Mya arenaria (softshell): 128242633
Help
Entry
128242633 CDS
T09995
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 18-like isoform X1
KO
K08630
a disintegrin and metalloproteinase with thrombospondin motifs 16 [EC:3.4.24.-]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
maea01002
]
128242633
Peptidases and inhibitors [BR:
maea01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
128242633
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
TSP_1
Reprolysin
ADAMTS_spacer1
ADAMTS_CR_2
TSP1_spondin
Reprolysin_5
TSP1_CCN
Pep_M12B_propep
Reprolysin_3
PLAC
Reprolysin_2
ADAMTS_CR_3
Reprolysin_4
DUF3810
Motif
Other DBs
NCBI-GeneID:
128242633
NCBI-ProteinID:
XP_052815824
LinkDB
All DBs
Position
8:14296881..14401218
Genome browser
AA seq
1370 aa
AA seq
DB search
MIGVPMMLIHTVSLSWLMVAVLGHSGYHDHHNRDQPSNGTSNKPSNQDDLGKGHHRNAQK
SEPDSYSIVYPEVIDHTAGILVNDVKSYVGRRKRTLGQENKPLEISISGSGEMFDLELWE
NDNLFSPGFKIYHRQTLKQAQTEKEIPHEDVLGCHFTGHLKGEAKNPASISICNGLNGII
RAGGDDYLIEPVKEATVHGSAGFIGQPHKLYKRSLVDSHNQRRYEAQKSGQQEIIVEKNG
ADGDDDEYDIEEQSKVLINDLGYNDLEKNFHSVEKRSVTSLEKRSAYKYRFLKEMNMPKT
VEVLVVVDKNMYHNHGDANITTYTLTLFNMLSQLFKDGSLGNKINVVLVGLILLEGDERG
LNIDYNADDTLNSFCQWQSVLVGANGRQHDHAILLTGLDLCSYKNSPCDTLGFAPMEGMC
NRVRSCTVNEDTGLSTAFTIAHEVGHNFGMFHDGEGNYCTESAGKIMSPTLMGKDGQFHW
SVCSKAYLMRFLNTPQSDCLDDEPKQVAELKFPDKLPGELYNADIQCKWQFGSKARLCTY
DFGKDICKALWCYRGNKRCETKFLPAAEGTSCGTGKWCRMGKCVDYGNEGPRPIHGEWST
WSEWSECSRSCGGGVITRERECSRPLPQYGGKSCDGDDKVYKLCNVQDCPAESEDFHAVQ
CSTYDKQPFRGWYLQWKPQRRHNDVNEPCKLYCVADTSNYVFTIKHTATDGMKCASDDEQ
ICVHGECRHVGCDWVIGSQLKSDMCGVCDGDNSTCQLIQGEYLEQPKLNTYFPVTILPKS
ARSIRIREKSLSSNYLAMRNIFGKYFLNGHQRVAWPGTYTLGGAKFHYSRPYNEPETLEA
DGPLEEELVLEILVQDHNPGIQYEYTLPKLAEVGSVTESLHNYTWSLSVSSCSEQCGEGE
KSVTAICLKDFEVEVDPDSCQESEKPETGVFPCNALPCKPRWVTESWSTCSKVCGGGKQK
RRVRCRQRVSKTKDKKLKNKNCRNLPRPITKQRCNEQECPPTWRAGKWSKCSVSCGEGMQ
VRKVRCRSKGRKQLPAIMCQGPPPNNTKSCDMGECPASQKKPRLLERPCIGGDCGYRWIV
SEWTRCSAECGGGQQKRQVWCENDSHDQVKNRHCRDMEKPERRQECNENSCPAAWQTGGW
TECSLTCGLGYQQRQISCRSNSTETSEILEDSQCPQPPPTSRSTCNLGPCEVMEEYDWLL
SPWGPCSQSCGPGYKSRHLRCSHVNHHHHHSVVNDNYCRNIPKPSTPMVESCKVTECSPE
RRHRHGPYGYQETFWWNVTKWSQCSVTCGEGVQSRIISCVNMLGQPSESCDVSTRPVATQ
TCNSGECLPTPLGQKACIDHYSWCHLVPHHQVCNNELYSEKCCKSCSIFL
NT seq
4113 nt
NT seq
+upstream
nt +downstream
nt
atgataggggttccaatgatgttaatccacacagtttccctgagttggctgatggttgct
gtgcttggacattcaggttaccatgaccaccacaatagagaccagcccagcaacggaact
agcaacaagcctagcaaccaggatgaccttggcaaaggtcatcatagaaatgcccagaaa
tcagaacctgattcctactccatcgtgtacccagaagttattgaccacactgctggcatt
ctggtgaatgatgtcaaaagctatgtcgggcgccgtaaacgaacgcttggccaagaaaac
aaacccctcgagatcagtatcagtggaagcggtgaaatgttcgaccttgaactttgggag
aatgacaatcttttttccccgggtttcaaaatttaccatcgacagacgttgaaacaagca
cagacagaaaaggagattccccatgaagacgttttgggttgccactttacagggcatctg
aaaggcgaggcaaaaaatccagcctctatctcgatctgtaatggactgaatggcatcatt
cgagcaggcggtgatgactatttgattgagccagtgaaggaagctacagttcatgggtcg
gcaggatttatcggacagccccacaagctctacaaacgctcactggtcgactcacacaac
caacggcggtacgaggcacagaaatcaggtcagcaagaaatcatagtggaaaagaatggt
gctgatggggatgatgatgaatatgatattgaggaacagagtaaggtccttattaatgac
cttggctataacgaccttgagaaaaactttcactctgtcgagaagcggtcggtgacgtcg
ctggagaagagatctgcgtataaataccggttcttaaaggagatgaatatgccgaaaacc
gtggaggtgctcgttgtggtcgacaagaacatgtaccataaccatggcgacgccaacatc
acaacatatacactcactctctttaacatgttgtcgcagctgttcaaggatgggtcactg
gggaacaagatcaatgtggtgctggttgggctcatactactggagggagatgagcgaggg
ttgaatatagactacaatgccgacgacacattgaacagtttctgccagtggcagtccgtg
ctggtgggagcaaatggacgtcagcacgatcatgcaatacttctgactggccttgatcta
tgctcatataagaactcgccttgtgacactttgggttttgcgccaatggagggtatgtgt
aacagggttcggagctgtacagtcaatgaggatactggactgtcaacggccttcaccatc
gcacacgaagtcggccataattttggaatgttccatgatggggaaggcaactactgtact
gagtctgctgggaaaatcatgtcacccaccctaatggggaaagatggacagttccattgg
tccgtctgcagcaaggcctacctcatgagattcctcaacacgccccagtcagactgtctt
gacgatgaaccaaagcaagttgctgagctcaagtttccggacaaacttcctggcgagctc
tacaatgccgacatacagtgcaaatggcagtttggtagcaaggcccgtctctgtacatac
gactttggaaaggatatctgtaaggcattgtggtgttaccgcggcaacaagcgatgtgaa
accaagttccttcctgcagctgagggcacgtcttgtggtacgggaaagtggtgtcgcatg
ggcaagtgtgtagactatggtaacgagggtccgaggccgatacacggagagtggtccaca
tggtctgaatggtcagaatgttctcgctcgtgtggcgggggtgtcattacacgggaaaga
gagtgctccagaccgctacctcagtacgggggtaagtcatgtgacggcgacgacaaggtt
tacaagctgtgtaacgtgcaagactgcccagcagagagtgaagatttccatgcagtacag
tgttccacctatgacaaacagccattcagagggtggtaccttcagtggaaacctcagaga
cgccacaatgatgtgaatgagccgtgcaagctgtactgtgtagcagacacgtcaaactac
gtgtttacgatcaagcacacagccactgacgggatgaagtgtgcctcggatgatgagcag
atttgtgtacatggggaatgcaggcatgttggttgtgactgggtgatcggttctcagctg
aagtctgacatgtgtggggtgtgtgacggggataactcgacgtgtcagctcatacagggg
gagtacctggaacagcctaaactgaacacttacttccctgtaaccatacttcccaagtcg
gccagatcaatccgcatacgtgagaagtccctctcgtccaactacctggctatgcggaac
atctttgggaagtatttcctgaacggacatcagcgggtcgcctggccggggacgtacaca
ctgggtggggcaaagttccattacagtcgaccttacaatgagcctgagacgttagaagct
gacggaccattggaggaggaacttgtattagagatcttggtacaagatcacaaccccggt
atccagtatgaatacacgctgccaaagctcgctgaggttggaagtgtaaccgaatcactg
cacaactacacatggtccctctctgtgtcatcttgttccgagcagtgtggcgaaggtgag
aaatcggtaactgcaatctgcctgaaggactttgaggtggaggtggaccctgatagctgt
caagaatctgagaaaccagagaccggggtatttccatgtaacgctctgccgtgcaaaccg
agatgggtaacagaaagttggtcaacgtgtagcaaagtatgcggtggggggaaacagaaa
cggagagtcaggtgtcgccagcgtgtttcaaagacaaaggacaagaagttgaaaaacaaa
aactgtcggaatctgcctcggccaatcacaaaacagcgatgtaatgagcaagaatgtccc
ccgacttggcgggctggaaaatggtcaaagtgttcggtgagctgcggagaaggcatgcag
gtccgtaaggtacgctgtcgaagcaaggggaggaaacaactgccagccatcatgtgtcag
ggcccgccccctaacaacaccaaatcatgtgacatgggggagtgtccagcctcacagaag
aaaccacgcctcctggaaaggccctgcataggtggcgactgtggatacaggtggatagtg
agcgaatggacacggtgttctgcggagtgtggcggtggtcaacagaagcgtcaggtttgg
tgcgagaatgacagtcatgaccaggtgaagaatcgccactgtcgggacatggagaaacca
gagagacggcaggagtgtaacgagaatagctgtcccgcggcatggcagaccgggggctgg
acggagtgctctctaacctgtgggcttggctaccagcaaagacaaatctcgtgtcgtagt
aactcaacagaaacctctgaaatcctcgaggacagtcaatgtccacagcccccacccacc
tctcgcagcacatgtaatctggggccatgtgaggtcatggaggaatatgactggttgttg
tcgccatggggaccgtgttcgcaatcctgcggtcccggatataagtcccgacacctgcga
tgttcgcacgtcaaccaccatcatcaccatagcgttgtcaatgacaactactgccgaaac
attccgaaaccaagtacacctatggtggagtcgtgcaaggtcacagaatgttcgcctgaa
cgacgacaccgtcatggaccgtatggttaccaggaaacattctggtggaatgtgacaaaa
tggtcgcagtgttcggtgacgtgcggtgagggggtccagtcccggatcatctcgtgtgta
aacatgctgggtcaaccgtcggaaagttgtgatgtctcaacacggcccgtggctacacag
acgtgtaacagtggggagtgcttaccaacacccttaggtcagaaagcatgcatagaccac
tactcgtggtgtcaccttgttccccaccaccaagtgtgcaataacgaactctacagcgaa
aaatgctgcaagtcatgctccatctttctctag
DBGET
integrated database retrieval system
