Mya arenaria (softshell): 128240144
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Entry
128240144 CDS
T09995
Name
(RefSeq) P-granule-associated novel protein 1-like
KO
K05401
toll-like receptor 3
Organism
maea
Mya arenaria (softshell)
Pathway
maea04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
128240144
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
maea04054
]
128240144
04090 CD molecules [BR:
maea04090
]
128240144
Pattern recognition receptors [BR:
maea04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
128240144
CD molecules [BR:
maea04090
]
Proteins
128240144
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR_2
LRR_4
TIR
ThsB_TIR
Orf78
YajC
Psg1
Motif
Other DBs
NCBI-GeneID:
128240144
NCBI-ProteinID:
XP_052812626
LinkDB
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Position
7:complement(53919754..53923993)
Genome browser
AA seq
733 aa
AA seq
DB search
MNMVVLKLTLWTLFGLIFSTTSATYCPKQCECQERVILCGDIPISDVSLKIGSTEVHLTN
LDANRLFVEVFMKNALWTQMQSLDITCAGQQKLYNRVFMGLGNLTKLGFHNENLFHMGND
VFQGLDSLKELNFSGQKRLFLIDILPSLRNSDLVYLERVTLSYIQKSYAETLELGFDFFR
SLSGSGKRNIKYIDLSHVNIGILDFASFVHAGLCRSFEEFILRYNHFKNFYNSIVPTCEN
FKILDISHSLLPNLFDFLLKDIDFFCQAMSFYYNIEEIYMDSMVMSVPIRETSELHFQDC
PLRLRKVSLANNRLELINISVSDISNMMKKSLSWIDVSGNQIEYLSPRFFSPSVNLKHIN
LSKNNLGKMQTLHNHDFETFLMNNNELRFLGLAGNNIDKLPLLTLQNKGKLVKLDLSDNR
LVDLNFNVDDLRSIQTLNLSNNLMESLSAVLMHKFDLMSTANGSMRHLDISGNPFVCSCD
DEHRESIEWIRKRNGTLIDGYLYACLLNGKEITFLENKDYATVLHYCKIQKMKAIVAVVV
SLLVVFVVVFVAAFLLVKRKSRRQLERQRLFDSIKLGQFRKKNLVFLSFCSEDADLVEGK
IRPRVIEGLRELTQYSGELVCSGDLSFRPGFQIGEEIIRCIEDSAVTIIVVSNSFCTKQW
CKREVQESYDQNNPMIILLVEHVEPNVMGKVLMKLFKRFAHASWIADDDGGHIEPNWSIL
CQSIIDLATRSDY
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaatatggttgtgctaaagttaactttgtggacattatttggattgatattttcgaca
acatcagccacgtattgcccaaaacaatgtgaatgccaagaacgtgtgatattgtgtggg
gatattcctatttcagacgtttccctgaaaataggctcgacggaggtccatctgaccaat
ctagatgcgaatcggctgtttgtggaggttttcatgaagaatgccctatggacacaaatg
caatcactggatataacatgcgccggtcaacaaaagctatataaccgcgtttttatgggt
ttagggaatctcacaaaactaggttttcataatgagaatttatttcacatgggaaacgat
gttttccaaggattagattctctaaaggagttgaatttctctgggcaaaaacgcctgttc
ctgattgatatattgccaagtttaagaaactcggacttagtctatcttgaaagggtaaca
ttgtcatacatacaaaaatcttacgcagaaacattagaacttggatttgacttctttagg
agcttgagcggaagtggaaaaagaaatataaagtatatcgatttatcccacgtgaacatt
ggtatacttgattttgcttcatttgtccatgctgggttgtgccgctcgtttgaagaattt
attttacggtataatcatttcaaaaacttttacaatagtatagttcctacgtgtgaaaat
tttaaaatcttggacatcagccattcattactcccaaatttgtttgacttccttcttaaa
gacatagacttcttttgtcaggcgatgagcttctattataatatagaagagatatacatg
gattccatggtaatgtctgttcctatcagggagacatcggaacttcattttcaagactgt
cctttgcggcttcgaaaggtgtctttagctaacaatcggttagagctcattaacatttct
gtctctgatataagtaatatgatgaaaaaaagtttaagctggattgacgtatccgggaac
cagattgaatatttatcaccaagattcttttctccatcagtaaacttaaaacatatcaac
ctctcgaaaaacaacctgggaaaaatgcagacgttacataaccacgactttgaaaccttt
ttaatgaacaacaatgaacttcgttttcttggcttagctggaaacaacattgacaagttg
ccattgcttacgctacaaaataaaggcaaactagtaaagctggacttgtcagacaacaga
ttggtggatttgaacttcaatgtagatgatcttaggagtatacaaacacttaatctaagt
aacaacttgatggaatcattaagcgcagttttaatgcataaatttgatctaatgtctaca
gcaaacggatctatgcgtcatcttgatatatctggtaacccatttgtgtgctcatgtgat
gacgaacatagggaatcgattgaatggatcagaaaacgaaatggaacattaatcgatggt
tatttgtatgcctgtctcctaaatgggaaagaaataacctttctagaaaacaaggactac
gcgactgtgttacactattgcaagatacaaaaaatgaaggccatcgtcgctgtagttgtt
tcattacttgttgtttttgtggttgtgtttgttgccgcgtttcttctcgttaaaagaaaa
agtcggagacagttggaaagacaaagattatttgacagcattaaattgggtcaattccga
aaaaagaatcttgttttcttgtctttttgttcagaagacgccgacttggttgaaggcaaa
atacgacccagggttatagaaggtcttcgggaattgacacaatatagtggtgagttggtg
tgctcaggcgatctcagttttagacccggattccaaattggggaagaaataataagatgc
atcgaggactctgccgttacaataattgtggtgtctaattcattttgcactaaacagtgg
tgcaaaagggaggttcaggagtcatacgatcagaacaaccctatgattattctacttgtt
gaacatgtggagccaaacgtgatgggtaaagttctcatgaagttgtttaaacggtttgcg
catgcgtcatggattgctgacgatgatggaggtcacattgaaccgaattggtccattctt
tgccagtcaattattgaccttgctacacgaagtgactactaa
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