Mya arenaria (softshell): 128242865
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Entry
128242865 CDS
T09995
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
maea
Mya arenaria (softshell)
Pathway
maea04137
Mitophagy - animal
maea04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
128242865
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
128242865
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
maea04121
]
128242865
Enzymes [BR:
maea01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
128242865
Ubiquitin system [BR:
maea04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
128242865
Multi subunit type E3
ERAD complex
128242865
LMBR1L-GP78-UBAC2 complex
128242865
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-ANAPC11
CUE
zf-RING_11
G2BR
zf-RING_5
zf-RING_16
Prok-RING_4
RING_XB3-XBAT31
zf-C3HC4_4
zf_RING_Vps8
zf_RING_Vps8_fungal
RING_Ste5
FANCL_C
Motif
Other DBs
NCBI-GeneID:
128242865
NCBI-ProteinID:
XP_052816221
LinkDB
All DBs
Position
8:complement(14030044..14046254)
Genome browser
AA seq
669 aa
AA seq
DB search
MPVILLERIPLPSLSTYTGFSLVLLSCALFYAHQMVLTAESEGIDIPVPVGDNLDPGGTE
VHYMNISLPHDTYMWNMIYVMTSEAWCVWTLVNTAYCCLILLGKLVQKVVFGELRVSEQQ
HVRDKFWNFLFYKFIFVFGVMNVQTMEEVVLWVAWFTVLGFFHLLTQLAKDRFEYVSFSP
TTPRLVHVKLLSLLCVIILSCCGLLALCVYTGLQNGITIFAFMAAECLLLAIRTLYVVAR
YCLHLVDMNLEGVWENRATYIYYTELVFELAALSIDFGHHLHMLLWGNIFLSMASLVICM
QLRYLFYEFQRRIKRHKNYRKVVKNMEERFSMATPEEIASNDDDCAVCWEKMETARKLPC
GHLFHNSCLRSWLEQDTSCPTCRQSLNERPTTDPNGNLPDSPAHVENQPPPNAHPNQTTN
HFFHFDGSRYVSWLPSFSVEVTHTNMLANTRHTHVQTSQLDNMARQVLQVFPHMPINAVM
EDLRVTRSVDFTIENILEGRLIAPPPGTMLTRTALGDDDSNSDDSDNYQLSSSSQNSSTD
LPSYFDIPNERGDNNSTPVEASASKLLSQFGGRFSKSTVERESMLEDRKNTMLEQARRRF
LSTNQETDTSSTPESSDLNYTAEQSVPPSTSNFTFTGLTDQPDVLRHRRELAYLAAARRM
GQSSPDNGS
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtcattctgttagaacgaattcctttacctagcctaagcacatatacgggtttt
agcctcgtacttctttcctgtgccttattttacgcccatcaaatggtgttgacagctgaa
agtgaaggcattgatattccagtgccggtgggtgacaaccttgatccaggggggacagag
gttcactacatgaacatttccctgccacatgacacgtacatgtggaacatgatttatgtg
atgacatctgaggcttggtgcgtttggacacttgtcaatactgcatactgctgcctgatt
ctacttggaaaactggtacaaaaagtagtttttggagagcttcgagtcagcgaacaacag
catgtgagagacaaattctggaactttctgttctacaagtttattttcgtatttggtgtg
atgaacgttcagacaatggaagaggttgttctctgggttgcctggttcactgtgcttggg
tttttccacctcctcacacagctcgccaaggacaggtttgaatatgtttcattttcccca
accacaccgaggttggtgcatgtgaagctgctgtcattgctgtgtgtcatcatcctttcc
tgctgtggcctgctggcactgtgtgtctacaccggtctacagaacggcatcaccatcttt
gcctttatggccgctgagtgtctgctgcttgccataaggacactttatgttgttgctcga
tactgcctgcacctggtggacatgaatctagagggtgtatgggagaacagagccacctat
atctattacactgagctcgtgtttgagctggctgccctttccattgatttcggacaccac
cttcacatgttgctatggggcaacattttcctaagcatggccagccttgtgatatgtatg
cagcttaggtatctgttctacgagttccagcgaaggatcaaacgtcacaagaactaccgc
aaggttgtcaaaaatatggaagaaaggttcagtatggccacacctgaagagatagcgagt
aacgatgatgactgtgctgtgtgctgggagaaaatggaaacagctagaaaacttccttgt
ggtcaccttttccataactcctgtctgcgttcctggctggaacaggacacgtcgtgccca
acatgtcggcagtccctgaatgagcgtccgaccactgacccgaacggaaacctacctgac
agtcccgcccacgttgagaaccagcctccacccaatgctcatcccaaccagaccaccaac
cactttttccactttgatggttctcgctatgtgagctggctgcctagtttctctgtggaa
gtcacccacaccaacatgttggccaacaccagacacacccatgtacagacatcacagctg
gataacatggcccgccaggtattgcaggtgtttccccacatgcctatcaatgctgtgatg
gaggacctgagagtgacacgctctgtcgacttcaccatagaaaacatcctggaaggcaga
cttattgcacctccacctggcactatgttgacaagaactgccctaggagatgatgattcc
aactctgatgactcggataactaccagctctcttcctcaagtcagaattcatcgacagac
ttgccctcctattttgacattccaaatgaaagaggggacaacaactcaacaccagtagaa
gcaagtgcaagcaaattgctgagtcagtttggagggcggttttcaaaatccacagttgaa
agggaatccatgttggaagacaggaaaaatacaatgcttgaacaagctagaaggcgtttt
ttgtccacgaatcaagaaacagacacgtcatctacaccagaatctagcgatttaaactat
acagcagagcaaagtgtaccgccctctaccagtaattttacattcaccggactgaccgat
cagcctgatgttttacggcatcgcagggaactcgcatacttagcggccgctcgcagaatg
gggcaatctagtcctgataatggttcatga
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