Mya arenaria (softshell): 128242734
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Entry
128242734 CDS
T09995
Name
(RefSeq) uncharacterized protein LOC128242734
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
128242734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128242734
03400 DNA repair and recombination proteins [BR:
maea03400
]
128242734
Enzymes [BR:
maea01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
128242734
Messenger RNA biogenesis [BR:
maea03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
128242734
DNA repair and recombination proteins [BR:
maea03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
128242734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
AAA_34
Pch2_N
Motif
Other DBs
NCBI-GeneID:
128242734
NCBI-ProteinID:
XP_052815962
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All DBs
Position
8:complement(66750559..66753287)
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AA seq
459 aa
AA seq
DB search
MNVGAIFKMAIPMAIRKVVGEMEFITALKHNQMEILMEILNGNDCFAILPTGYGKSLPYQ
MFLPVKRALNPENHDTVLVCCPLISLMEDQVRRVQQFGVTAALRGTDQDANEAIDDGTIS
VIFASPEALAEEWVRQIKDVSLIVVDECHTISMWGGLDVDEEKAFRKYFRFIGTLRSIFP
DATVLALSATCTLKMKTQIMSNLNLSGKARVIETSPNRANIKYVVKRTPIAIEETFFWLI
DKLCELKKDFPRILIYCNSIKDVCQLFNYVVTETNLMDQNVVEMYHSETPQEKKEHIVQN
LGLDSQMKVVIATTALGLGVDVKNCHGVILFGPPKDVVDLLQESGRCGRNDEPSVCVIFC
NRYQLNHISKEVKEVIGSVECRRRCLLKNFTSEEVVSDPAHMCCDLCVSHCNCGSCTPHP
IEVLVGTFSAKAEDALVSSDSDTISYEYESDVSFDGGFE
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtaggcgcgatcttcaaaatggcgatacccatggctatccggaaagttgttggt
gaaatggaatttataacggccttaaaacacaatcaaatggaaattctaatggaaatactg
aacggaaatgattgttttgcaatactgccaactgggtatggtaaatcattgccgtaccaa
atgttcttaccagtaaaaagagctcttaatcctgaaaatcatgacacggtgttggtatgc
tgtcccctcatctcccttatggaagaccaagtcagacgagtgcagcagtttggagtaaca
gctgccttgagaggcacagaccaagacgccaatgaggcaattgacgatgggacgatcagt
gtgatatttgcttcaccagaggcacttgcagaagagtgggtcaggcaaattaaagatgta
tcattgatagttgttgacgagtgtcacacaatttcaatgtggggtggtctagatgttgac
gaggagaaggcctttcggaagtatttccgctttattggaacattacgctcaatatttcca
gacgcaacagtgttagccctgagtgctacttgtactttgaaaatgaaaacgcagataatg
agcaatttgaatcttagtggaaaggcccgagttattgaaacctctccaaacagagccaat
atcaaatatgttgtaaaaagaacaccaattgccattgaggaaacctttttttggttaata
gataaattgtgtgaattgaaaaaagacttcccaaggattttgatatactgtaattccatc
aaagatgtatgccaactttttaactatgttgttactgaaacaaatttaatggatcaaaat
gtggttgaaatgtaccattctgaaacgccgcaagaaaaaaaagaacacattgtgcaaaat
ttagggcttgactcccaaatgaaagtagttattgcaacaacagctttaggcttgggtgtt
gatgtcaagaactgccatggggtgattttatttggaccaccaaaagatgttgttgatctg
ttacaggaaagtggacgatgtggtcgtaatgatgagccctcagtctgtgttattttttgt
aatcggtatcaattaaatcatatttcaaaagaagtgaaggaagtaataggttctgtggaa
tgtaggaggaggtgtttgttgaaaaactttaccagtgaagaggttgtctcagacccagca
catatgtgctgtgatctctgcgtttctcactgcaactgtggttcctgtacaccccatccc
atagaagttttagtaggtactttttccgctaaagcagaagatgcattggtcagtagtgac
agtgatactatttcctacgaatatgaatctgatgtcagtttcgatggtggctttgaatga
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