Mya arenaria (softshell): 128241702
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Entry
128241702 CDS
T09995
Name
(RefSeq) putative nuclease HARBI1
KO
K23222
nuclease HARBI1 [EC:3.1.-.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
maea03036
]
128241702
Chromosome and associated proteins [BR:
maea03036
]
Eukaryotic type
Gene silencing
Transposable elements
128241702
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DDE_Tnp_4
Plant_tran
DDE_Tnp_1
HTH_Tnp_4
DDE_Tnp_1_2
Bac_DnaA_C
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
128241702
NCBI-ProteinID:
XP_052814703
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Position
7:323171..326120
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AA seq
338 aa
AA seq
DB search
MADLDIVNARRPRQFRRIDRQTDEDNDEEVRKRYRFTPHNIDRLERLIGHRLERPTRRNQ
PLTPRQQIMIALRFYATGNFLQVIGDTFGVDVATVSRVVTAVTDCIFDMKDSAIQFSTTD
RHRHRTKTGFHAIRGFPSVISAVDGTHVRIQTPSDDEEQYVNRKHFHSINVQASCDHRGI
FNCINAIWPGSTHDAHVFRTSELFHFMETHHHGLEDGILLGDSAYPCKPYMLTPYLHPAN
EAQQHFNDAHCSTRNVIERAFGVLKRRFHILHTEIRMKPLKVSKIVVCCVVLHNLAKLWG
EPEEFPPEDDQQPPTVLNHDDDMSGKAVREYITMQYFS
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggccgaccttgacatagtgaacgctaggcgacctcgacaatttcgcaggatagataga
caaacggacgaagacaacgacgaggaagtacgtaaacggtatagattcactccgcacaac
atagacagattggaacgactgataggccacagacttgagcgaccgactcgcagaaatcaa
cccttgacaccacggcaacagattatgattgctttacgtttttacgccactgggaatttt
ttacaagtaataggggatacatttggggtagatgttgccacggtttcaagggttgtaact
gcagtgaccgactgtatttttgacatgaaggacagcgcgattcaattttcgacgacagac
agacatagacacaggactaagactggatttcatgccataaggggattcccgtctgtgata
tcagcggtagacggaacgcacgtaagaatacaaacgcccagtgatgacgaggagcagtat
gtcaatagaaaacattttcacagcattaacgtgcaagccagctgcgaccatagaggtatt
ttcaactgcataaatgccatctggccgggcagtacgcacgatgcccatgtatttaggacc
tcggaattgttccacttcatggaaacacatcatcatggccttgaagatggcatactgcta
ggggacagtgcctacccttgcaagccttacatgctcaccccatacctgcacccagcaaat
gaagcacagcaacatttcaatgatgcgcattgctccacaagaaatgttatagaaagagcc
tttggtgtattgaagaggcgatttcatatactacatacagagatccggatgaagccactg
aaagtaagtaagattgtggtatgttgtgttgtattacacaaccttgcaaagctgtgggga
gaacccgaagaatttccgcccgaggatgaccagcagccccctactgttctgaaccatgac
gatgacatgtccggaaaggcagttcgggagtacattacaatgcaatacttcagttga
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