Mya arenaria (softshell): 128240362
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Entry
128240362 CDS
T09995
Name
(RefSeq) DNA topoisomerase 2-alpha-like isoform X1
KO
K03164
DNA topoisomerase II [EC:
5.6.2.2
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maea03032
]
128240362
03036 Chromosome and associated proteins [BR:
maea03036
]
128240362
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
128240362
DNA replication proteins [BR:
maea03032
]
Eukaryotic type
DNA Topoisomerases
128240362
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Chromosome condensation proteins
Other regulators of chromosome condensation
128240362
Centrosome formation proteins
Centriole proteins
128240362
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
TOPRIM_C
DNA_gyraseB
Toprim
HATPase_c
DTHCT
Motif
Other DBs
NCBI-GeneID:
128240362
NCBI-ProteinID:
XP_052812945
LinkDB
All DBs
Position
7:complement(23975687..24007618)
Genome browser
AA seq
1735 aa
AA seq
DB search
MRLFTRALANTFKFVNRSRSKKFGCVNALQSRINQLDLQFSREMASSGPLKTLFDKMNKG
DGEAVAVKSKPKSAAKENMDEFFVPGGDDDHGGKPKKKKMSIERIYQKKSQLEHILLRPD
TYIGSVESVTQPMWVLNDDHTMMVQRDITYVPGLYKIFDEILVNASDNRQRDPTMNCIKI
DIDPESNKVRIWNNGRGIPVVEHKEHKMFVPTMIFGHLLTSSNYDDTEKKVTGGRNGYGA
KLCNIFSNKFIVETSYKEYGKSFKQTWTDNMGNTKSPTINDSKDSDFTAITFYPDLTKFG
MTTLDKDIVDLFTRRAFDIAAAGKNVKVMLNGKRVPVKSFKDYVDLYVKDKIDDNGAPLK
VVHDVVNERWEVAVCLSDKGFQQASFVNSIATTKGGRHVDHVAEQVVKKLMDTISKKNKG
GVAIKPFQVKNHMWVFVNCLIENPSFDSQTKENMTLQAKSFGSKCSLTDKFIQQVSKCGI
VESITSWMKFKAQAQLNKKVGGSKTNKLKGIPKLDDANDAGTKFSRDCTLILTEGDSAKT
LAVAGLGVVGRDKYGVFPLRGKVLNVREASHKQILENAEINNVVKIMGLQFKQKYEDEDS
LKTLRYGKLMIMTDQDHDGSHIKGLLINFMQHFWPNLLKWNIINQFITPIVKVTKGKEEV
AFYSLPEFEEWKSETSNWNTWKIKYYKGLGTSTSKEAKEYFSDMVRHKIDFKYSGTEDDA
AINLAFNKKKTEERKEWLSTWMEEKKQRTEMGLPQHYLYGKNTRCVSFNDFINRELILFS
NSDLVRSIPSLVDGLKPGQRKVLFTCFKRNLVNKEIKVAQLAGSVAEMSAYHHGEVSLMN
TIINLAQNFVGSNNINLLMPIGQFGTRLHGGKDASSPRYIFTMLSPVARNLFNVNDEALL
EQQYDDNLRIEPEWYCPIIPMVLVNGAQGIGTGWSTSIPNYDVREIVANVKRLLDGDETE
PMLPNYKNFKGSIVQLIENKYVVNGEVSVIDDNTVEITELPVKKWTQDYKEDVLEPMLNG
TDKVPALITDYKEYNTDSTVKFVVKMTTENLAKSEEAGLHKVFKLQNTITSNSMVLFDHN
GCIKRYNSVDEILREFFDLRMDLYKKRKDYLEGMMAAESLKYDNIARFILEKIEGTLTIE
NKKKKDLIEMLVRRGYDSDPVKAWKEVQNKGKAIENDLNDAKEDTEEESGPDYNYILGMP
LWNLTKEKKDELLNKKEAKAKELSALRRKSPGDLWKDDLEQFLEELDKVETKEREDDNAG
QAIKAKPAKGKRPRPVKVEVLPSPYGRRVEPKYDSIKKKADAVKRGKDRKDAAAKNGKIL
DFMKMEDDEESNNEPLSLADRMKIKGSPVDIMRKAPAEKKSKAPKEPKAPKAAKEPKQKR
SPKGSPKKGGKKRNPWSESEEEDSNISDLSDNDNDGSFLGTYIPREGPRRAAAQKIKFNE
LDSEDEDEFEEMDQSNDKAPEILDKSDNDDDDDFGATKAKSNDDNKPFKRKAVIDSDSDF
GPGSDHEVSTGDKDDEWLKITGQQQNTTSQSTASSARSTASSDKSNDLVAFDISDDDDDD
DAPKEELFKTTKPLKKPAGEKKPAAKKPAGEKKPRAPAKKKTEKKDTKQPSIATAMAKSS
AAQSKKKPLVVSDSDDSDVDFPAKSSAAREVPKEKKAPAAKKPAKKRAIVDDSDISDLSE
EEIKPKKSKASKKQKTSDDEFDIDLDEVIPAPTRGGGRSRAPVTYNFDDSDSDFD
NT seq
5208 nt
NT seq
+upstream
nt +downstream
nt
atgagattgtttacaagggctcttgcaaacacatttaaatttgtaaatcggagtcgaagt
aaaaagtttggatgtgtgaacgcattacagagtaggataaatcagttagatttgcagttt
tcgagagaaatggcgtcttctgggccattgaagaccttatttgacaagatgaataaaggt
gacggagaagcagtggctgtcaaatcaaaaccaaaatcagctgccaaagaaaacatggat
gaattctttgtgccgggaggagatgatgaccatggggggaagccaaagaaaaagaagatg
tccatcgagagaatataccagaaaaaatcccagctagagcacattcttcttagacctgat
acatacatcggctccgttgaatctgtgacacaaccaatgtgggtgttaaatgatgaccat
accatgatggtgcagagggacattacctacgtgcctggactctacaagatctttgatgaa
atacttgtgaatgcctcagacaacagacagcgagatccaactatgaactgcatcaagatt
gacatcgacccggagagtaacaaggttcggatctggaacaatgggcgaggtattccagtc
gttgaacacaaggaacataaaatgttcgtgccaacgatgatcttcgggcatctgctgaca
tcaagtaactacgatgacacggagaagaaagtcaccggtggccgcaatggttatggtgcc
aagctgtgcaatatcttcagtaacaagttcattgttgagacttcttataaggaatacggg
aagtctttcaaacagacatggactgacaacatgggtaatactaaaagccccaccatcaac
gactccaaagatagcgatttcaccgccatcacattttaccctgatctgaccaagtttggc
atgactactctggataaagacatcgttgacctgttcacaaggcgagcctttgatatagca
gctgcgggaaagaacgtcaaagtcatgttaaatgggaagagagttccagtaaaatccttc
aaggattatgtggacttgtatgtcaaagacaaaattgacgacaacggagcgcccctcaag
gtcgttcacgatgttgttaatgaacgctgggaggtggctgtgtgtctcagtgataaagga
ttccaacaggccagctttgtgaacagcattgctaccaccaagggtggccgacatgttgac
catgtagcagaacaagtggtcaagaaactgatggacacaatctccaagaagaacaaggga
ggtgtggctatcaaaccatttcaggtgaagaaccacatgtgggtgtttgtgaactgcctg
atcgaaaacccgtcctttgactcacagacaaaggaaaacatgacattacaggcaaaatcc
tttggctccaaatgcagtctcactgataaattcattcaacaggtcagcaaatgtggcatc
gtagagagtatcacatcttggatgaagttcaaagcccaggcccagctgaataaaaaagtg
ggtggatccaaaacaaataaactcaagggcatccccaaactggatgatgccaatgatgct
gggaccaaattctctcgtgattgcacactcatcttgactgagggagattcagccaagacc
ttggctgtggctggtcttggagtggtgggtagagacaaatatggtgtgttcccactgaga
ggtaaagtgctgaacgtgcgggaagcctcacacaaacagatccttgaaaacgctgagatc
aacaatgttgtcaagatcatgggccttcagttcaagcagaaatacgaggacgaagactcc
ctgaagaccctgagatatggcaaactgatgatcatgactgatcaggatcacgacggctct
cacatcaagggcctactcatcaacttcatgcagcatttctggcccaacctgctcaagtgg
aacattatcaaccagtttatcacccccattgtgaaggtaaccaaagggaaagaggaggtt
gccttctacagcttgccggagtttgaggagtggaaaagtgagaccagcaactggaataca
tggaagataaagtactacaaaggtcttggtaccagcacctcaaaagaggcaaaagagtac
ttcagtgacatggtgcgacacaagattgatttcaaatacagcgggacagaagatgacgct
gccatcaacctggcctttaacaagaagaaaactgaggagaggaaagaatggctgtccact
tggatggaagagaaaaaacaaaggacggagatggggctgccccagcattacttgtatggg
aagaacacacgctgtgtctcgttcaacgacttcatcaaccgtgaactcatcttgttctca
aactctgatcttgttcgctcaatcccgtcactcgtggacggcctgaaaccaggccagcgc
aaagtgctgttcacgtgtttcaagaggaaccttgtcaataaagagataaaggttgcgcag
cttgctggttctgtggcggagatgtcggcctaccaccacggtgaggtttccctgatgaac
acgatcatcaacttggcccaaaactttgttggcagcaacaacatcaacctgctgatgccc
atcggacagtttggcacgagacttcacggcggcaaagatgcctccagccccagatatatc
ttcacaatgctcagccccgtagcgagaaacttgtttaatgttaatgacgaagctctgctg
gaacagcagtacgacgataatctccggattgagccggagtggtattgtcccatcataccc
atggttcttgtaaatggggctcagggtattggtacaggctggagcacgtccattccgaat
tacgacgtgcgggagatcgtggcgaacgtgaagcgcctgttggacggggacgagacagag
ccaatgttgccaaactacaagaacttcaaaggctctattgttcaactgatcgagaacaaa
tatgttgtgaatggagaagtgtcggtgatagacgacaatactgtggagattactgagctt
cccgtgaagaagtggactcaggattataaggaagatgtcctggaaccaatgctgaacggt
actgacaaggtgccagctcttatcactgattacaaggagtacaacacagactcgacggtg
aagtttgttgtgaagatgaccacagagaacctcgccaagtcagaggaagcgggtctacac
aaggtgttcaaactgcagaatacaatcacctccaactctatggtgctgtttgaccacaac
ggctgcatcaagagatacaattctgtggacgagatcctacgtgagttcttcgacttgcgt
atggatttgtacaagaagcgtaaagattacctggaaggtatgatggcggcggaatcgctc
aagtatgacaacatcgctcgcttcatcctggagaagattgaagggacgctgactattgag
aacaagaagaagaaggatctgattgagatgttggtgcgccgtggttacgactccgaccct
gttaaagcatggaaagaggttcaaaacaagggcaaggcaatagagaatgacctgaacgac
gctaaggaagacacggaggaggagagtggaccagactacaattacattcttggcatgccc
ctctggaacctgacgaaggagaagaaggacgagctgctcaacaagaaggaagcgaaagct
aaggagctgtcagccctgcggaggaaatcacccggagatctgtggaaagatgacctggaa
caatttttagaggagttggataaagtggaaactaaagagagagaggatgataatgccgga
caagccatcaaagccaagcctgccaaaggcaagcgaccaagaccagtaaaggttgaagtg
cttccctccccgtacgggcgacgtgtggagcccaagtacgactccatcaagaagaaggca
gatgctgttaagaggggaaaggatcgcaaagatgctgctgccaagaacggaaagatcctt
gacttcatgaagatggaggacgatgaagagagcaacaacgaacccctgtcattggccgat
cgcatgaaaattaaggggagcccagtggacatcatgagaaaggcaccagctgagaaaaaa
tcaaaagccccaaaagagcccaaggcacctaaagctgcaaaagaacccaaacagaagaga
tcaccaaaaggctcaccaaagaaaggtggaaagaagaggaacccatggtcagaatcagaa
gaagaggatagcaatataagcgacctttcagacaatgacaacgatggcagcttcctcgga
acatacattccacgagaaggtccaaggagagccgcggcccaaaaaatcaaattcaatgaa
cttgacagtgaagatgaggatgaatttgaagaaatggatcaaagtaacgacaaagcgcca
gaaattctagacaaaagtgacaatgatgatgatgatgattttggagctacgaaagctaag
tccaatgatgacaacaaacctttcaagcggaaagcggtcatagattctgattctgatttt
gggccagggagcgatcatgaagtttcgacaggggataaagatgatgaatggttgaaaatc
accggacagcagcagaataccacatcacagagtacagcctccagtgcccgtagtacagcc
tccagtgataagtcaaatgaccttgttgcctttgacatcagtgatgatgatgatgatgat
gatgctccgaaggaagagctgtttaagacaacaaaaccccttaagaaaccagcgggcgag
aaaaagcccgctgccaaaaaacctgcaggtgaaaagaagccccgtgctcctgctaaaaag
aagacagaaaagaaagacacgaagcaaccttcaatagccactgctatggctaaatccagc
gctgctcaaagcaagaaaaaacctcttgtagtcagtgattcagatgattcagatgttgat
tttcctgctaaaagttccgctgcccgagaagtgcctaaagagaagaaagcccccgccgcc
aagaagccagctaagaagcgtgccattgtggatgattctgacatctctgatcttagtgaa
gaagagattaagccgaagaaatcaaaagcttctaagaaacagaagacgagcgatgacgag
tttgatattgatcttgacgaggtcatcccggcaccgaccagagggggtggccgatctagg
gcacctgtcacatacaactttgacgactcagattccgactttgattga
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integrated database retrieval system
