Mya arenaria (softshell): 128242712
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Entry
128242712 CDS
T09995
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12-like isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
128242712
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128242712
Enzymes [BR:
maea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
128242712
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
HECT type E3
128242712
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
UNC45-central
DSHCT
TRIC
Motif
Other DBs
NCBI-GeneID:
128242712
NCBI-ProteinID:
XP_052815929
LinkDB
All DBs
Position
8:complement(44307775..44353673)
Genome browser
AA seq
2177 aa
AA seq
DB search
MADQADCLSGGGSTTQTRKYGAKHREVITSPGIAKRTRSRDRQSEEKDLVPKKAKFQSES
PSSKKRAVGSNTNQNRNSNPAEGKAVVVKKRGRSASGTKSKSALTTVSETAADRRRSKSE
SSVLQKSLALSQSGICTSSSFDERSKVLNSVLHESISDISSSSCSVINHSVAGKTRRKSG
SKSSGQDLVKAADSSSIAATNCSSRSSVLSVKSRKSSGSSVVSHASSDSLIANCEKCRKE
KKSGKRRPRSTSSWTVTDSTSATQSQSNLSETSKASIKHCLRASTQAQSRAEVGTYRISR
KRTKATVASPYSDTFEPATKLHKLDKLVDVNFISERKIDNNTNQDIQVESLPASFLVTVP
GTSYPRVKDSLSGEKKLKEKKRRKEKRKKSDLGEGPSERKTNSSVPPEPKSLRRKHRARK
TGSCASSSGRQSSTASKRHSSGGSSRSNTATTAAAPGVVGSAVLLDPSCSNFSGGLALPQ
STLMSDGENSVPTSTGGGTSKTSQEENTQSTGVGSGAGGATAMMSESETEEADVGRLQAL
LEARGLPSQLFGALGPRMHQLLHRTMGSNSSMNKAQQLLQGIQATGNEDQQLSSVIEMCQ
MLVMGNEDTLAGFPVKQVVPALISLLQMEHNFDMMNHACRALTYMMEALPRSSAVVVDAV
PVFLEKLQVIQCMDVAEQALTALESLSRKHSKSILQAGGIAACLMYLDFFSINAQRCALA
ITANCVLNMTSEEFHYIRDSVPMLSSRLSHQDKRSVESVCLCFARLVDNFQNDRRVLKEI
AVQGLLTYIQQLLVVSPPVISTGTFVMVIRMLAIMCGNCPDLAVVLLRQKVADTLCYLLV
GTSEEASKQIELVSRTPQELYEIVCLIGELLPVLPGDGIFSIDALMRKGSLTSVDAVCWQ
WKDDRNLWHNYSPIDSKIIEAAHQSGEDEVSLSTFGRAYTLDFNTMQQINEDTGTARAVQ
RKTNQAANTAQGGGSASETDLERCDSRAEVLREDSELASAFIKTLFAVLYEVYSSSAGPT
VRHKCLQTLLRMIFFSSNDLLQDVLKSQPVSSHIAAMMASQDLKVVVGGIQMAEVLMQKL
PNIFNVFFHREGVMHQMKKLSEMDPQAVTPVKPPQPQPSPVGAGSLLSVTSSDTTCSAGS
AETDQRESDSTHSVSDSGGNHASQQALDDRDHGATQMRLSDVLKRKKPPKRPARKGSKNE
ESPETSVKSSSNRSRGRLNSKEKGSSGSSSKMSFLPSLNPRSWGKLGGSSSSSSTDRPLL
SKYSVVKQAPPAGPNNKDKIKIWIKQQAIRFLEQYFSEETKPGSTSALSTLNRLCAATDS
LTLEDDCGLESLTEISVIMRDSDVSPFEVIHSGLVNKLLLYLTTMEGAVPRDVRIRRFLH
VFLNCPSPDIVYMKEVKAPDFGEPCSMLPLVQKLMACLHQLEQFQVKVHDLPGGSATSGR
GSNALKFFNTHQLKCLLQKHPSCTSLKQWKGGPVKIDPLALVQAIERYLIMRGYGRLKEA
DDDGSDDDSDEDVDDTMAAVFISQGQARHRLEFLIGDHVLPYNMTVYQAIRQYSNCTDRE
GSETDTDSENPVGHASVWVQTHTIWYRPAPDGDDSIVTSPKKTKSEQKAAKTSHKKKTEE
LWTDGNCPGFVPALNAYLTDKLPAFVTVQDPSLDVIALLRILHAFNRCWATVYEVPSHFA
KPVLPKPEFISSKLMAKANRQLQDPLVIMTGNLPSWLAEIAAAAPFLFPFDTRQLLFYAT
TFDRDRALMRLQDNSVDNSSNDSSDRVAPRLDKRKRVVNRVDLLKQAEKVMEDLASSRAM
LEIQYENEVGTGLGPTLEFYALVSKELQRSELEMWRGDVIQEKDASGIETGNQYMYSPCG
LFLVPLARNTKAAVVNKIKTKTKFLGKLMAKSLMDSRMLDIPLSEVFFKWLLGQEHSLTS
SDLSHLDPGLARSFSQLEDVLRQKQRIMADKSHTEESRRLALGSLSLDGCSIEDLDLDFT
LPGYPNIELKKGGKDRQVTLENLEEYLQLVTHWSLVEGVSRQFESLREGFESVFPVTSLQ
SFYPEELEQLFCGNSAEVWDVKTLMECCRPDHGYNHDSRAVRFLYEVLASYSPDEQRLFL
QFVTGSPKLPVGGFRSLSPALTIVRKSFESTENPDSFLPSVMTCVNYLKLPDYSTVEVMR
EKLAIAAREGQLSFHLS
NT seq
6534 nt
NT seq
+upstream
nt +downstream
nt
atggccgatcaagctgattgcctcagtggtggggggagtacaacacaaacaaggaaatac
ggggccaaacacagagaagtaatcacaagtccaggtatagcaaagagaacaagaagtcgt
gacagacagtccgaggagaaagatttggtccctaagaaagccaagttccagtcagaatct
ccgtcctctaagaagagggctgttggaagtaacacaaaccagaacagaaactcgaaccca
gccgagggcaaggctgttgttgtaaagaagagggggcgatcagcaagcggcaccaagtcc
aaatcagcactcaccacggtatcagaaacagctgctgatagaagacggtctaaaagcgag
agcagtgttctccaaaaatctctggccctatcccaaagtgggatctgtacaagttcgtca
tttgacgagagatcaaaagttttgaattctgtgctacatgagagtataagtgatatctct
agttcatcctgttcagttattaatcacagtgttgcaggtaagacaaggagaaaaagtggt
tcaaagtcatctggtcaagacttagttaaggcagctgactcaagcagcatagcagctaca
aactgctcttctagatcgtcagtgctgtcagtgaagtctagaaagagtagtggatctagt
gttgtgtcacacgctagcagtgacagcctcatagcaaactgtgagaagtgtcgcaaagag
aaaaagtccggcaagcgcaggccacggtcaacaagttcttggacagtgactgattcaaca
tcagctacccaatcacaaagtaatctgtcagagacttccaaagcgtcaatcaagcactgc
cttcgggccagcacgcaagcccagtcacgggctgaggtaggaacatatcggatctcacga
aaacgaacaaaggcaacagttgcatcaccatattcagacacatttgaaccagccaccaag
cttcacaaacttgacaagctggttgatgtaaactttatatctgagagaaagattgacaat
aacacaaaccaagatattcaagttgaaagcctcccggcttcatttttagtgacagtacca
ggtacaagttaccctagagtcaaagactcgttaagtggagaaaagaagttaaaagagaaa
aagcgacgcaaggagaagcgcaagaagagcgatcttggtgaaggtccctctgagaggaaa
acaaacagttcagtcccgcccgagcccaagagcttacggcggaaacacagggccaggaaa
acgggctcctgtgcaagtagcagtggtcggcaatcctcgacagcatccaaacgccacagc
agcgggggaagttcacggtccaacacagcaacaacagcagcagcaccaggtgttgttggc
agtgcagtgttgctggaccccagttgtagcaactttagcgggggactggccttaccacag
tcgacactcatgtctgacggtgaaaactcggtgccgaccagcaccgggggcggcacctct
aaaacctcccaggaggagaacacacagtctacaggtgttggtagtggagcgggtggggcg
acagcgatgatgtctgagagtgagacagaggaagccgatgtgggcaggctgcaggcgtta
ctggaggcacgaggtctgccctcccagctgtttggggctctaggacccagaatgcaccag
cttctccatagaaccatgggcagcaacagctcaatgaacaaggcccaacagcttctgcag
ggtatccaggccacaggcaacgaggaccagcagctctcctccgtcatagagatgtgccag
atgttggtcatgggtaacgaggacactctggcaggtttcccggtgaagcaggtcgtccct
gccctcatctccttgctgcagatggagcacaactttgacatgatgaaccatgcctgccga
gccctcacatatatgatggaggcattgccgagatcgtcagcagttgtggtggatgccgtg
cctgtgtttctggaaaagctgcaagtgatacagtgtatggatgtggcagagcaggcgctg
acggcccttgagtcactctcccgcaaacacagcaagtccattctacaggcaggcggtata
gcagcatgcctgatgtacctggacttcttcagcatcaacgcccagcgctgcgccctcgct
atcacagccaactgtgtactcaacatgaccagtgaggagttccactacataagagactca
gtacctatgctgagctccaggctatcacaccaggacaagcgttcagtggagagtgtgtgt
ctgtgttttgcccggctggtagacaacttccagaatgaccggcgtgtgctgaaggagata
gctgtacaaggcctcctcacatacattcaacaactgttggtggtgagccccccggtgatc
agtaccggcacgttcgtcatggtgatccggatgttggccatcatgtgtggcaactgccct
gatctcgccgttgtcctgctcaggcagaaggtagcagacaccctgtgttacttgctggtg
ggcacttcagaggaggcatccaaacaaatagagctggtgtcccgcactccacaggagctg
tacgagatcgtctgtctcattggggagttactgccagtgttgccaggagacggtatattc
tctattgacgccctgatgcgcaagggctccctgacaagcgtggacgctgtgtgctggcag
tggaaggatgaccgaaacctctggcataactactcccccatcgacagtaagattatagag
gctgctcaccagtcaggcgaggatgaagtgagcctgtccacgtttggccgggcatacaca
ctagacttcaacacaatgcaacaaatcaacgaagacaccggaacagcccgggcagttcaa
cgtaaaaccaaccaggcagccaacacagcacagggtggaggttcagcatccgagacagac
ctggagcgctgtgactctcgggccgaggttttacgagaggactcggaacttgcctctgcc
ttcattaaaacactgtttgctgtactctatgaggtgtacagctcctcggctgggccgacg
gtgcgccacaagtgtctacaaaccctgctgcggatgatcttcttcagcagtaacgatctc
ctccaagacgtactcaaatctcaacctgtctctagtcacatagctgcaatgatggcgtcc
caggatctgaaggtcgtggtcgggggaatacagatggcggaagttctcatgcaaaaactg
ccaaacatattcaatgtcttcttccatcgggaaggtgtgatgcatcaaatgaagaaacta
agtgagatggatccccaggccgtgacccctgtgaagccccctcaaccccagccctcacct
gtaggggctggctccctgctcagtgttacttcaagtgatacaacatgcagtgcagggtct
gctgagacagaccagcgagagagtgactccacccacagtgtgagtgactctggcggcaac
cacgcctcacaacaagcccttgacgacagggatcatggtgctacacagatgagacttagt
gatgtattaaaacgaaagaagccccctaagcgaccagcgcgtaaaggaagtaagaatgag
gaaagtccggagacgagtgtgaagtcgtcaagcaatcgtagtaggggacgtctcaactct
aaggagaagggaagtagtgggtcatcgtccaaaatgtctttcttgcccagtctcaacccg
cgcagctggggtaagctgggtgggtcgtcatcatcatcatctacagatcgaccactactg
tccaagtattcggttgtgaagcaggcgccacctgctggcccgaacaataaggacaagatc
aagatctggatcaaacagcaagccattcggttcctggagcagtactttagtgaggaaacg
aagcctggttccacttcagccctgtctaccctcaacaggctgtgtgcagccactgacagt
ctcacattagaggatgactgtggtctggaatcgttgacggagatatctgtgataatgcgc
gacagtgatgtgtccccgttcgaggtgatccacagtgggctcgtcaacaaactcctcctc
tatctgaccaccatggagggggcggtcccgcgagacgtccgcattagacgcttcctacat
gtcttccttaactgcccgtccccagacattgtgtacatgaaggaagtgaaggccccagat
tttggggagccatgcagcatgctgccattggtacagaagctgatggcgtgtctccaccag
ctggagcagttccaggtcaaggtccatgacctccctggggggtcagccacctcgggccgg
ggctccaacgccctcaagtttttcaacactcatcagttgaagtgcctgctgcagaagcac
ccatcctgcaccagcctgaagcagtggaagggtgggcccgtcaagatagaccccctggcc
ctggtacaagctatagagagatacctgattatgcgaggatacggacgtctcaaggaggcg
gacgatgacgggagcgatgatgactctgatgaagacgtggatgataccatggctgcagtg
ttcatcagtcaaggccaggcccgacaccggctagagttcctgattggggaccacgtgctg
ccatacaacatgaccgtgtatcaggctatccggcagtacagcaactgtacagacagggag
ggcagtgagacagacacagactctgagaaccctgtaggacatgccagcgtgtgggtccag
acacacactatatggtaccggccggcaccagatggcgatgactccatagtaacaagccct
aagaagaccaagtcagaacagaaggcagccaagacaagccataagaagaagaccgaggaa
ctctggacagatgggaactgccctggttttgtgcccgccctaaatgcatacctaaccgac
aagctccctgcgtttgtaacagtccaggacccgtcattggatgtgattgccctgctccga
atcctgcatgccttcaatagatgctgggcaactgtgtatgaggtgccatcccactttgca
aagcctgtgttaccgaagcccgagtttatcagctccaagttgatggccaaggcaaaccgc
cagcttcaggatccccttgttatcatgaccggcaacctgccctcctggctcgccgaaata
gcagctgcagcgccgttcttattcccatttgacacgcgtcagctgctgttctatgccacg
acgtttgaccgtgaccgagcgctaatgagactacaagacaactctgtggataactcaagc
aacgacagcagtgacagggtcgcacccaggctagacaagagaaagcgtgtggtgaatcga
gtggacctgctcaagcaggcagagaaagtgatggaggacctggcctcctcccgcgccatg
ttagagatccagtacgagaatgaggttggtactggtctgggtccaaccctagagttctac
gcccttgtgtctaaggagctgcagcggtctgaactggagatgtggaggggagatgtgata
caggagaaggatgcttcaggcattgagacaggtaaccagtacatgtactctccctgtgga
ctgttcctggttccgcttgcccgcaacacaaaggctgccgtcgtaaacaaaattaagaca
aagacaaaatttcttggcaaactgatggcaaagtctctcatggactccagaatgctggac
atcccgttgagtgaggtgttcttcaagtggctgctgggccaggaacacagcctcacttcc
agtgacctctctcaccttgacccaggactggcgcgatcattctcacagctggaagatgtg
cttagacagaaacaacgcataatggcagacaagtcacatactgaggaaagtcgtcgcctg
gcgcttggcagcctgtctttggatgggtgtagtatagaagacctggatcttgacttcacg
ctgcctggctacccgaacattgagctgaagaaggggggaaaggatcgccaggtaaccctg
gaaaacctggaggagtacctgcagcttgtgacccactggagcttggtagagggcgtgtct
cgacagtttgagtctctgagggaggggttcgagtctgtgttccccgtgacctcactacag
agcttctatcctgaggagttggagcaactgttttgtggtaacagtgcagaggtctgggat
gtgaagaccctgatggagtgttgtcggccggaccacgggtacaaccatgacagtcgggcc
gtacgattcctgtacgaggttctagcctcctactcccccgacgagcagagactcttcctt
cagtttgtgaccggatctcccaaactcccagttggaggattccggagtctcagccccgct
ctcaccatcgtgaggaagagcttcgagtccacggaaaaccccgacagcttcctgccatct
gtgatgacctgcgtcaactatctcaaactgcccgactattctacagtggaggtgatgcgc
gaaaaactggccatcgctgccagggaaggacaactctcattccacttgtcatga
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integrated database retrieval system
