat
gctaccatatgcctttgggacatttctaatgggaatatgttggcacaaatgagagaccat
actaacacagtgtattccctgtgttttagtagatgtggttcggtactggcttctgggggt
cttgacaacacggtgaagctgtgggacgtcactaaagtcatcaaggaaacagataaggac
atggatgccagcatacctagttcattgtctgtgaatgaatctcccaatctcctcatagga
tcgtttgcaacaaaggccactccagttctcaacattcattttacacagaaaaacctgctg
ctggcagctggacccatgaaagtatcatga
DBGET
integrated database retrieval system
