Mya arenaria (softshell): 128242662
Help
Entry
128242662 CDS
T09995
Name
(RefSeq) probable ATP-dependent RNA helicase DHX35 isoform X1
KO
K13117
ATP-dependent RNA helicase DDX35 [EC:
5.6.2.6
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128242662
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
128242662
Spliceosome [BR:
maea03041
]
Complex C
Other components
Complex C specific factors
128242662
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
ABC_tran
nSTAND3
Cas3-like_C_2
AAA_19
AAA_7
Motif
Other DBs
NCBI-GeneID:
128242662
NCBI-ProteinID:
XP_052815862
LinkDB
All DBs
Position
8:complement(26521249..26734756)
Genome browser
AA seq
700 aa
AA seq
DB search
MSSKMKFWKPGEEAPGRGLQEERGSGREGEAQPAVYNPNKSLSIEQQRQKLPIFKVRNHI
LYMVEKYQTVVIVGSTGCGKSTQIPQYLLEAGWGDEGHLIGITQPRRVAAITVANRIAEE
KGCLLGDEVGYLIRFDDCTDAHKTRIKCMTDGMLIREIMQDPLLSKYSVVMLDEAHERTL
YTDIILGLVRKIQQKREDLRVIVASATLNAEEIKDFFNRNESSDFSKDTAAILSIEGRTH
PVDIHYSLDPVPDYVKATVETIVKIHNNEKQGDVLAFLTGMDEVNTVTSMLIEEAKKLVK
VKDAMRMKIVPMHGSLPGAEQMKVFERTPKNCRKIVVATNIAETSITINGIVYIVDSGFV
KIKNYHPKTGIESLIVVPVSQASADQRAGRAGRVRAGKAFRLYTESSYEKLSENTVPEMQ
RSDLAPVILQLKALGIANVLRFHFLSAPPAQNMVRGLELLYALGALDDNGNLTSPLGLRM
AECPLTPSFAKMLLVSGEFGCSEEVVIVAAMSQIQNVFVTPTGQRHTADRMKKKFSVEEG
DHVSLVNTYRAFIKYGSSKAWCHENLLNYKGLVRAGEIRHQLTRILQRFNIPILSCGEDV
EPLCKCITAGLFANTARFHPSGVYRTVRDDHTLYIHPTSVLYTEKPPKWVVFNEVVQTTK
DYMRDVTVIDPGWLCELAPDFYQFGTEREIAAKRTRRDAS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaaaaatgaaattttggaagccaggtgaggaggccccagggcgtggccttcag
gaagagaggggatcaggacgtgagggggaagcccagccagctgtgtacaacccaaacaag
tccctatctatagaacaacagagacaaaaactgccaatcttcaaggtgaggaaccatatt
ctgtacatggtagagaagtaccagacagttgtcattgttggatccacaggctgtgggaaa
agtacacagattccacagtacttgctggaagccggttggggagatgaaggtcaccttata
ggcattacccagccacgaagggtggctgccatcacagtggctaaccggatagcagaagag
aaaggctgtctattgggggatgaggttgggtatctcatacggtttgacgattgtacagat
gcacacaaaactcgcatcaagtgcatgacagatggaatgctgatccgagagatcatgcaa
gacccactcctttcgaaatacagtgttgtcatgttggacgaagcccatgagaggacactc
tatactgacatcattcttgggcttgtgagaaagatccaacagaaacgggaagacttacgg
gtaattgtggcctctgcgaccctcaatgctgaggagatcaaagactttttcaacagaaat
gaatcatcagattttagtaaggacacagcggccattttgagcatagaggggagaacccat
cctgtcgacattcactactcacttgatccagtaccagactatgtgaaggccacagtggag
accattgtgaagattcacaacaatgagaaacaaggagatgtgctcgccttccttactggc
atggatgaggtgaacacagtgacatcaatgttaatagaggaagctaaaaagctggtaaaa
gtgaaagacgccatgaggatgaagattgtcccaatgcatggcagtctgcctggcgctgaa
cagatgaaggtatttgagagaacacccaagaactgtcggaagattgttgtggcgacaaac
atagctgaaacctccatcaccataaacggcattgtctatattgttgacagtggattcgta
aaaattaagaactaccatccaaagacgggtattgagtcactgatagttgtaccagtttcc
caggcatccgctgaccagcgggcaggccgtgcagggagagtaagggccggaaaggctttc
agactgtatactgaatcatcttatgagaagttatcagagaatactgttccggaaatgcag
agatccgatctggcccctgttatactccaacttaaagcccttggcattgcaaatgtgctc
agatttcatttcctttctgcccctccggctcaaaacatggttcgaggtttagaacttcta
tatgcgttaggagcccttgatgacaacggtaacttgacgtctcctctcggtctcagaatg
gcggagtgtccacttaccccctcttttgcgaagatgctgctggtctctggagagtttggc
tgctcagaagaggttgttattgtagcagccatgtcacagatacaaaatgtctttgtaacc
ccaacagggcaaagacatactgcagatcgtatgaagaaaaagttttctgttgaagaaggg
gatcatgtttctctagtaaacacttacagggcattcattaagtatggctcgtcgaaagct
tggtgccatgagaaccttctcaactacaagggtctggtacgtgccggggagatacgacat
caactcacgaggatactacagagattcaacataccaatactgtcgtgtggagaggatgtt
gagccgctatgcaagtgcatcacagcgggcctttttgccaacacagcacgatttcacccg
agtggagtgtaccgtactgtaagggatgaccacaccctgtatatacatcccacctctgtg
ttgtacacagagaagcccccaaaatgggttgttttcaatgaggtggttcagacgaccaag
gactacatgcgagatgtgactgtcatcgatccaggctggctctgtgaactggcaccagac
ttctaccagtttggaactgagagggaaatagctgcgaaaaggacaagaagggacgcaagc
tga
DBGET
integrated database retrieval system
