Mya arenaria (softshell): 128239804
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Entry
128239804 CDS
T09995
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1-like isoform X1
KO
K11650
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D
Organism
maea
Mya arenaria (softshell)
Pathway
maea03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
128239804
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
maea03021
]
128239804
03036 Chromosome and associated proteins [BR:
maea03036
]
128239804
Transcription machinery [BR:
maea03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
128239804
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
128239804
PBAF complex
128239804
GBAF(ncBAF) complex
128239804
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIB
YwpF
Motif
Other DBs
NCBI-GeneID:
128239804
NCBI-ProteinID:
XP_052812199
LinkDB
All DBs
Position
7:12510222..12604455
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AA seq
511 aa
AA seq
DB search
MQTPQRYPPPGAPMRSYPQSGYSPGPPRPGYSPAPGHPGMAPRMGMPVTPHGPGMSPMPY
GGQSSKSKDSGISRPGPGMPPPPMGMGTPSMERKRPADSRAAHMKAKKKKKLADKILPQR
VRDLVPESQAYMDLLAFERKLDATITRKRLDIQEALKRPMKQKRKLRIFISNTFYPSKPA
ENEGEEESVPSWELRVEGRLLEDAASAKLSDTGKMKRKFSSFFKSLVIELDKELYGPDNH
LVEWHRTTNTQETDGFQVKRPGDQNVRCTVLLMLDYQPSQFKLDPRLARLLGVHTQTRPV
IINALWQYVKTHKLQDPHEREFINCDRYLEQIFECKRMKFAEIPGKLHTLLMPPDPIVIN
HVITVEGPDARKTACYDIDVEVDDTLKQQMNSFLLSTQSQNEIASLDNKVSCHGNRPGKI
HETVETINQLKTNREFFLSFSKDPQEFINNWLISQTRDLKTMTDVTGNPEDERHSDYYAR
PWSQEAVCRYFYGKVQQRRMELETALGIRNT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgcaaactccacaaagataccctcctcctggtgcaccaatgcggtcctatccacagtca
ggatattcccctggcccacccaggcctggatacagccctgcaccgggtcacccaggaatg
gcccccaggatgggaatgccggtaacgccccatggtccaggaatgtcacccatgccatat
ggaggtcaaagttcaaaatccaaagactcaggaataagtcggcccgggccgggaatgcct
cccccgccaatgggaatgggaacacccagtatggagaggaaacgacctgctgactcgcgt
gcagcgcacatgaaggctaagaagaagaagaagctggctgataaaatacttcctcagagg
gtacgtgacctggttccggagtcccaggcctacatggacctacttgcgtttgagaggaag
ttggacgcaaccatcacgaggaaacgccttgacatccaggaagcgttaaaacggccaatg
aagcaaaagagaaagttgcgtatcttcatctcaaacacgttttacccgtcaaagcctgcg
gaaaacgagggtgaggaggagtcagtgccatcgtgggaactgagggtcgaaggtcgacta
ctggaagacgctgcaagtgcaaagctgagcgatactggaaagatgaagagaaagttttct
tccttcttcaaaagccttgtgattgagctggacaaggagctgtatggtcccgacaaccat
cttgtagagtggcatcgcactacaaacacccaggaaacagatggattccaggtgaaacgt
cctggtgaccagaatgtccgatgtacagtgctgctgatgctggattatcagccatcacag
tttaaactggaccctcgtctcgcgcgcttgcttggcgtccacacacagacacgtcccgtc
atcatcaatgcgctctggcagtatgtgaagacacacaaattacaggacccgcacgaacga
gagttcatcaactgtgacagatatttggaacagatcttcgagtgtaaacgtatgaagttt
gccgaaattcccggaaagctacacacgttactcatgccacctgacccgatcgtcatcaac
catgtgataaccgtcgagggtccagatgctaggaagacggcctgttacgacattgatgta
gaagtggatgacacattgaagcagcagatgaactccttcctgctctcaacacagagtcag
aacgagattgcttcccttgataacaaggtatcatgccatggcaaccgtcctggcaaaatc
catgagacagttgagacgatcaaccagctgaagacaaaccgagaattcttcctgagtttc
tctaaggacccacaggagttcatcaacaactggctcatctcacagaccagggatcttaag
acgatgacggatgtcacaggtaatccggaagatgaacgtcactcggactattacgcccga
ccgtggtcccaggaggccgtgtgcagatacttctacggaaaggtgcagcagcgcagaatg
gaattggagactgctctgggtatccgcaacacataa
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