Mya arenaria (softshell): 128240518
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Entry
128240518 CDS
T09995
Name
(RefSeq) sodium- and chloride-dependent GABA transporter ine-like
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
maea
Mya arenaria (softshell)
Pathway
maea04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
128240518
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
maea02000
]
128240518
Transporters [BR:
maea02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
128240518
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
128240518
NCBI-ProteinID:
XP_052813136
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Position
7:complement(5640807..5663266)
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AA seq
608 aa
AA seq
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MDVAPWNLLQIAFIVVWPAWTSFTKMPNGMSLLAAYLFLLVLCIPPVFIQLKLGNHQQKG
IVSLLSTHVPILKGIGITLLIQLFLMCVFMAPLVTHYGMYAFIAIAKNPYVWTSCANVWN
TASCFQNPTDLLGTMLTSGQKHNVPPSLIPAESEFFDNEYLQISGNISDVRGFAVWGFSD
EVNKAGVSVLPLAMVGVWVFIFLGLAFGARVCGLILFILGPGFLALMFTVLGYGYSHLES
NGTNTFLGVLYTLDMTQFHQLHDENTPLIQDWLDGFSLVTHSVPVWTAILPTMGKMTGQG
RLSRNISWIFVILVYAATCQLPQLAMAPYIGNLQHIVPSYMYNIKGLDVIFTTMPAAFSH
LGIPSVYALLFYLSIFLAGLMFLIVSMFTILDNLVDGLVAWSETFQERRACINFCAAFAL
ISVGIGASILHTTQAGLYYIIVMDQCVPKLFFLTVALYGLTLIIIYAKQNFGIAERVVMS
VWCGVSTLITAAIFLYQFITELEDIPRYHEMEIKGLWDLVCWIFASAPFLAIPAAMIHAC
QSEDGTCVERIKFVFCGIKQDPYSPPEEYGYRHPDPSAPPYGGIDHPTYTYMDQDGYPME
DLSCYKSD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggatgtggcaccttggaacctgctacagatagcattcatcgttgtctggccagcatgg
acgtcctttaccaagatgcccaatggcatgtccctgttggcagcctaccttttcctgttg
gtgctgtgtatcccgcccgtgttcatacagttgaaactgggcaaccatcaacagaagggg
attgtgtctctcctctctacacatgtaccaatactgaagggtattggtataacgttactc
atacagctgttccttatgtgtgtgtttatggcccctcttgtgacccactacggaatgtac
gctttcatcgccatagcgaaaaacccctacgtgtggactagctgtgctaatgtatggaac
acagcctcatgttttcaaaatccaacagatttgcttggtacaatgttaacctctgggcag
aagcataatgtgccaccatcactaattcctgcagagtcagaattctttgataatgagtac
ctccagatctctggcaacatttctgatgtgcgtggctttgcggtatggggtttctcggac
gaggtgaacaaggcgggagtgtcagtgttgcccttagcaatggttggcgtgtgggtgttc
atcttcctagggcttgcatttggggcacgggtgtgcggtttgatcctgttcatcctgggc
ccaggttttctggccctgatgttcaccgtgctgggatacggctacagtcacctggagtct
aatgggacgaacacattcctgggagtattgtataccttggatatgactcagttccatcag
ctgcatgatgagaacacgcctctcattcaggactggctagacgggttctccctggtgacc
cactctgttcctgtctggacggccatactgccaacaatggggaaaatgactggtcaaggg
cgcctcagtagaaatatatcttggatatttgtgatcctggtatatgctgccacatgtcag
ctaccccagctcgccatggctccctacattggcaatctacaacacattgtgcccagctac
atgtacaacattaaaggtctggatgtgatattcacgaccatgccagcagcgttttctcac
ctgggcataccctctgtctacgctctcttattctacctgtccatattccttgcgggtctc
atgttcttgatagtttccatgtttacaatactggacaacctcgtggacggcctcgtggca
tggagtgaaacgttccaagaaaggcgggcctgtatcaacttctgtgcagcgtttgctctt
atatccgtgggcattggggcatctattcttcatacgacgcaggctgggttatactacatc
atagtgatggaccagtgcgtaccaaagctgtttttcctcaccgtggccctgtatggactc
acccttatcatcatttatgcaaagcagaactttggcatcgcagagcgggttgtgatgtcg
gtgtggtgtggagtgtctacgctcattacagccgccatattcttgtaccagtttattact
gagttggaagacattccccgctaccacgagatggagatcaaaggcctgtgggacttggtg
tgttggatattcgccagtgccccgtttctcgccatacctgcagccatgatccacgcctgt
cagtcagaggacggcacatgtgtagagcgaatcaagtttgtattttgtggcatcaagcaa
gacccctatagcccgccagaagagtacggctaccgccaccccgaccccagcgctccaccc
tatggaggaatagaccatcccacatacacatacatggaccaagatggctacccgatggag
gatttatcatgttacaagtcagactga
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