Mya arenaria (softshell): 128242863
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Entry
128242863 CDS
T09995
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
maea03019
]
128242863
04121 Ubiquitin system [BR:
maea04121
]
128242863
Enzymes [BR:
maea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
128242863
Messenger RNA biogenesis [BR:
maea03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
128242863
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
128242863
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
zf-C3HC4_4
zf-RING_2
zf-RING_5
DUF5711
ANCHR-like_BBOX
Motif
Other DBs
NCBI-GeneID:
128242863
NCBI-ProteinID:
XP_052816216
LinkDB
All DBs
Position
8:68532213..68539213
Genome browser
AA seq
766 aa
AA seq
DB search
MASISDALGDHGVCPLCRDQFRDPRVLPCLHSFCKDCLERCHHDQGLNDSFACPSCKQPG
SLNSGGIEGIPSSIFISNILDVMVSQDEYENGEINANFGDCFCNCSEGSRATSLCKNCHE
YLCDNCVKAHQRVRLTKDHFIESIKRRGFQHQITPTVSLNSPSLSTAQGDRQNTPCSKHE
HEILRVYCDSCLTPICRECTMTEHVGHSIIYLKDAIDNSKSVTVKLLKDARAGMKAIEES
LQLTQGMAERVELRSQAVSNEIRNITRRHMAALEERERDLLRRVEKIRQVKGKSLHMQMD
DLKQGLMSISRTVEDVESVLNNGRDVDILKTNESMVNEMQKLRALRGHFEPHEDDSILFT
PPDAALHIAISKLGFISSSAYAPNCIAYGDGLKRALKGKIAMFAIQAKDHLGEQRVVGGD
PIQCLISSPEGAMYRTEELDRQNGTYNVSYRPQCEGKHVISVMINGKHIHESPFSVEVRS
GRNYATVGQMLAQFGGEGEEPGKLCRPWGICFHKEGFILVADRSNNRIQAFNINGVYQYH
FGSAGTRNGQFDRPAGVASDIQGRVVVADKDNHRIQIFTVDGTFLHKFGEKGNKNGQFNY
PWDVAINSEGKILVSDTRNHRIQLFTSDGLFINKYGFDGALWKHFDSPRGVCFNNEGQMV
VTDFNNHRLLVIHPDFQNARFLGTEGSANGQFMRPQGVVVDQEGNIIVADSRNHRIQVFQ
PNGNYMCKFGSPGSGPGQLDRPSGICVLPDSRILVVDFGNNRVEVF
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atggccagtatatcggatgctctaggggatcacggcgtttgtccgctgtgccgtgaccag
tttcgggacccccgggtgttgccctgtttgcactcgttctgtaaggactgccttgagcgg
tgccaccatgaccagggtctcaatgactcctttgcttgcccatcgtgcaagcagccgggg
tcgctcaactctggtgggatcgagggaataccttctagcatctttatttcaaacattctt
gacgttatggtctcacaagatgagtatgaaaatggtgaaataaatgccaactttggagat
tgcttctgtaactgctcagaaggaagtcgagctacctcactatgtaagaactgccatgaa
tacctgtgtgacaactgtgtcaaggcacaccaacgggtgcgtctcaccaaagaccacttt
attgaaagtataaaacgccgaggatttcagcatcagattacaccaacagtttctttgaat
tccccaagtctttccactgcccaaggtgatcgtcagaacactccatgctctaagcatgaa
catgaaatattacgcgtttattgtgacagctgccttacaccaatttgccgcgagtgcaca
atgacggagcatgttggtcacagcatcatctacctcaaagatgccatcgataattccaaa
tctgttactgtcaagttattaaaagatgcaagagctggaatgaaggctatcgaagaaagt
cttcagctaactcagggtatggctgaacgggttgagctaagatcacaagcagtttctaat
gaaattaggaatataacacgtcgacacatggctgctctggaagaacgcgagcgagatctc
ttaaggcgtgttgagaagatacgccaggtaaaaggcaaatccttacacatgcaaatggat
gacttaaagcaaggattgatgtcaataagcaggactgttgaagatgtggaaagtgtttta
aacaatggtcgtgatgttgatattcttaaaacgaatgaaagcatggttaatgaaatgcag
aagcttagagctttacgtggacactttgaaccacatgaagacgacagtattctttttaca
ccccctgatgcagctttacatattgccatttcaaaacttggcttcattagcagcagtgct
tatgcccctaactgcattgcatatggcgatggattgaagagagccctgaaaggaaagatt
gccatgtttgcaatccaggcaaaagatcatctcggcgagcagcgggttgttggtggagac
cctatccagtgcttgattagcagtccagagggtgccatgtatcgcacagaggaactggat
cgtcaaaatggaacatacaatgtctcctaccggccgcaatgtgaaggaaagcatgtaata
tctgtgatgatcaatggaaagcatatccatgaaagtccattctctgttgaggttcgtagt
ggccgtaactatgccactgttgggcagatgctggctcagtttggaggggaaggtgaagag
ccaggcaagttgtgtcgtccttggggaatctgcttccataaagaaggtttcatactggtt
gctgatcgcagcaacaatcgtatacaggcttttaatataaatggggtgtatcagtatcat
tttggttcagcaggtacgcgcaatggtcagtttgaccggccggctggagtggcctctgac
attcaaggccgcgttgtggtggccgacaaggataaccatcgtattcaaatattcactgta
gatggaacatttctgcacaagtttggtgagaaaggaaataagaatggtcagtttaactat
ccatgggatgtagcgataaactcagagggaaaaattcttgtgtcagatacaagaaaccat
cgtatccagctgttcacgagtgatggactgttcataaacaagtatggatttgatggagcc
ctgtggaagcactttgactcaccacgtggggtgtgcttcaacaacgaagggcaaatggtt
gttaccgatttcaacaatcatcgtcttctcgttattcatccagatttccagaacgctaga
ttcttgggaacggaaggcagtgcaaatggacagttcatgcgtccacaaggcgttgttgta
gaccaggaaggaaacattattgtcgccgactcccgaaaccatagaatccaggtgttccaa
cccaatgggaactacatgtgcaagtttggctcaccgggctctggaccgggccagcttgac
cgaccatctggtatctgtgtccttccggacagccgcattcttgttgttgactttggaaat
aatcgtgtggaagtattttaa
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