Mya arenaria (softshell): 128240553
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Entry
128240553 CDS
T09995
Name
(RefSeq) bifunctional 3'-5' exonuclease/ATP-dependent helicase WRN-like isoform X1
KO
K10900
werner syndrome ATP-dependent helicase [EC:
5.6.2.4
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
maea03032
]
128240553
03400 DNA repair and recombination proteins [BR:
maea03400
]
128240553
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128240553
DNA replication proteins [BR:
maea03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
128240553
DNA repair and recombination proteins [BR:
maea03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
128240553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
HTH_40
RQC
HRDC
RecQ_Zn_bind
ResIII
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
128240553
NCBI-ProteinID:
XP_052813188
LinkDB
All DBs
Position
1:62490016..62521719
Genome browser
AA seq
1208 aa
AA seq
DB search
MNDTLEDSGCCQHLISAIKTVGISLKNCVHKGLTNDQFDYISAQLNGAEDCLKDVREEFK
RTFQLTLDKKLNADKNDEESDVTVDLTDDHDDLDESDDVVNVKKPLVDVKKMEEDRDSDD
TDDLENFDDFNVDDVIQSTPVSDKLKQKSVTNLGCSRVIKTEQDPDRRKSEDLFETPNSS
QHDQPYKSDDNKIAPRKAGDIGVKSEVDCKDVKENGKEKPDMSAYKEYFDAVLGDTDDFD
DDDFGEEDFQELDAAEKSYTNDTGSNHTSPDHTPPDVQVIEDDDEDAENQPQDKKYLQVL
KQYFGYSKFRPMQWKILHSIMLDKRDNCVIMATGYGKSLCYQFPSLMTGRTTVVISPLIS
LMQDQVLSLQAANIPSCLLGSAQEKTREVTDNLMRGEYRVLYITPEFATVGTDVLSRLDD
CVGIDLIAIDEAHCVSQWGHDFRDAYRQLGKLRALFPNVPIMALTATATPEVRLDICRSL
KLKNPMVTCSGFDRPNLFLTVNQKCGDVKHDLTTRMEQDGNKHRFPGPTIIYCPTKKDTD
MVANVVKGMKVPCLPYHAGLTPKARKEAHKKFVNDEIQVVVATVAFGMGIDKPDCRMVIH
YGAPKDIESYYQEVGRAGRDGLPSECHTFYTNKDFNTARFLLKDIQNVKFKQHKLNMLTK
MTQYLSASTCRRRILLSHFDSKNLEQVGGTANCCDNCRKNIENSRQKSYYDSKNWSSVVS
GVTSKTEPRDYGKEAATFFSVVKALNGGFGLTITVLVLMGSSSQKVKRWTNNKIFGIGSY
RKAAWWKALGHCLVEQGYLEEVACGQGLFGSTINVTEKAIDWMDHGGHTGSRDLKFVPNA
ELAAEDKPAVTVAIRPSIPSVNPPSRPGLYKSHTSLISASKVMPDPVAAIRAAAFTPQKP
AVDERTAKLEADLYTLLIRRRNELAQQTGFTPHSIASNKVLLDMAKIRPTTKPDLLRLED
FPEAKVERFGASLVEVVAEFCASNDLSTNNFPNINISKSGSELQAEIYNLTETQRTSYIM
FAVQKNSLEEVASRRGFKTSTIMSHMAEAIKVGLPVEIERVGVTPNIQALVTRAVRGQVI
NSEISRLTKIKDELPEYVEYNHIKIVLALLVRKYGQRVLPTGEVYLEGSQSTDMGSQSQG
SIDLEVNIDSQNSQREKQSKVNSENPFMAGSSPAADNTQGTKRKLPVWMSSGSQPKLTKK
MKSNSLFR
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacacactagaggacagtggctgctgtcagcacttgatttcagccataaaaact
gttggcatatctctcaaaaactgtgttcataaaggactaactaacgatcaatttgattac
atatcagctcagttgaacggtgcagaagactgtttaaaagatgtgcgagaagagttcaag
aggacatttcaattgactttggataaaaaattgaatgcagataaaaacgatgaagaatca
gatgtcaccgttgatctcacagatgatcatgacgatcttgatgagagtgacgatgttgta
aatgttaagaaaccattggtagatgtaaaaaagatggaagaggacagagattcggacgat
actgatgacctggaaaactttgatgacttcaatgtggatgatgtgatacagtctactcca
gtcagtgacaaattaaagcagaagtctgtaacaaaccttgggtgttctagagttataaaa
actgagcaagatccagatagacgtaaaagtgaagatctctttgaaacacccaatagctca
caacatgatcagccttataagtctgacgataacaaaattgctccaagaaaagcaggtgat
attggtgttaaatcggaagttgactgcaaggatgtaaaggaaaatggtaaagaaaagcct
gatatgtcagcttataaagagtactttgatgctgtgttgggagacactgatgacttcgat
gatgatgactttggagaggaagatttccaggagcttgacgctgcagagaaaagttacacc
aatgacacgggcagcaaccacacatctcccgaccacacccctcctgatgttcaggtcata
gaggatgatgatgaagatgcggagaaccagccccaagacaagaagtacctccaggttctc
aaacaatactttggttactccaagtttagaccgatgcagtggaagattctacactccata
atgctggacaaacgggacaactgtgtcatcatggccacaggatatggtaagagcctgtgt
taccagtttccctcgctgatgacggggcgaaccactgtggttatctcaccattaatttca
cttatgcaggaccaggtcctctcactacaagcagcgaatattccttcatgtttactgggg
tcagcccaggagaaaacgagggaggtcactgacaatctcatgaggggagagtaccgtgtg
ttatacatcaccccggagtttgcgacggttggtacggacgttctatcccgactggatgac
tgtgtcggtatcgatctgattgccattgacgaagctcattgtgtgtcacagtgggggcat
gacttccgtgacgcctaccgccagctcgggaaactgcgggcattgttccctaatgttcca
atcatggcgcttacagctacagccacacccgaggttcgattggacatctgtagaagtctt
aagctgaaaaaccccatggtcacatgttctggatttgacagacccaacctgtttctgaca
gtgaaccagaagtgtggtgacgtgaagcacgacctgacaacacgtatggaacaagacggg
aacaagcacaggtttcctgggcccaccatcatctactgccctacgaagaaagacactgac
atggtggccaatgtcgttaaaggtatgaaggtgccctgcctgccctaccacgcgggactg
accccaaaagctcgaaaagaggcgcacaagaagtttgtcaatgacgagatacaggttgtc
gtggcaacagtggctttcggtatgggcatcgacaaaccagactgtaggatggtcattcac
tacggagccccaaaggacattgagtcgtactatcaggaggttgggcgggcagggagggat
ggtttgcctagtgagtgccataccttctacaccaacaaggacttcaacactgccaggttt
ctgctgaaggacatccagaatgtgaagttcaagcaacacaagttgaacatgctcaccaaa
atgacccagtatctgagtgcctccacgtgcaggagacggatcctgctgtctcattttgac
agtaaaaacttggagcaggtcggaggcaccgccaactgctgtgataactgcaggaaaaat
atagagaatagtcgacagaagagctattatgactccaagaattggtcatccgtcgtgtcc
ggtgttacatcaaagacagaacctcgggactatggaaaggaggcggcgaccttcttctca
gttgtcaaggccttaaatggagggtttggactgaccatcacggtgcttgtactgatggga
tcctccagccagaaggtgaaacgatggaccaacaataagatctttggcattggaagttac
aggaaggccgcatggtggaaggcactgggtcactgtcttgtggaacagggatatcttgag
gaggttgcgtgtggccagggtctattcggttccactatcaatgtcacagagaaggctatt
gattggatggaccatggaggacatacagggagccgggatctcaagtttgtacccaacgcg
gaactagctgctgaggataaacctgctgtcactgtcgccatcagaccaagtattccaagt
gtaaatccaccgtctcgccccgggctttacaagagccacacctccctgatctcagcctct
aaagtcatgcctgaccctgtcgccgccatccgggcagctgccttcaccccacagaaacct
gctgtcgatgaacgcactgccaaactggaggcagacctgtatactcttttaatcaggcgt
agaaacgaactcgctcaacagacaggcttcaccccacattccattgccagcaataaagtt
ctattggacatggcaaaaataaggccgaccaccaagcctgacctgctgcggctggaggat
ttccccgaagctaaggtggagaggtttggggcatcactggtcgaggtggtggccgagttc
tgtgccagtaatgacctttcaaccaacaacttcccaaacatcaacatcagcaagtcaggg
agtgaacttcaggccgagatctacaacctgactgagacacagaggacgtcctacatcatg
tttgcagtgcagaaaaattccctggaggaggttgcttcccgtcggggttttaagacgtcc
acgatcatgtcacacatggccgaggctatcaaggtcggcttgcccgtggagatagagaga
gtcggggtcacacccaacatacaggctctcgttacaagggctgtcaggggacaagttata
aactcagagattagtcgtttaacgaagatcaaggacgagttgccggagtatgtcgagtac
aaccacatcaagattgtgctggccctgctggtgcgcaagtacggacagcgggtccttccc
acgggggaggtatacctggaaggcagccagtctacagacatgggatcacagtcccaggga
tccattgacttagaagtaaacattgatagccagaactcacaacgtgagaagcagtccaag
gtaaattccgagaatccctttatggccggttccagtcctgctgctgataatacacaggga
accaagcgcaaacttcctgtctggatgtcatcgggtagtcaaccgaagcttaccaaaaaa
atgaagtcaaacagcttgtttagatag
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integrated database retrieval system
