Mya arenaria (softshell): 128242827
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Entry
128242827 CDS
T09995
Name
(RefSeq) RNA-binding protein 39-like
KO
K13091
RNA-binding protein 23/39
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
maea03041
]
128242827
Spliceosome [BR:
maea03041
]
Common components
Common spliceosomal components
General mRNP proteins
128242827
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_PARP14_3
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
128242827
NCBI-ProteinID:
XP_052816139
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All DBs
Position
8:72576641..72593905
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AA seq
531 aa
AA seq
DB search
MADELDVEAMLEAPYRKEDDGRGDASNDKDRKSSSSRRRSRSRDRDRDRKRSDRDRDRDR
DKDSKRSKDKKRSKSRDRKRSRSKDKKDRRRSRSKDRKEKRRSRSRDRKSRSRRRRSITK
SPVREPLMEMTPEERDARTVFCMQLSARIRPRDLEEFFSSVGEVKDVRLITDNKTRRSKG
ISYIEFKDTESVPLAIGLTNQKLLGVPIIVQASQAEKNRAPMPTNIVAKAPVTGPMRLYV
GSLHFNITEDMLKGIFEPFGKIEDIKLIRDHETGKSHGYGFITYKNHEDAKKALEQLNSF
ELAGRPMKVGNVTERAMDMQMGGQLDNDELDRAGIDLGATGRLALMAKLAEGTGFEIPDY
AKNSLQMQGMPASMGMNQGMPNTNAQVKPQVPATTTQAPPIATQCFMLSNMFDPTIESKL
SWDQEIRDDVIEECSKHGGVLHIFVDKASPQGNVYVKCPTIAAAVASVNSLHGRYFGGKI
IQAAYVPLPNYHALFPEAQRASQLLLPSTQTLNVGGFAPPTSMFNGGGLMR
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgagttagatgttgaggccatgttggaggccccgtacaggaaagaggatgat
ggaagaggagacgcttccaatgacaaagacaggaaatcttcttcctcccgccgtagaagt
cgaagcagggaccgggacagggacaggaagagaagtgacagagatcgcgaccgtgaccgt
gacaaggacagcaagcggagcaaggacaaaaaacgaagcaaaagccgagacagaaaacgt
agtaggagtaaagacaagaaagatcgtaggagaagcagaagcaaagaccgtaaagagaaa
cgaaggagtagatcacgggaccgcaagagtaggtcacgtcgtaggaggagcatcactaaa
agtcctgtcagagagccgttgatggagatgacgcctgaagagagagatgcaaggacagtg
ttctgtatgcagctgtctgcccgcatcaggccgagagatcttgaggagttcttctcttct
gtaggagaggtaaaggacgttagattgatcacggacaacaaaacgcgccggtcaaagggt
atttcatatatagagtttaaagatacagaatctgtgccattagccattggactgaccaat
cagaagctgctgggtgtgccgatcatcgttcaggcatcacaagcagagaaaaacagagca
cccatgcccacaaatattgttgccaaagccccggtgacaggacctatgagattatatgtt
ggttccctgcattttaacatcactgaagatatgttgaaaggcatatttgagccattcggg
aagattgaagacatcaaactgatcagggatcatgagacaggaaagtcacatggatacggt
ttcattacttacaagaatcatgaagatgcaaagaaagctttagagcagttgaatagtttt
gagctggcagggcgacctatgaaggtgggcaatgtgactgaaagagcaatggatatgcag
atggggggacagctggacaatgatgagctggacagggctggcatcgacctgggagctact
gggaggctagctctgatggccaagctggctgaaggtacagggtttgagatccctgattat
gcgaagaactctctccagatgcagggcatgcctgcgtcaatgggcatgaatcagggtatg
cccaataccaatgcccaggtgaaaccccaggtcccagcaacaaccactcaggcaccgccc
attgctacacaatgcttcatgctctccaacatgtttgatcccactatagagtcgaagctg
agctgggaccaggagatccgagacgatgtgatagaggaatgcagcaagcatggtggggtg
ctgcacatctttgtggataaagcctccccacagggcaatgtctacgtcaagtgcccaacc
atcgcagctgccgtcgcatctgtcaactccctgcatggtcgatactttggagggaagatc
atccaggccgcatatgtgccattaccaaactaccatgccttgtttccagaggctcagaga
gccagccagcttcttctgccctccacacaaacacttaacgtgggtggctttgcaccaccc
acgagcatgttcaatggcggtgggctgatgagataa
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