Mya arenaria (softshell): 128242892
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Entry
128242892 CDS
T09995
Name
(RefSeq) trafficking protein particle complex subunit 8-like isoform X1
KO
K20305
trafficking protein particle complex subunit 8
Organism
maea
Mya arenaria (softshell)
Brite
KEGG Orthology (KO) [BR:
maea00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
maea04131
]
128242892
Membrane trafficking [BR:
maea04131
]
Endosome - Golgi transport
Tethering complex
TRAPP complex II
128242892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TRAPPC-Trs85
Ig_TPPC8_1st
Ig_TPPC8_2nd
Ig_TPPC8_3rd
Ig_TPPC8_C
SNAP
DUF6392
Motif
Other DBs
NCBI-GeneID:
128242892
NCBI-ProteinID:
XP_052816264
LinkDB
All DBs
Position
8:64397050..64426180
Genome browser
AA seq
1498 aa
AA seq
DB search
MAQHKQSAHDFIQCTFSPQVAVLTSSDAEVLCQKNNLSFVQLVQPFCRLKTEAHIKDPNN
VQHNLQHLRINMVDMNSHVSTPAVAKKMMHDAVSNEQPQMTEGSRGNVITVGDYDLQLSS
TTPWFEAYRECFLQTLPPSEHEFLKHCLACIFVVSSNHPEPLRMLQTLSSSQQQQQSQFP
NKLPQWFSPNILKYYVIVHDMVEAEAQKTEDVYQTMKSSFGHQSCHLLQINSRSMTAVET
MATDTSLPDPWGQFLHKTPETGKKPNKAKYFIAWEGVDYDGSASSGAEDVAFPSRVEEGE
PEPVTHVEGNAGVNGVGNNSAVIDHPLALSNESPLNSPGFEDYPQIPSTKSSMTSISSMH
SNMSKSGSFHLEKGRVSGHGMCLTASDQDRLRIFIHEFAVRALIPWAERQMRTLNELLMS
RTGIRKSIMGTAKKLFGGNPSKTSQVTNTATTVVYSKDAPELQMRRLADLAFLFQLYEFS
YNTYHTAKRDFNNDHAWLHFAGALEMASLAIFMQGPQGQRAYPDHYMESAITTYIQSCKN
VPYSVRATLVSTEALKSRGKYKDAAMQFIKMMSEESDLRSALLLEQAAHCFINMRAPMVR
KYAFHMILAGHRFTKAGQRKHALRAYSQALQIYKGKGWSLSEDHINFTVGRQSHNLKQLE
NATVAFKHLLTEHSKQSAMQQNSFLREYLFVYRQLLMQEAEETGLQSNTLPELPLPALDS
NATKVLLGARPTPSQGDKMYASGVWFEDSDTAAGKWERLEELLVMSVNGSLPVVHRPVKT
LYTDKTDNKFNPVAYVREPITVEFYLVNPLKVALTLTDVMLLWSFLPTIGSHDKPQLITN
ETMVTAKNNLADEIIHGQVVREIVLQGNDRLPVQMTLTPHQMGDLRIYGLTYNLGSSSTT
FMAPTQGPDNPLGGSGGTGGPSKASYVSTVFVRGKQKIEVQGPRLNGKKDEMVNKIYGPD
RRLDLTIQQEMPILQVSFLNFPKTLLCGEVHPVTVTFTNVGSTPLHRLKLATSNPKYLVL
GLNTDIRTSTSVYTSSSDCNETSSCVNCDPCAVKRVIDIDIPEGVLHPNSSISLPLWVRG
NDIGGVHEVDLLFYYESAKQTNKPKYRLLRHNILVNTVESLSVRAVAQRACKHSSEKESP
SVGEFLISCELENLSQQQTSRSHVREVFVRQVSCASKQWAIQSLSKYHNNGVCIGSRELL
QVCLKACHLPSQPSAEGNVTFSDIPFQENKLCSSVTPCRDFYVRSGVKLQTLEEQTTMVS
PSAQLAPPTRDEGQDFAPLNCAIDMDITLIILWQATVVDSAGTESVCVGQHHVVVEKPDN
IFTSYPFQHVPRERAPVRFVREEAADEETKPAFEVLTQLVSYSLQHPTNISHDFTKARVC
CLGVKLTFQNNSEATVIVLIDTSKAQQRLSEYQEGGPALDTVGSGFSWVGQTQRQVSLAP
KQVLEVPLTVSFSRPGVFNINNLAVFVAHTPDTSQMTLQKQTKPSVITVANTGGSRDV
NT seq
4497 nt
NT seq
+upstream
nt +downstream
nt
atggcacaacataaacaaagtgcacatgacttcattcaatgcacgtttagtccacaagtt
gccgttctaaccagcagtgatgcggaagtcttatgtcagaaaaacaatctatctttcgtt
cagttggttcaacctttctgtcgactaaaaacagaagctcacatcaaggacccaaacaat
gtccagcacaatcttcaacatcttcgaatcaacatggtggacatgaacagtcatgtgtca
acgcccgctgttgctaagaagatgatgcatgatgctgtaagcaatgagcaaccacagatg
actgagggaagtcggggcaatgtaatcactgttggagattatgatcttcaactcagctct
actacaccctggtttgaggcatacagagagtgcttccttcaaactttaccgccatctgag
catgagtttctgaagcactgcctagcttgcatatttgtggtgtcctcgaaccaccctgag
ccactacgcatgctgcagaccctatccagcagccagcaacagcagcagtcccagttcccg
aacaaactcccccaatggttctccccgaacatcctcaaatactacgttattgtgcatgat
atggtggaggctgaggcgcagaagacagaggatgtatatcagaccatgaagtcatcattt
ggacaccagagctgccacctactgcagataaactcacgctcaatgacagcagtggaaacc
atggcaactgacacaagtctgccagacccctggggccagttcctacacaaaacaccggaa
actgggaaaaagccaaataaggctaaatattttatagcttgggaaggggttgactatgat
ggctcagccagcagtggggctgaagatgtggcgtttcccagcagggtggaggagggggaa
ccggaaccagtcacacatgttgaaggaaatgcaggtgtgaatggtgtgggcaacaattct
gctgttattgaccacccactggctctcagcaatgagagccctttgaatagccctgggttt
gaggattatccacagataccttcaacaaagagctcaatgaccagtatcagcagtatgcat
tcgaacatgtccaagtctgggtcgttccatttggagaagggtcgtgtatcaggtcacggg
atgtgcctcactgccagcgaccaggaccgactccgtatctttatacatgagtttgccgtg
cgggctctcattccctgggctgagaggcagatgaggactttgaatgaattgctgatgtcg
aggactggaatccgtaaatccattatgggcacggccaagaagctgtttgggggtaaccct
agtaagaccagccaagtcacgaacactgcaaccactgtcgtctactcgaaggatgcccct
gaactacagatgcgacgcctagctgacctggccttcctgtttcagctgtatgagttttct
tacaatacgtaccacacagctaaacgagactttaacaacgaccatgcatggctgcatttt
gctggggcactggagatggcatccctggctatatttatgcagggtccgcagggccagcga
gcctaccctgaccactatatggagtcggccatcacaacctacatacagtcatgcaaaaat
gtgccctactctgtgagggctaccctggtcagtacagaggccctgaagagccggggaaag
tacaaggatgccgccatgcagttcattaagatgatgagtgaggagtctgacctgcgtagt
gcactgttactggagcaggcagcccactgtttcatcaacatgcgggccccaatggttcgc
aaatatgcctttcacatgattctagctggacacaggttcaccaaggccggacagaggaag
catgctttgcgagcgtacagccaggccctgcagatatacaagggtaagggatggtccctg
tcagaggaccacatcaacttcactgtgggtcgacagtctcacaacctgaagcagctggag
aacgcgactgtggcgtttaaacacctcctcactgagcacagcaagcagtccgccatgcag
caaaactccttcctccgggagtacctgtttgtgtataggcaactgctaatgcaggaggct
gaagagaccggtcttcaatccaacaccctgccagagttacccctccctgccctggatagt
aacgccaccaaggtcctcctgggggcccggcctacaccttcacagggtgacaagatgtat
gcgagtggtgtctggtttgaggactctgatacagctgccggcaagtgggagagactggaa
gagctgcttgtcatgtcagtcaatggctcacttcctgtcgtgcaccgacctgtgaagaca
ctctacacagacaagacagacaacaagttcaacccagtggcgtatgtcagagagcccatc
accgtagagttctacctggtaaacccactgaaggtggccttgaccttgactgatgtcatg
ttgctatggagtttcctaccaaccatcggcagccatgataaacctcagctcattacaaat
gaaaccatggtcactgctaagaacaatcttgctgatgagatcattcatggtcaggtggtg
cgagagattgtccttcagggaaatgacaggctcccagttcagatgacgctaacaccgcac
cagatgggtgacctgcgtatctatggactcacgtacaacctgggtagctcttccaccaca
tttatggccccgactcaggggccagacaaccccctgggtgggagtgggggcactggcggc
cctagtaaggcgagctacgtaagtacggtgttcgtgcggggtaaacagaagattgaggta
cagggtccccggcttaatgggaagaaagatgagatggtgaacaaaatctacggccctgac
cgacgccttgacctcaccattcaacaggaaatgcccatactacaggtgtcatttttaaat
ttcccaaagactctattgtgtggagaagttcaccctgtgacagtaacatttacaaatgtt
ggctccactcctctacatagactcaaactagccacatctaaccccaaatatctagtgcta
ggacttaatactgacattaggacttctacaagtgtgtatactagttcctcggactgtaac
gagacctcgtcatgtgtaaactgtgatccctgtgcggtgaaacgtgtgatagatattgac
attcctgaaggtgtgttgcatcccaactctagtataagtctacccctctgggtgcgggga
aacgatatcgggggcgtgcatgaagtggatttactcttctattacgagtctgctaagcag
actaataaacctaaataccgcttactacgtcataacattctagtcaacacagttgagtcc
ctgagtgtacgagcggtggcccagagggcgtgtaaacattccagtgagaaggaatccccc
agtgtaggggagttcctcatttcctgtgaactggaaaacctcagtcagcagcagacgtca
cgtagccatgtacgggaggtgtttgtacgacaggtgtcttgtgccagtaaacagtgggcc
atacagtctctatccaagtaccataacaatggagtgtgtattgggagtagggagctgctg
caggtgtgtctgaaggcttgtcacctgcccagccagccgtcagctgagggcaatgtcacg
ttctctgatatcccattccaagaaaataagttgtgtagcagtgtgactccgtgtcgagac
ttctatgtgcggtcaggggtgaaattgcaaacactggaggagcagacaacaatggtgtca
ccatcggcccagctagccccgcccaccagggacgaagggcaggattttgcacccctcaat
tgtgctatagacatggacattacccttatcatactgtggcaggctacagtggttgacagt
gcggggacggagtctgtgtgtgttggccagcatcatgtggttgtggaaaagccagacaat
atcttcacttcatacccattccaacatgtacctcgagagcgtgccccagtgaggtttgta
agggaggaggctgctgatgaggagaccaagccggcttttgaggttctcacccagctagtg
tcctacagcctccaacaccccaccaacatctcccatgacttcacaaaggccagggtgtgt
tgtctcggtgtgaagctaaccttccagaacaattcagaggccaccgtcatcgtcctcatc
gacacaagcaaggcacaacaaaggttgagtgagtaccaggagggtggacctgctctggac
acagttgggtctggcttctcctgggtggggcagacacagaggcaggtcagccttgctccc
aaacaggtgttggaggtaccattaactgtgtcattcagtcgtccaggtgtgttcaacatt
aacaacctggctgtgtttgttgcacacactcccgatacatcccagatgaccctccagaaa
cagaccaagcccagcgtcatcactgttgcgaatactggagggagtagggatgtgtga
DBGET
integrated database retrieval system
